RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 UBXN2AP68543 259 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 SMC1AQ14683 1233 aaKnown RBP16.87■□□□□ 0.29
SCAP-207ENST00000441517 CCDC70Q6NSX1 233 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 DPP8Q6V1X1 898 aaPredicted RBP16.87■□□□□ 0.29
SCAP-207ENST00000441517 TMTC3Q6ZXV5 915 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 CNGA4Q8IV77 575 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 VGLL2Q8N8G2 317 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 LRWD1Q9UFC0 647 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 PSDA5PKW4 1024 aaPredicted RBP16.86■□□□□ 0.29
SCAP-207ENST00000441517 POTEMA6NI47 508 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 LDHCP07864 332 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 KRT26Q7Z3Y9 468 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 TC2NQ8N9U0 490 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 ENOX1Q8TC92 643 aaKnown RBP16.86■□□□□ 0.29
SCAP-207ENST00000441517 SNX29Q8TEQ0 813 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 SMCR8Q8TEV9 937 aaPredicted RBP16.86■□□□□ 0.29
SCAP-207ENST00000441517 TIGD1Q96MW7 591 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 C6orf50Q9HD87 102 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 ZBTB21Q9ULJ3 1066 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 NFAT5O94916 1531 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 NTSR2O95665 410 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 NYAP1Q6ZVC0 841 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 ZNF804AQ7Z570 1209 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 NSUN4Q96CB9 384 aaKnown RBP16.86■□□□□ 0.29
SCAP-207ENST00000441517 PDE11AQ9HCR9 933 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 CCDC66A2RUB6 948 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 CAPN2P17655 700 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 CYP4A11Q02928 519 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 PRPF4BQ13523 1007 aaKnown RBP16.86■□□□□ 0.29
SCAP-207ENST00000441517 IFT81Q8WYA0 676 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 DDX41Q9UJV9 622 aaKnown RBP16.86■□□□□ 0.29
SCAP-207ENST00000441517 CDHR2Q9BYE9 1310 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 OVOS2A0A0G2JMS6 1433 aa16.86■□□□□ 0.29
SCAP-207ENST00000441517 LTN1O94822 1766 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 VGLL3A8MV65 326 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 PNMA6AP0CW24 399 aaPredicted RBP16.85■□□□□ 0.29
SCAP-207ENST00000441517 RRAGAQ7L523 313 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 TBCKQ8TEA7 893 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 ARHGEF1Q92888 912 aaKnown RBP16.85■□□□□ 0.29
SCAP-207ENST00000441517 FERMT2Q96AC1 680 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 TMCO5BA8MYB1 307 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 USP8P40818 1118 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 DMTNQ08495 405 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 NKX1-1Q15270 411 aaPredicted RBP16.85■□□□□ 0.29
SCAP-207ENST00000441517 LEKR1Q6ZMV7 388 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 RSPH14Q9UHP6 348 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 TUBE1Q9UJT0 475 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.85■□□□□ 0.29
SCAP-207ENST00000441517 STX10O60499 249 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 PLCG1P19174 1290 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 TMEM266Q2M3C6 531 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 RDH13Q8NBN7 331 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 ANKRD7Q92527 254 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 BCCIPQ9P287 314 aaKnown RBP eCLIP16.85■□□□□ 0.29
SCAP-207ENST00000441517 BCS1LQ9Y276 419 aa16.85■□□□□ 0.29
SCAP-207ENST00000441517 MEIS1O00470 390 aa16.84■□□□□ 0.29
SCAP-207ENST00000441517 PLA2G12BQ9BX93 195 aa16.84■□□□□ 0.29
SCAP-207ENST00000441517 FGFR2P21802 821 aa16.84■□□□□ 0.29
SCAP-207ENST00000441517 TROAPQ12815 778 aa16.84■□□□□ 0.29
SCAP-207ENST00000441517 DCAF17Q5H9S7 520 aaPredicted RBP16.84■□□□□ 0.29
SCAP-207ENST00000441517 NAPGQ99747 312 aaPredicted RBP16.84■□□□□ 0.29
SCAP-207ENST00000441517 INTS13Q9NVM9 706 aa16.84■□□□□ 0.29
SCAP-207ENST00000441517 BSDC1Q9NW68 430 aaPredicted RBP16.84■□□□□ 0.29
SCAP-207ENST00000441517 RMND1Q9NWS8 449 aa16.84■□□□□ 0.29
SCAP-207ENST00000441517 TTF2Q9UNY4 1162 aaKnown RBP16.84■□□□□ 0.29
SCAP-207ENST00000441517 PRPF3O43395 683 aaKnown RBP16.84■□□□□ 0.29
SCAP-207ENST00000441517 TAL1P17542 331 aaPredicted RBP16.84■□□□□ 0.29
SCAP-207ENST00000441517 SLC30A10Q6XR72 485 aa16.84■□□□□ 0.29
SCAP-207ENST00000441517 TMEM47Q9BQJ4 181 aa16.84■□□□□ 0.29
SCAP-207ENST00000441517 SMARCAL1Q9NZC9 954 aa16.84■□□□□ 0.29
SCAP-207ENST00000441517 EPN1Q9Y6I3 576 aaPredicted RBP16.84■□□□□ 0.29
SCAP-207ENST00000441517 USP17L5A8MUK1 530 aa16.83■□□□□ 0.29
SCAP-207ENST00000441517 ACTN4O43707 911 aaKnown RBP16.83■□□□□ 0.29
SCAP-207ENST00000441517 KIF5AQ12840 1032 aa16.83■□□□□ 0.29
SCAP-207ENST00000441517 NONOQ15233 471 aaKnown RBP eCLIP16.83■□□□□ 0.292e-6■■■□□ 18.1
SCAP-207ENST00000441517 TXNRD1Q16881 649 aa16.83■□□□□ 0.29
SCAP-207ENST00000441517 C10orf67Q8IYJ2 551 aa16.83■□□□□ 0.29
SCAP-207ENST00000441517 NYXQ9GZU5 481 aa16.83■□□□□ 0.29
SCAP-207ENST00000441517 ANKRD2Q9GZV1 360 aa16.83■□□□□ 0.29
SCAP-207ENST00000441517 DBNDD1Q9H9R9 158 aa16.83■□□□□ 0.29
SCAP-207ENST00000441517 ABCC12Q96J65 1359 aa16.83■□□□□ 0.28
SCAP-207ENST00000441517 GOLGA6L9A6NEM1 432 aa16.83■□□□□ 0.28
SCAP-207ENST00000441517 CTIFO43310 598 aaKnown RBP16.83■□□□□ 0.28
SCAP-207ENST00000441517 HLTFQ14527 1009 aaKnown RBP eCLIP16.83■□□□□ 0.28
SCAP-207ENST00000441517 PROCA1Q8NCQ7 364 aaPredicted RBP16.83■□□□□ 0.28
SCAP-207ENST00000441517 CAMTA1Q9Y6Y1 1673 aa16.83■□□□□ 0.28
SCAP-207ENST00000441517 KRT79Q5XKE5 535 aa16.83■□□□□ 0.28
SCAP-207ENST00000441517 REXO1Q8N1G1 1221 aaKnown RBP16.83■□□□□ 0.28
SCAP-207ENST00000441517 CCDC43Q96MW1 224 aaKnown RBP16.83■□□□□ 0.28
SCAP-207ENST00000441517 HPSEQ9Y251 543 aa16.83■□□□□ 0.28
SCAP-207ENST00000441517 JCADQ9P266 1359 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 SLC7A5Q01650 507 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 DPYDQ12882 1025 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 RAPGEF1Q13905 1077 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 PKN1Q16512 942 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 HERC4Q5GLZ8 1057 aaPredicted RBP16.82■□□□□ 0.28
SCAP-207ENST00000441517 DNAAF5Q86Y56 855 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 CCDC155Q8N6L0 562 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 TUBGCP2Q9BSJ2 902 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 ZNF287Q9HBT7 754 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms