RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 SAFBQ15424 915 aaKnown RBP eCLIP32.19■■■□□ 2.74
CGREF1-207ENST00000440612 ZYXQ15942 572 aaKnown RBP32.19■■■□□ 2.74
CGREF1-207ENST00000440612 HEATR3Q7Z4Q2 680 aa32.19■■■□□ 2.74
CGREF1-207ENST00000440612 NOSTRINQ8IVI9 506 aa32.19■■■□□ 2.74
CGREF1-207ENST00000440612 USP28Q96RU2 1077 aa32.19■■■□□ 2.74
CGREF1-207ENST00000440612 TMEM232C9JQI7 657 aa32.18■■■□□ 2.74
CGREF1-207ENST00000440612 NCLP19338 710 aaKnown RBP32.18■■■□□ 2.74
CGREF1-207ENST00000440612 FAM83BQ5T0W9 1011 aa32.18■■■□□ 2.74
CGREF1-207ENST00000440612 SEC63Q9UGP8 760 aaKnown RBP32.18■■■□□ 2.74
CGREF1-207ENST00000440612 PNMA6FA0A0J9YX94 578 aa32.18■■■□□ 2.74
CGREF1-207ENST00000440612 FAM177A1Q8N128 213 aaPredicted RBP32.18■■■□□ 2.74
CGREF1-207ENST00000440612 PHIPQ8WWQ0 1821 aa32.17■■■□□ 2.74
CGREF1-207ENST00000440612 ATL3Q6DD88 541 aa32.17■■■□□ 2.74
CGREF1-207ENST00000440612 RRAGCQ9HB90 399 aa32.17■■■□□ 2.74
CGREF1-207ENST00000440612 PICK1Q9NRD5 415 aa32.17■■■□□ 2.74
CGREF1-207ENST00000440612 SNCAIPQ9Y6H5 919 aa32.17■■■□□ 2.74
CGREF1-207ENST00000440612 ZBTB5O15062 677 aa32.16■■■□□ 2.74
CGREF1-207ENST00000440612 KRT2P35908 639 aa32.16■■■□□ 2.74
CGREF1-207ENST00000440612 NLRP5P59047 1200 aa32.16■■■□□ 2.74
CGREF1-207ENST00000440612 M0R2N6 131 aa32.15■■■□□ 2.74
CGREF1-207ENST00000440612 MAP3K9P80192 1104 aa32.15■■■□□ 2.74
CGREF1-207ENST00000440612 DGKZQ13574 1117 aa32.15■■■□□ 2.74
CGREF1-207ENST00000440612 VGLL4Q14135 290 aa32.15■■■□□ 2.74
CGREF1-207ENST00000440612 EARS2Q5JPH6 523 aaKnown RBP32.15■■■□□ 2.74
CGREF1-207ENST00000440612 SYDE2Q5VT97 1194 aa32.15■■■□□ 2.74
CGREF1-207ENST00000440612 LEO1Q8WVC0 666 aaPredicted RBP32.15■■■□□ 2.74
CGREF1-207ENST00000440612 FEZ1Q99689 392 aa32.15■■■□□ 2.74
CGREF1-207ENST00000440612 EMILIN3Q9NT22 766 aa32.15■■■□□ 2.74
CGREF1-207ENST00000440612 ISY1Q9ULR0 285 aaKnown RBP32.15■■■□□ 2.74
CGREF1-207ENST00000440612 GADD45BO75293 160 aaPredicted RBP32.15■■■□□ 2.74
CGREF1-207ENST00000440612 SPP2Q13103 211 aa32.15■■■□□ 2.74
CGREF1-207ENST00000440612 ZNF396Q96N95 335 aaPredicted RBP32.15■■■□□ 2.74
CGREF1-207ENST00000440612 ZMYND12Q9H0C1 365 aa32.15■■■□□ 2.74
CGREF1-207ENST00000440612 OTOFQ9HC10 1997 aa32.14■■■□□ 2.74
CGREF1-207ENST00000440612 hCG_1984214I3L0E3 225 aa32.14■■■□□ 2.74
CGREF1-207ENST00000440612 PPP1R12BO60237 982 aaPredicted RBP32.14■■■□□ 2.74
CGREF1-207ENST00000440612 PLA2G6O60733 806 aa32.14■■■□□ 2.74
CGREF1-207ENST00000440612 PTMSP20962 102 aa32.14■■■□□ 2.74
CGREF1-207ENST00000440612 MTMR2Q13614 643 aa32.14■■■□□ 2.74
CGREF1-207ENST00000440612 QRICH1Q2TAL8 776 aa32.14■■■□□ 2.74
CGREF1-207ENST00000440612 NOM1Q5C9Z4 860 aaKnown RBP32.14■■■□□ 2.74
CGREF1-207ENST00000440612 ZNF713Q8N859 430 aaPredicted RBP32.14■■■□□ 2.74
CGREF1-207ENST00000440612 DAGLBQ8NCG7 672 aa32.14■■■□□ 2.74
CGREF1-207ENST00000440612 ZNF280CQ8ND82 737 aa32.14■■■□□ 2.74
CGREF1-207ENST00000440612 SCAND2PQ9GZW5 306 aaPredicted RBP32.14■■■□□ 2.74
CGREF1-207ENST00000440612 CFAP45Q9UL16 551 aa32.14■■■□□ 2.74
CGREF1-207ENST00000440612 PRR12Q9ULL5 1215 aa32.14■■■□□ 2.74
CGREF1-207ENST00000440612 ZHX2Q9Y6X8 837 aa32.14■■■□□ 2.74
CGREF1-207ENST00000440612 ELP1O95163 1332 aa32.13■■■□□ 2.73
CGREF1-207ENST00000440612 TOB1P50616 345 aaPredicted RBP32.13■■■□□ 2.73
CGREF1-207ENST00000440612 GNL2Q13823 731 aaKnown RBP32.13■■■□□ 2.73
CGREF1-207ENST00000440612 CCDC148Q8NFR7 591 aa32.13■■■□□ 2.73
CGREF1-207ENST00000440612 LPAR1Q92633 364 aa32.13■■■□□ 2.73
CGREF1-207ENST00000440612 COA7Q96BR5 231 aa32.13■■■□□ 2.73
CGREF1-207ENST00000440612 RTEL1Q9NZ71 1219 aa32.13■■■□□ 2.73
CGREF1-207ENST00000440612 RCOR1Q9UKL0 485 aa32.13■■■□□ 2.73
CGREF1-207ENST00000440612 PCDHA4Q9UN74 947 aa32.13■■■□□ 2.73
CGREF1-207ENST00000440612 FAM205CA6NFA0 338 aa32.12■■■□□ 2.73
CGREF1-207ENST00000440612 TRAK2O60296 914 aa32.12■■■□□ 2.73
CGREF1-207ENST00000440612 CALML3P27482 149 aa32.12■■■□□ 2.73
CGREF1-207ENST00000440612 STAT2P52630 851 aa32.12■■■□□ 2.73
CGREF1-207ENST00000440612 BACE1P56817 501 aa32.12■■■□□ 2.73
CGREF1-207ENST00000440612 MAP3K11Q16584 847 aa32.12■■■□□ 2.73
CGREF1-207ENST00000440612 MAP1SQ66K74 1059 aaPredicted RBP32.12■■■□□ 2.73
CGREF1-207ENST00000440612 NAPAP54920 295 aa32.11■■■□□ 2.73
CGREF1-207ENST00000440612 CDC37Q16543 378 aaPredicted RBP32.11■■■□□ 2.73
CGREF1-207ENST00000440612 MOB2Q70IA6 237 aa32.11■■■□□ 2.73
CGREF1-207ENST00000440612 BLIDQ8IZY5 108 aa32.11■■■□□ 2.73
CGREF1-207ENST00000440612 AS3MTQ9HBK9 375 aa32.11■■■□□ 2.73
CGREF1-207ENST00000440612 AFG3L2Q9Y4W6 797 aa32.11■■■□□ 2.73
CGREF1-207ENST00000440612 CLIC4Q9Y696 253 aa32.11■■■□□ 2.73
CGREF1-207ENST00000440612 ESYT2A0FGR8 921 aa32.11■■■□□ 2.73
CGREF1-207ENST00000440612 CEBPZQ03701 1054 aaKnown RBP32.11■■■□□ 2.73
CGREF1-207ENST00000440612 GALNT17Q6IS24 598 aa32.11■■■□□ 2.73
CGREF1-207ENST00000440612 GPT2Q8TD30 523 aa32.11■■■□□ 2.73
CGREF1-207ENST00000440612 SPATA32Q96LK8 384 aa32.11■■■□□ 2.73
CGREF1-207ENST00000440612 POLR3EQ9NVU0 708 aa32.11■■■□□ 2.73
CGREF1-207ENST00000440612 CLEC11AQ9Y240 323 aa32.11■■■□□ 2.73
CGREF1-207ENST00000440612 WDR46O15213 610 aaKnown RBP32.1■■■□□ 2.73
CGREF1-207ENST00000440612 NASPP49321 788 aaPredicted RBP32.1■■■□□ 2.73
CGREF1-207ENST00000440612 SNAP25P60880 206 aa32.1■■■□□ 2.73
CGREF1-207ENST00000440612 FBXO28Q9NVF7 368 aa32.1■■■□□ 2.73
CGREF1-207ENST00000440612 IREB2P48200 963 aaKnown RBP32.09■■■□□ 2.73
CGREF1-207ENST00000440612 BRMS1Q9HCU9 246 aa32.09■■■□□ 2.73
CGREF1-207ENST00000440612 NMRK2Q9NPI5 230 aa32.09■■■□□ 2.73
CGREF1-207ENST00000440612 TRIM75PA6NK02 468 aa32.08■■■□□ 2.73
CGREF1-207ENST00000440612 TRAF5O00463 557 aa32.08■■■□□ 2.73
CGREF1-207ENST00000440612 VCAM1P19320 739 aa32.08■■■□□ 2.73
CGREF1-207ENST00000440612 NF2P35240 595 aa32.08■■■□□ 2.73
CGREF1-207ENST00000440612 FMR1Q06787 632 aaKnown RBP eCLIP32.08■■■□□ 2.73
CGREF1-207ENST00000440612 CCDC12Q8WUD4 166 aaPredicted RBP32.08■■■□□ 2.73
CGREF1-207ENST00000440612 C12orf42Q96LP6 360 aa32.08■■■□□ 2.73
CGREF1-207ENST00000440612 FEM1BQ9UK73 627 aa32.08■■■□□ 2.73
CGREF1-207ENST00000440612 SMCO2A6NFE2 343 aa32.08■■■□□ 2.73
CGREF1-207ENST00000440612 USP14P54578 494 aa32.08■■■□□ 2.73
CGREF1-207ENST00000440612 IKQ13123 557 aaPredicted RBP32.08■■■□□ 2.73
CGREF1-207ENST00000440612 ANO1Q5XXA6 986 aa32.08■■■□□ 2.73
CGREF1-207ENST00000440612 PPP1R18Q6NYC8 613 aa32.08■■■□□ 2.73
CGREF1-207ENST00000440612 LINC00301Q8NCQ3 95 aa32.08■■■□□ 2.73
CGREF1-207ENST00000440612 CHURC1Q8WUH1 139 aa32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms