RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 RIOX2Q8IUF8 465 aa15.64■□□□□ 0.09
LINC00399-201ENST00000439008 SHCBP1Q8NEM2 672 aa15.64■□□□□ 0.09
LINC00399-201ENST00000439008 ANKS1AQ92625 1134 aa15.64■□□□□ 0.09
LINC00399-201ENST00000439008 SHISA4Q96DD7 197 aa15.64■□□□□ 0.09
LINC00399-201ENST00000439008 SLC38A10Q9HBR0 1119 aa15.64■□□□□ 0.09
LINC00399-201ENST00000439008 RAVER2Q9HCJ3 691 aaKnown RBP15.64■□□□□ 0.09
LINC00399-201ENST00000439008 FEM1BQ9UK73 627 aa15.64■□□□□ 0.09
LINC00399-201ENST00000439008 ZNF536O15090 1300 aa15.64■□□□□ 0.09
LINC00399-201ENST00000439008 SNHG28P0DPA3 235 aa15.63■□□□□ 0.09
LINC00399-201ENST00000439008 PDHBP11177 359 aa15.63■□□□□ 0.09
LINC00399-201ENST00000439008 XRCC5P13010 732 aaKnown RBP15.63■□□□□ 0.09
LINC00399-201ENST00000439008 SLC16A2P36021 539 aa15.63■□□□□ 0.09
LINC00399-201ENST00000439008 STAT3P40763 770 aa15.63■□□□□ 0.09
LINC00399-201ENST00000439008 ANTXR2P58335 489 aa15.63■□□□□ 0.09
LINC00399-201ENST00000439008 NECTIN1Q15223 517 aa15.63■□□□□ 0.09
LINC00399-201ENST00000439008 SEC23AQ15436 765 aa15.63■□□□□ 0.09
LINC00399-201ENST00000439008 NCAPG2Q86XI2 1143 aa15.63■□□□□ 0.09
LINC00399-201ENST00000439008 SOCS4Q8WXH5 440 aa15.63■□□□□ 0.09
LINC00399-201ENST00000439008 TTC14Q96N46 770 aa15.63■□□□□ 0.09
LINC00399-201ENST00000439008 ZSCAN10Q96SZ4 725 aaPredicted RBP15.63■□□□□ 0.09
LINC00399-201ENST00000439008 BIN2Q9UBW5 565 aaPredicted RBP15.63■□□□□ 0.09
LINC00399-201ENST00000439008 FRMPD2Q68DX3 1309 aaPredicted RBP15.63■□□□□ 0.09
LINC00399-201ENST00000439008 PDE4DIPQ5VU43 2346 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 SLC27A2O14975 620 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 PLA2G6O60733 806 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 CDC45O75419 566 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 ADORA2AP29274 412 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 PPP4R3BQ5MIZ7 849 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 MAP3K21Q5TCX8 1036 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 CHST3Q7LGC8 479 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 DGKHQ86XP1 1220 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 CCAR1Q8IX12 1150 aaKnown RBP15.62■□□□□ 0.09
LINC00399-201ENST00000439008 CPXCR1Q8N123 301 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 DCAF4Q8WV16 495 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 KRT23Q9C075 422 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 CPVLQ9H3G5 476 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 GPCPD1Q9NPB8 672 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 GPHNQ9NQX3 736 aaPredicted RBP15.62■□□□□ 0.09
LINC00399-201ENST00000439008 PRR12Q9ULL5 1215 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 PLXNA1Q9UIW2 1896 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 TNKSO95271 1327 aa15.62■□□□□ 0.09
LINC00399-201ENST00000439008 ATP2A1O14983 1001 aa15.61■□□□□ 0.09
LINC00399-201ENST00000439008 HMGCRP04035 888 aa15.61■□□□□ 0.09
LINC00399-201ENST00000439008 HOXC6P09630 235 aa15.61■□□□□ 0.09
LINC00399-201ENST00000439008 RGS2P41220 211 aa15.61■□□□□ 0.09
LINC00399-201ENST00000439008 STAT2P52630 851 aa15.61■□□□□ 0.09
LINC00399-201ENST00000439008 ZNF543Q08ER8 600 aa15.61■□□□□ 0.09
LINC00399-201ENST00000439008 CCDC96Q2M329 555 aa15.61■□□□□ 0.09
LINC00399-201ENST00000439008 SNRNP48Q6IEG0 339 aaKnown RBP15.61■□□□□ 0.09
LINC00399-201ENST00000439008 BTNL9Q6UXG8 535 aa15.61■□□□□ 0.09
LINC00399-201ENST00000439008 MB21D2Q8IYB1 491 aaPredicted RBP15.61■□□□□ 0.09
LINC00399-201ENST00000439008 AGBL1Q96MI9 1066 aa15.61■□□□□ 0.09
LINC00399-201ENST00000439008 APBA2Q99767 749 aa15.61■□□□□ 0.09
LINC00399-201ENST00000439008 MROH8Q9H579 483 aa15.61■□□□□ 0.09
LINC00399-201ENST00000439008 CNNM2Q9H8M5 875 aa15.61■□□□□ 0.09
LINC00399-201ENST00000439008 ANO2Q9NQ90 1003 aa15.61■□□□□ 0.09
LINC00399-201ENST00000439008 ISY1Q9ULR0 285 aaKnown RBP15.61■□□□□ 0.09
LINC00399-201ENST00000439008 SLC25A27O95847 323 aa15.6■□□□□ 0.09
LINC00399-201ENST00000439008 PGK2P07205 417 aa15.6■□□□□ 0.09
LINC00399-201ENST00000439008 GOLGA8HP0CJ92 632 aa15.6■□□□□ 0.09
LINC00399-201ENST00000439008 CACNB2Q08289 660 aaPredicted RBP15.6■□□□□ 0.09
LINC00399-201ENST00000439008 CREB3L3Q68CJ9 461 aa15.6■□□□□ 0.09
LINC00399-201ENST00000439008 FAM160B2Q86V87 743 aa15.6■□□□□ 0.09
LINC00399-201ENST00000439008 IQCA1Q86XH1 822 aa15.6■□□□□ 0.09
LINC00399-201ENST00000439008 PNMA1Q8ND90 353 aa15.6■□□□□ 0.09
LINC00399-201ENST00000439008 CHURC1Q8WUH1 139 aa15.6■□□□□ 0.09
LINC00399-201ENST00000439008 TEX13BQ9BXU2 312 aa15.6■□□□□ 0.09
LINC00399-201ENST00000439008 RNF208Q9H0X6 261 aa15.6■□□□□ 0.09
LINC00399-201ENST00000439008 PAK6Q9NQU5 681 aaPredicted RBP15.6■□□□□ 0.09
LINC00399-201ENST00000439008 IVNS1ABPQ9Y6Y0 642 aa15.6■□□□□ 0.09
LINC00399-201ENST00000439008 LCTP09848 1927 aa15.59■□□□□ 0.09
LINC00399-201ENST00000439008 STRNO43815 780 aa15.59■□□□□ 0.09
LINC00399-201ENST00000439008 ZBED4O75132 1171 aa15.59■□□□□ 0.09
LINC00399-201ENST00000439008 SLC4A3P48751 1232 aa15.59■□□□□ 0.09
LINC00399-201ENST00000439008 UBXN2AP68543 259 aa15.59■□□□□ 0.09
LINC00399-201ENST00000439008 KIAA1211Q6ZU35 1233 aa15.59■□□□□ 0.09
LINC00399-201ENST00000439008 RASEFQ8IZ41 740 aa15.59■□□□□ 0.09
LINC00399-201ENST00000439008 TRPV1Q8NER1 839 aa15.59■□□□□ 0.09
LINC00399-201ENST00000439008 TMEM106CQ9BVX2 250 aa15.59■□□□□ 0.09
LINC00399-201ENST00000439008 CWC22Q9HCG8 908 aaKnown RBP15.59■□□□□ 0.09
LINC00399-201ENST00000439008 BAZ2BQ9UIF8 2168 aaKnown RBP15.59■□□□□ 0.09
LINC00399-201ENST00000439008 GJB1P08034 283 aa15.58■□□□□ 0.08
LINC00399-201ENST00000439008 FCER1AP12319 257 aa15.58■□□□□ 0.08
LINC00399-201ENST00000439008 PRKAR2AP13861 404 aaKnown RBP15.58■□□□□ 0.08
LINC00399-201ENST00000439008 ZKSCAN1P17029 563 aaPredicted RBP15.58■□□□□ 0.08
LINC00399-201ENST00000439008 CCND3P30281 292 aaPredicted RBP15.58■□□□□ 0.08
LINC00399-201ENST00000439008 CYP2C19P33261 490 aa15.58■□□□□ 0.08
LINC00399-201ENST00000439008 IKQ13123 557 aaPredicted RBP15.58■□□□□ 0.08
LINC00399-201ENST00000439008 SLC35G1Q2M3R5 365 aa15.58■□□□□ 0.08
LINC00399-201ENST00000439008 ZNF792Q3KQV3 632 aa15.58■□□□□ 0.08
LINC00399-201ENST00000439008 SYDE2Q5VT97 1194 aa15.58■□□□□ 0.08
LINC00399-201ENST00000439008 CCDC174Q6PII3 467 aa15.58■□□□□ 0.08
LINC00399-201ENST00000439008 ABRAQ8N0Z2 381 aa15.58■□□□□ 0.08
LINC00399-201ENST00000439008 IGDCC4Q8TDY8 1250 aa15.58■□□□□ 0.08
LINC00399-201ENST00000439008 FGD4Q96M96 766 aa15.58■□□□□ 0.08
LINC00399-201ENST00000439008 MMP19Q99542 508 aa15.58■□□□□ 0.08
LINC00399-201ENST00000439008 UBA5Q9GZZ9 404 aa15.58■□□□□ 0.08
LINC00399-201ENST00000439008 DNAH12Q6ZR08 3092 aa15.58■□□□□ 0.08
LINC00399-201ENST00000439008 MCM3APO60318 1980 aa15.58■□□□□ 0.08
LINC00399-201ENST00000439008 DNAJC25-GNG10A0A024R161 153 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms