RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 FBXW10Q5XX13 1052 aa5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 C19orf47Q8N9M1 422 aaKnown RBP5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 OR6P1Q8NGX9 317 aa5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 SYTL4Q96C24 671 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 SHDQ96IW2 340 aa5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 SRRTQ9BXP5 876 aaKnown RBP5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 RNF32Q9H0A6 362 aa5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 CWC22Q9HCG8 908 aaKnown RBP5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 GFOD1Q9NXC2 390 aa5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 FBXL21Q9UKT6 434 aa5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 A0A087WZG4 1122 aa5.5□□□□□ -1.53
HMGB3P12-201ENST00000438745 PSPNO60542 156 aa5.5□□□□□ -1.53
HMGB3P12-201ENST00000438745 SYPP08247 313 aa5.5□□□□□ -1.53
HMGB3P12-201ENST00000438745 RPL10P27635 214 aaKnown RBP5.5□□□□□ -1.53
HMGB3P12-201ENST00000438745 CASP7P55210 303 aa5.5□□□□□ -1.53
HMGB3P12-201ENST00000438745 MPZL3Q6UWV2 235 aa5.5□□□□□ -1.53
HMGB3P12-201ENST00000438745 CCDC81Q6ZN84 652 aa5.5□□□□□ -1.53
HMGB3P12-201ENST00000438745 CILP2Q8IUL8 1156 aa5.5□□□□□ -1.53
HMGB3P12-201ENST00000438745 CCDC144CPQ8IYA2 1237 aa5.5□□□□□ -1.53
HMGB3P12-201ENST00000438745 MAP6Q96JE9 813 aa5.5□□□□□ -1.53
HMGB3P12-201ENST00000438745 CRBNQ96SW2 442 aa5.5□□□□□ -1.53
HMGB3P12-201ENST00000438745 ACBD3Q9H3P7 528 aa5.5□□□□□ -1.53
HMGB3P12-201ENST00000438745 YBX2Q9Y2T7 364 aaKnown RBP5.5□□□□□ -1.53
HMGB3P12-201ENST00000438745 SLC12A7Q9Y666 1083 aa5.5□□□□□ -1.53
HMGB3P12-201ENST00000438745 A0A1W2PQH9 124 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 FADS2P1A8MWK0 482 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 NRDCO43847 1150 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 EFEMP2O95967 443 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 GSNP06396 782 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 VAV1P15498 845 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 CD247P20963 164 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 NASPP49321 788 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 ZNF445P59923 1031 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 DCAF15Q66K64 600 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 ZPBP2Q6X784 338 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 WAPLQ7Z5K2 1190 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 NLRX1Q86UT6 975 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 IRF2BP1Q8IU81 584 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 TMEM52Q8NDY8 209 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 HHIPL1Q96JK4 782 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 GP6Q9HCN6 339 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 TNFRSF10DQ9UBN6 386 aa5.49□□□□□ -1.53
HMGB3P12-201ENST00000438745 CECR2Q9BXF3 1484 aa5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 SSU72P8A0A1W2PR75 194 aa5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 FAM86C2PA6NEL3 165 aa5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 CBFA2T2O43439 604 aa5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 ATF4P18848 351 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 ENDOUP21128 410 aaKnown RBP5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 RTP2Q5QGT7 225 aa5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 TDRD10Q5VZ19 366 aaKnown RBP5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 NPM2Q86SE8 214 aaKnown RBP5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 KSR1Q8IVT5 923 aa5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 FBXO15Q8NCQ5 510 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 FCRL2Q96LA5 508 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 SLC38A3Q99624 504 aa5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 ZNF552Q9H707 407 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 PHAXQ9H814 394 aaKnown RBP5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 CRTAC1Q9NQ79 661 aa5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 ZMYM5Q9UJ78 669 aa5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 ZNF451Q9Y4E5 1061 aa5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 FHOD1Q9Y613 1164 aa5.48□□□□□ -1.53
HMGB3P12-201ENST00000438745 DBX1A6NMT0 343 aa5.47□□□□□ -1.53
HMGB3P12-201ENST00000438745 TP53P04637 393 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P12-201ENST00000438745 SYDE1Q6ZW31 735 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P12-201ENST00000438745 INTS4Q96HW7 963 aaKnown RBP5.47□□□□□ -1.53
HMGB3P12-201ENST00000438745 SLC12A9Q9BXP2 914 aa5.47□□□□□ -1.53
HMGB3P12-201ENST00000438745 SLC6A17Q9H1V8 727 aa5.47□□□□□ -1.53
HMGB3P12-201ENST00000438745 NSUN3Q9H649 340 aaKnown RBP5.47□□□□□ -1.53
HMGB3P12-201ENST00000438745 ERVK13-1Q9NX77 482 aa5.47□□□□□ -1.53
HMGB3P12-201ENST00000438745 STRIP2Q9ULQ0 834 aa5.47□□□□□ -1.53
HMGB3P12-201ENST00000438745 INPP5FQ9Y2H2 1132 aa5.47□□□□□ -1.53
HMGB3P12-201ENST00000438745 DIS3Q9Y2L1 958 aaKnown RBP5.47□□□□□ -1.53
HMGB3P12-201ENST00000438745 RB1CC1Q8TDY2 1594 aa5.46□□□□□ -1.53
HMGB3P12-201ENST00000438745 PEX10O60683 326 aa5.46□□□□□ -1.54
HMGB3P12-201ENST00000438745 USP2O75604 605 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P12-201ENST00000438745 TSPAN15O95858 294 aa5.46□□□□□ -1.54
HMGB3P12-201ENST00000438745 MED14OSP0DP75 135 aa5.46□□□□□ -1.54
HMGB3P12-201ENST00000438745 CRTC3Q6UUV7 619 aa5.46□□□□□ -1.54
HMGB3P12-201ENST00000438745 FAM169BQ8N8A8 192 aa5.46□□□□□ -1.54
HMGB3P12-201ENST00000438745 KLHL6Q8WZ60 621 aa5.46□□□□□ -1.54
HMGB3P12-201ENST00000438745 DIRC2Q96SL1 478 aa5.46□□□□□ -1.54
HMGB3P12-201ENST00000438745 PPP1R16BQ96T49 567 aa5.46□□□□□ -1.54
HMGB3P12-201ENST00000438745 KLHL25Q9H0H3 589 aa5.46□□□□□ -1.54
HMGB3P12-201ENST00000438745 EPB41L4BQ9H329 900 aa5.46□□□□□ -1.54
HMGB3P12-201ENST00000438745 KCNK12Q9HB15 430 aa5.46□□□□□ -1.54
HMGB3P12-201ENST00000438745 DCP1AQ9NPI6 582 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P12-201ENST00000438745 IGSF5Q9NSI5 407 aa5.46□□□□□ -1.54
HMGB3P12-201ENST00000438745 MYOCOSA0A1B0GUC4 107 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 A0A1W2PQ45 241 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 A0A1W2PQY0 241 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 H0Y8X5 98 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 MEIS1O00470 390 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 FKTNO75072 461 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 PNLIPP16233 465 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 NOP2P46087 812 aaKnown RBP5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 RTP1P59025 263 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 TCEAL1Q15170 157 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 GNPTABQ3T906 1256 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 NOL9Q5SY16 702 aaKnown RBP5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 CEP128Q6ZU80 1094 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms