RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 PKP1Q13835 747 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 VGLL4Q14135 290 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 ASPRV1Q53RT3 343 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 ADGRD1Q6QNK2 874 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 USP17L2Q6R6M4 530 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 CMTR1Q8N1G2 835 aaKnown RBP11.28□□□□□ -0.6
CUBN-204ENST00000438254 RGS22Q8NE09 1264 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 DCAF4Q8WV16 495 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 SPZ1Q9BXG8 430 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 RNF26Q9BY78 433 aaPredicted RBP11.28□□□□□ -0.6
CUBN-204ENST00000438254 KIAA1683Q9H0B3 1180 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 VCPKMTQ9H867 229 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 ARHGEF10LQ9HCE6 1279 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 ZDHHC9Q9Y397 364 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 UNCXA6NJT0 531 aa11.27□□□□□ -0.61
CUBN-204ENST00000438254 CPLX1O14810 134 aa11.27□□□□□ -0.61
CUBN-204ENST00000438254 PRPF3O43395 683 aaKnown RBP11.27□□□□□ -0.61
CUBN-204ENST00000438254 PARP1P09874 1014 aaKnown RBP11.27□□□□□ -0.61
CUBN-204ENST00000438254 NF2P35240 595 aa11.27□□□□□ -0.61
CUBN-204ENST00000438254 GNAQP50148 359 aa11.27□□□□□ -0.61
CUBN-204ENST00000438254 PKN1Q16512 942 aa11.27□□□□□ -0.61
CUBN-204ENST00000438254 GPATCH4Q5T3I0 446 aaKnown RBP11.27□□□□□ -0.61
CUBN-204ENST00000438254 SLFN13Q68D06 897 aa11.27□□□□□ -0.61
CUBN-204ENST00000438254 BTNL9Q6UXG8 535 aa11.27□□□□□ -0.61
CUBN-204ENST00000438254 MOB2Q70IA6 237 aa11.27□□□□□ -0.61
CUBN-204ENST00000438254 ZNF526Q8TF50 670 aaPredicted RBP11.27□□□□□ -0.61
CUBN-204ENST00000438254 PHKBQ93100 1093 aa11.27□□□□□ -0.61
CUBN-204ENST00000438254 SHISA4Q96DD7 197 aa11.27□□□□□ -0.61
CUBN-204ENST00000438254 MTMR8Q96EF0 704 aa11.27□□□□□ -0.61
CUBN-204ENST00000438254 C12orf42Q96LP6 360 aa11.27□□□□□ -0.61
CUBN-204ENST00000438254 LZTS2Q9BRK4 669 aa11.27□□□□□ -0.61
CUBN-204ENST00000438254 RIOX1Q9H6W3 641 aa11.27□□□□□ -0.61
CUBN-204ENST00000438254 AFG3L2Q9Y4W6 797 aa11.27□□□□□ -0.61
CUBN-204ENST00000438254 KLRF2D3W0D1 207 aa11.26□□□□□ -0.61
CUBN-204ENST00000438254 TK2O00142 265 aa11.26□□□□□ -0.61
CUBN-204ENST00000438254 BRD1O95696 1058 aa11.26□□□□□ -0.61
CUBN-204ENST00000438254 GOLGA8HP0CJ92 632 aa11.26□□□□□ -0.61
CUBN-204ENST00000438254 SYT1P21579 422 aa11.26□□□□□ -0.61
CUBN-204ENST00000438254 IREB2P48200 963 aaKnown RBP11.26□□□□□ -0.61
CUBN-204ENST00000438254 FKBP1BP68106 108 aa11.26□□□□□ -0.61
CUBN-204ENST00000438254 ATP2B2Q01814 1243 aa11.26□□□□□ -0.61
CUBN-204ENST00000438254 CPLX2Q6PUV4 134 aaKnown RBP11.26□□□□□ -0.61
CUBN-204ENST00000438254 ANKRD13AQ8IZ07 590 aa11.26□□□□□ -0.61
CUBN-204ENST00000438254 ZNF280CQ8ND82 737 aa11.26□□□□□ -0.61
CUBN-204ENST00000438254 DDX11Q96FC9 970 aa11.26□□□□□ -0.61
CUBN-204ENST00000438254 AIFM3Q96NN9 605 aa11.26□□□□□ -0.61
CUBN-204ENST00000438254 SH2D4AQ9H788 454 aa11.26□□□□□ -0.61
CUBN-204ENST00000438254 CHMP5Q9NZZ3 219 aa11.26□□□□□ -0.61
CUBN-204ENST00000438254 ORC3Q9UBD5 711 aaPredicted RBP11.26□□□□□ -0.61
CUBN-204ENST00000438254 MTMR6Q9Y217 621 aa11.26□□□□□ -0.61
CUBN-204ENST00000438254 PASKQ96RG2 1323 aa11.26□□□□□ -0.61
CUBN-204ENST00000438254 PTPRFP10586 1907 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 SPDYE5A6NIY4 337 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 USP17L10C9JJH3 530 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 PLA2G6O60733 806 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 PPFIA3O75145 1194 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 DEXIO95424 95 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 SLC1A4P43007 532 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 BACE1P56817 501 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 SSRP1Q08945 709 aaKnown RBP11.25□□□□□ -0.61
CUBN-204ENST00000438254 SPP2Q13103 211 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 PRKG1Q13976 671 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 SH3D19Q5HYK7 790 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 CST9Q5W186 159 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 TTBK2Q6IQ55 1244 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 LPAR1Q92633 364 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 CLMNQ96JQ2 1002 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 SLC26A6Q9BXS9 759 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 CPVLQ9H3G5 476 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 AS3MTQ9HBK9 375 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 GOPCQ9HD26 462 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 PICK1Q9NRD5 415 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 EMILIN3Q9NT22 766 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 ZHX2Q9Y6X8 837 aa11.25□□□□□ -0.61
CUBN-204ENST00000438254 FRMPD2Q68DX3 1309 aaPredicted RBP11.25□□□□□ -0.61
CUBN-204ENST00000438254 LOC285556D6RIA3 1793 aa11.24□□□□□ -0.61
CUBN-204ENST00000438254 TRPM7Q96QT4 1865 aa11.24□□□□□ -0.61
CUBN-204ENST00000438254 STX6O43752 255 aa11.24□□□□□ -0.61
CUBN-204ENST00000438254 BMP3P12645 472 aa11.24□□□□□ -0.61
CUBN-204ENST00000438254 PDIA4P13667 645 aaKnown RBP11.24□□□□□ -0.61
CUBN-204ENST00000438254 PPATQ06203 517 aa11.24□□□□□ -0.61
CUBN-204ENST00000438254 MTMR2Q13614 643 aa11.24□□□□□ -0.61
CUBN-204ENST00000438254 PFKFB3Q16875 520 aaPredicted RBP11.24□□□□□ -0.61
CUBN-204ENST00000438254 KCTD1Q719H9 257 aa11.24□□□□□ -0.61
CUBN-204ENST00000438254 ARMC9Q7Z3E5 817 aa11.24□□□□□ -0.61
CUBN-204ENST00000438254 ERO1BQ86YB8 467 aa11.24□□□□□ -0.61
CUBN-204ENST00000438254 CCDC82Q8N4S0 544 aa11.24□□□□□ -0.61
CUBN-204ENST00000438254 FBXO18Q8NFZ0 1043 aa11.24□□□□□ -0.61
CUBN-204ENST00000438254 NUP88Q99567 741 aaPredicted RBP11.24□□□□□ -0.61
CUBN-204ENST00000438254 UBA5Q9GZZ9 404 aa11.24□□□□□ -0.61
CUBN-204ENST00000438254 JMJD4Q9H9V9 463 aa11.24□□□□□ -0.61
CUBN-204ENST00000438254 GPBP1L1Q9HC44 474 aaPredicted RBP11.24□□□□□ -0.61
CUBN-204ENST00000438254 GBA2Q9HCG7 927 aaPredicted RBP11.24□□□□□ -0.61
CUBN-204ENST00000438254 RBM27Q9P2N5 1060 aaKnown RBP11.24□□□□□ -0.61
CUBN-204ENST00000438254 KCNH4Q9UQ05 1017 aa11.24□□□□□ -0.61
CUBN-204ENST00000438254 CSADQ9Y600 493 aa11.24□□□□□ -0.61
CUBN-204ENST00000438254 V9GY48 417 aaPredicted RBP11.24□□□□□ -0.61
CUBN-204ENST00000438254 PARP14Q460N5 1801 aa11.23□□□□□ -0.61
CUBN-204ENST00000438254 RLFQ13129 1914 aa11.23□□□□□ -0.61
CUBN-204ENST00000438254 C19orf81C9J6K1 198 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms