RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 MTIF2P46199 727 aaKnown RBP18.83■□□□□ 0.61
TTC3-209ENST00000438055 TCP11X2Q5H9J9 407 aa18.83■□□□□ 0.61
TTC3-209ENST00000438055 CDKAL1Q5VV42 579 aa18.83■□□□□ 0.61
TTC3-209ENST00000438055 SEC63Q9UGP8 760 aaKnown RBP18.83■□□□□ 0.61
TTC3-209ENST00000438055 TTF2Q9UNY4 1162 aaKnown RBP18.83■□□□□ 0.61
TTC3-209ENST00000438055 MYH3P11055 1940 aa18.83■□□□□ 0.61
TTC3-209ENST00000438055 IL17AQ16552 155 aa18.83■□□□□ 0.61
TTC3-209ENST00000438055 SLC51AQ86UW1 340 aa18.83■□□□□ 0.61
TTC3-209ENST00000438055 PARP1P09874 1014 aaKnown RBP18.83■□□□□ 0.6
TTC3-209ENST00000438055 ATP2B2Q01814 1243 aa18.83■□□□□ 0.6
TTC3-209ENST00000438055 RASGRP2Q7LDG7 609 aa18.83■□□□□ 0.6
TTC3-209ENST00000438055 TMEM60Q9H2L4 133 aa18.83■□□□□ 0.6
TTC3-209ENST00000438055 DISC1Q9NRI5 854 aa18.83■□□□□ 0.6
TTC3-209ENST00000438055 CCNL1Q9UK58 526 aaPredicted RBP18.83■□□□□ 0.6
TTC3-209ENST00000438055 KLRF2D3W0D1 207 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 TNFRSF25Q93038 417 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 ZNHIT6Q9NWK9 470 aaKnown RBP18.82■□□□□ 0.6
TTC3-209ENST00000438055 THRAP3Q9Y2W1 955 aaKnown RBP18.82■□□□□ 0.6
TTC3-209ENST00000438055 MYH2Q9UKX2 1941 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 CSGALNACT2Q8N6G5 542 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 CEP112Q8N8E3 955 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 RABGGTAQ92696 567 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 CDK5RAP3Q96JB5 506 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 ABHD10Q9NUJ1 306 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 CTAGE15A4D2H0 777 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 CTAGE8P0CG41 777 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 CC2D1AQ6P1N0 951 aaPredicted RBP18.82■□□□□ 0.6
TTC3-209ENST00000438055 PDXDC2PQ6P474 469 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 CTAGE6Q86UF2 777 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 CTAGE4Q8IX94 777 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 MTRQ99707 1265 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 NAPGQ99747 312 aaPredicted RBP18.82■□□□□ 0.6
TTC3-209ENST00000438055 EXOC1Q9NV70 894 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 CDC23Q9UJX2 597 aa18.82■□□□□ 0.6
TTC3-209ENST00000438055 CCDC66A2RUB6 948 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 OAS2P29728 719 aaKnown RBP18.81■□□□□ 0.6
TTC3-209ENST00000438055 PDE4DQ08499 809 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 CT47A1Q5JQC4 288 aaPredicted RBP18.81■□□□□ 0.6
TTC3-209ENST00000438055 RCSD1Q6JBY9 416 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 ITGB4P16144 1822 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 EIF6P56537 245 aaKnown RBP18.81■□□□□ 0.6
TTC3-209ENST00000438055 TYW1BQ6NUM6 668 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 SRGAP1Q7Z6B7 1085 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 WDR66Q8TBY9 1149 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 CAGE1Q8TC20 777 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 KIFC2Q96AC6 838 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 TRERF1Q96PN7 1200 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 CHP1Q99653 195 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 ENC1O14682 589 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 IDEP14735 1019 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 PLA2G4AP47712 749 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 SMC1AQ14683 1233 aaKnown RBP18.81■□□□□ 0.6
TTC3-209ENST00000438055 USP17L2Q6R6M4 530 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 CCDC51Q96ER9 411 aa18.81■□□□□ 0.6
TTC3-209ENST00000438055 SHANK3Q9BYB0 1731 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 LDHCP07864 332 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 GPS2Q13227 327 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 E2F4Q16254 413 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 C12orf60Q5U649 245 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 APTXQ7Z2E3 356 aaKnown RBP18.8■□□□□ 0.6
TTC3-209ENST00000438055 TEX11Q8IYF3 940 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 CAPZA3Q96KX2 299 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 UBA5Q9GZZ9 404 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 IL17RBQ9NRM6 502 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 ERLIN1O75477 346 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 ABL1P00519 1130 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 TECP42680 631 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 ARL6IP4Q66PJ3 421 aaKnown RBP18.8■□□□□ 0.6
TTC3-209ENST00000438055 CABP7Q86V35 215 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 DGKHQ86XP1 1220 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 UIMC1Q96RL1 719 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 F8W031 263 aaPredicted RBP18.8■□□□□ 0.6
TTC3-209ENST00000438055 H7C1D1 291 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 TXKP42681 527 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 TBC1D8BQ0IIM8 1120 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 PICALMQ13492 652 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 RPGRQ92834 1020 aaKnown RBP18.8■□□□□ 0.6
TTC3-209ENST00000438055 TMEM47Q9BQJ4 181 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 NARFQ9UHQ1 456 aa18.8■□□□□ 0.6
TTC3-209ENST00000438055 EPN1Q9Y6I3 576 aaPredicted RBP18.8■□□□□ 0.6
TTC3-209ENST00000438055 SMCO2A6NFE2 343 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 B4DLN1 442 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 RNF225M0QZC1 329 aaPredicted RBP18.79■□□□□ 0.6
TTC3-209ENST00000438055 ERVK-24P63145 666 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 GSTO1P78417 241 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 CCDC122Q5T0U0 273 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 ZNF804AQ7Z570 1209 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 EYA3Q99504 573 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 ZNF287Q9HBT7 754 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 BIN2Q9UBW5 565 aaPredicted RBP18.79■□□□□ 0.6
TTC3-209ENST00000438055 SSBP05455 408 aaKnown RBP eCLIP18.79■□□□□ 0.6
TTC3-209ENST00000438055 GYS2P54840 703 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 NFIXQ14938 502 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 OR8K1Q8NGG5 319 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 TRIM10Q9UDY6 481 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 TFR2Q9UP52 801 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 BAZ2AQ9UIF9 1905 aaKnown RBP18.79■□□□□ 0.6
TTC3-209ENST00000438055 TTC26A0AVF1 554 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 UFL1O94874 794 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 LONRF2Q1L5Z9 754 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms