RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 EFCAB14O75071 495 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 CHMLP26374 656 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 TNNI2P48788 182 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 ANLNQ9NQW6 1124 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 LMBRD1Q9NUN5 540 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 AP2B1P63010 937 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 ADCY2Q08462 1091 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 ATP2B3Q16720 1220 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 KIAA2013Q8IYS2 634 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 TRIM55Q9BYV6 548 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 IPO5O00410 1097 aaKnown RBP12.59□□□□□ -0.39
PTCH1-209ENST00000437951 ADAMTS2O95450 1211 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 KRT81Q14533 505 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 LRRC8BQ6P9F7 803 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 FAM81BQ96LP2 452 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 PRPF6O94906 941 aaKnown RBP12.59□□□□□ -0.39
PTCH1-209ENST00000437951 SH2D4AQ9H788 454 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 H7C1D1 291 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 TADA3O75528 432 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 SRGAP2BP0DMP2 458 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 FLOT2Q14254 428 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 CAPRIN2Q6IMN6 1127 aaKnown RBP12.59□□□□□ -0.39
PTCH1-209ENST00000437951 RETREG2Q8NC44 543 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 PBKQ96KB5 322 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 LRRC2Q9BYS8 371 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 MBIPQ9NS73 344 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 NDE1Q9NXR1 346 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 TRPC6Q9Y210 931 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 KCNJ18B7U540 433 aa12.58□□□□□ -0.39
PTCH1-209ENST00000437951 KCNJ12Q14500 433 aa12.58□□□□□ -0.39
PTCH1-209ENST00000437951 PRPSAP1Q14558 356 aa12.58□□□□□ -0.39
PTCH1-209ENST00000437951 DNMBPQ6XZF7 1577 aa12.58□□□□□ -0.39
PTCH1-209ENST00000437951 CCNT1O60563 726 aaKnown RBP12.58□□□□□ -0.4
PTCH1-209ENST00000437951 CTNND1O60716 968 aaKnown RBP12.58□□□□□ -0.4
PTCH1-209ENST00000437951 PLS1Q14651 629 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 KMT5BQ4FZB7 885 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 RRAGAQ7L523 313 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 LRRC37BQ96QE4 947 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 NR1H3Q13133 447 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 PPP1R13BQ96KQ4 1090 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 GSDMAQ96QA5 445 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 MIS18AQ9NYP9 233 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 ESYT2A0FGR8 921 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 EEF1GP26641 437 aaKnown RBP12.58□□□□□ -0.4
PTCH1-209ENST00000437951 ADALQ6DHV7 355 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 ZNF804AQ7Z570 1209 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 HDAC11Q96DB2 347 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 GRM8O00222 908 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 XRCC5P13010 732 aaKnown RBP12.58□□□□□ -0.4
PTCH1-209ENST00000437951 SKOR1P84550 965 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 UBE3BQ7Z3V4 1068 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 ZNF219Q9P2Y4 722 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-209ENST00000437951 SNX5Q9Y5X3 404 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 STAM2O75886 525 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 SLFNL1Q499Z3 407 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 DEAF1O75398 565 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-209ENST00000437951 RCN2Q14257 317 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 ARHGAP44Q17R89 818 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 MPRIPQ6WCQ1 1025 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 KRT25Q7Z3Z0 450 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-209ENST00000437951 C10orf88Q9H8K7 445 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 KIAA1468Q9P260 1216 aa12.58□□□□□ -0.4
PTCH1-209ENST00000437951 NR1D1P20393 614 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 TEX11Q8IYF3 940 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 SYCE1LA8MT33 242 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 EMBQ6PCB8 327 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 BICC1Q9H694 974 aaKnown RBP12.57□□□□□ -0.4
PTCH1-209ENST00000437951 CAPN11Q9UMQ6 739 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 ESRRAP11474 423 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-209ENST00000437951 GLE1Q53GS7 698 aaKnown RBP12.57□□□□□ -0.4
PTCH1-209ENST00000437951 SLC9C2Q5TAH2 1124 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 RUBCNQ92622 972 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 KRT82Q9NSB4 513 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 ACTN1P12814 892 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 MRPS15P82914 257 aaKnown RBP12.57□□□□□ -0.4
PTCH1-209ENST00000437951 GUCY2DQ02846 1103 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 TTC38Q5R3I4 469 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 OR9Q1Q8NGQ5 310 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 NAIPQ13075 1403 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 MYO1CO00159 1063 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 PTCD1O75127 700 aaKnown RBP12.57□□□□□ -0.4
PTCH1-209ENST00000437951 POLD1P28340 1107 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 NSFP46459 744 aaKnown RBP12.57□□□□□ -0.4
PTCH1-209ENST00000437951 FBXL13Q8NEE6 735 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 TAB2Q9NYJ8 693 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 DNM3Q9UQ16 869 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 SNRPA1P09661 255 aaKnown RBP12.57□□□□□ -0.4
PTCH1-209ENST00000437951 NCAPH2Q6IBW4 605 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 PLEKHM2Q8IWE5 1019 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 RIOK1Q9BRS2 568 aaKnown RBP12.57□□□□□ -0.4
PTCH1-209ENST00000437951 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-209ENST00000437951 SEPT3Q9UH03 358 aa12.57□□□□□ -0.4
PTCH1-209ENST00000437951 ANO5Q75V66 913 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 TRIM50Q86XT4 487 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 NUDT16Q96DE0 195 aaKnown RBP12.56□□□□□ -0.4
PTCH1-209ENST00000437951 IFT140Q96RY7 1462 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 DAB1O75553 588 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 USTQ9Y2C2 406 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 INSRP06213 1382 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms