RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 HOXD10P28358 340 aa13.4□□□□□ -0.26
SNHG3-202ENST00000437681 SYNE3Q6ZMZ3 975 aa13.4□□□□□ -0.26
SNHG3-202ENST00000437681 REPS2Q8NFH8 660 aa13.4□□□□□ -0.26
SNHG3-202ENST00000437681 GPRC5AQ8NFJ5 357 aa13.4□□□□□ -0.26
SNHG3-202ENST00000437681 MTMR8Q96EF0 704 aa13.4□□□□□ -0.26
SNHG3-202ENST00000437681 RANBP17Q9H2T7 1088 aaKnown RBP13.4□□□□□ -0.26
SNHG3-202ENST00000437681 MROH8Q9H579 483 aa13.4□□□□□ -0.26
SNHG3-202ENST00000437681 INCENPQ9NQS7 918 aa13.4□□□□□ -0.26
SNHG3-202ENST00000437681 FBXO40Q9UH90 709 aa13.4□□□□□ -0.26
SNHG3-202ENST00000437681 COL11A1P12107 1806 aaPredicted RBP13.4□□□□□ -0.26
SNHG3-202ENST00000437681 CCDC196A0A1B0GTZ2 297 aa13.4□□□□□ -0.26
SNHG3-202ENST00000437681 CCDC69A6NI79 296 aa13.4□□□□□ -0.26
SNHG3-202ENST00000437681 hCG_1984214I3L0E3 225 aa13.4□□□□□ -0.26
SNHG3-202ENST00000437681 PARP1P09874 1014 aaKnown RBP13.4□□□□□ -0.26
SNHG3-202ENST00000437681 SP3Q02447 781 aa13.4□□□□□ -0.26
SNHG3-202ENST00000437681 RIOX2Q8IUF8 465 aa13.4□□□□□ -0.26
SNHG3-202ENST00000437681 ZNF713Q8N859 430 aaPredicted RBP13.4□□□□□ -0.26
SNHG3-202ENST00000437681 RGS22Q8NE09 1264 aa13.4□□□□□ -0.26
SNHG3-202ENST00000437681 ZNF274Q96GC6 653 aaPredicted RBP13.4□□□□□ -0.26
SNHG3-202ENST00000437681 JAKMIP1Q96N16 626 aaKnown RBP13.4□□□□□ -0.26
SNHG3-202ENST00000437681 SPZ1Q9BXG8 430 aa13.4□□□□□ -0.26
SNHG3-202ENST00000437681 MAP3K20Q9NYL2 800 aaKnown RBP13.4□□□□□ -0.26
SNHG3-202ENST00000437681 TROAPQ12815 778 aa13.39□□□□□ -0.27
SNHG3-202ENST00000437681 IRF5Q13568 498 aa13.39□□□□□ -0.27
SNHG3-202ENST00000437681 SLC38A10Q9HBR0 1119 aa13.39□□□□□ -0.27
SNHG3-202ENST00000437681 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.39□□□□□ -0.27
SNHG3-202ENST00000437681 STRNO43815 780 aa13.39□□□□□ -0.27
SNHG3-202ENST00000437681 KIAA1755Q5JYT7 1200 aa13.39□□□□□ -0.27
SNHG3-202ENST00000437681 CHST13Q8NET6 341 aa13.39□□□□□ -0.27
SNHG3-202ENST00000437681 SMCR8Q8TEV9 937 aaPredicted RBP13.39□□□□□ -0.27
SNHG3-202ENST00000437681 P2RX7Q99572 595 aaKnown RBP13.39□□□□□ -0.27
SNHG3-202ENST00000437681 VWA5AO00534 786 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 CNMDO75829 334 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 GHRHRQ02643 423 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 FAM83BQ5T0W9 1011 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 SYDE2Q5VT97 1194 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 CCDC84Q86UT8 332 aaPredicted RBP13.38□□□□□ -0.27
SNHG3-202ENST00000437681 ZNF654Q8IZM8 581 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 NMT2O60551 498 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 FLOT1O75955 427 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 FCGRTP55899 365 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 ERVK-9P63128 1117 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 ERVK-24P63145 666 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 ATP2B2Q01814 1243 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 MKRN3Q13064 507 aaKnown RBP13.38□□□□□ -0.27
SNHG3-202ENST00000437681 RABEP1Q15276 862 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 LRRC47Q8N1G4 583 aaKnown RBP13.38□□□□□ -0.27
SNHG3-202ENST00000437681 SOCS4Q8WXH5 440 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 C22orf23Q9BZE7 217 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 RIOX1Q9H6W3 641 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 SLC12A7Q9Y666 1083 aa13.38□□□□□ -0.27
SNHG3-202ENST00000437681 TRPA1O75762 1119 aa13.37□□□□□ -0.27
SNHG3-202ENST00000437681 MCM2P49736 904 aa13.37□□□□□ -0.27
SNHG3-202ENST00000437681 ADCK5Q3MIX3 580 aa13.37□□□□□ -0.27
SNHG3-202ENST00000437681 CTCFLQ8NI51 663 aaPredicted RBP13.37□□□□□ -0.27
SNHG3-202ENST00000437681 RBPJLQ9UBG7 517 aa13.37□□□□□ -0.27
SNHG3-202ENST00000437681 TAF6LQ9Y6J9 622 aa13.37□□□□□ -0.27
SNHG3-202ENST00000437681 PLXNB2O15031 1838 aa13.37□□□□□ -0.27
SNHG3-202ENST00000437681 CASTP20810 708 aaKnown RBP13.37□□□□□ -0.27
SNHG3-202ENST00000437681 LACTBP83111 547 aaPredicted RBP13.37□□□□□ -0.27
SNHG3-202ENST00000437681 MSL3Q8N5Y2 521 aaKnown RBP13.37□□□□□ -0.27
SNHG3-202ENST00000437681 TBC1D32Q96NH3 1257 aa13.37□□□□□ -0.27
SNHG3-202ENST00000437681 MAD2L2Q9UI95 211 aa13.37□□□□□ -0.27
SNHG3-202ENST00000437681 DIS3Q9Y2L1 958 aaKnown RBP13.37□□□□□ -0.27
SNHG3-202ENST00000437681 SLC15A5A6NIM6 579 aa13.36□□□□□ -0.27
SNHG3-202ENST00000437681 FOXN1O15353 648 aa13.36□□□□□ -0.27
SNHG3-202ENST00000437681 STK11IPQ8N1F8 1099 aa13.36□□□□□ -0.27
SNHG3-202ENST00000437681 IPO9Q96P70 1041 aaKnown RBP13.36□□□□□ -0.27
SNHG3-202ENST00000437681 TEX13BQ9BXU2 312 aa13.36□□□□□ -0.27
SNHG3-202ENST00000437681 ABCB11O95342 1321 aa13.36□□□□□ -0.27
SNHG3-202ENST00000437681 TMEM232C9JQI7 657 aa13.36□□□□□ -0.27
SNHG3-202ENST00000437681 ICAM1P05362 532 aa13.36□□□□□ -0.27
SNHG3-202ENST00000437681 GRM1Q13255 1194 aa13.36□□□□□ -0.27
SNHG3-202ENST00000437681 APOA5Q6Q788 366 aa13.36□□□□□ -0.27
SNHG3-202ENST00000437681 CLEC10AQ8IUN9 316 aa13.36□□□□□ -0.27
SNHG3-202ENST00000437681 PPP1R18Q6NYC8 613 aa13.35□□□□□ -0.27
SNHG3-202ENST00000437681 ZSCAN31Q96LW9 406 aaPredicted RBP13.35□□□□□ -0.27
SNHG3-202ENST00000437681 SPATC1LQ9H0A9 340 aa13.35□□□□□ -0.27
SNHG3-202ENST00000437681 PDRG1Q9NUG6 133 aa13.35□□□□□ -0.27
SNHG3-202ENST00000437681 SLC5A4Q9NY91 659 aa13.35□□□□□ -0.27
SNHG3-202ENST00000437681 NRBP1Q9UHY1 535 aa13.35□□□□□ -0.27
SNHG3-202ENST00000437681 PRR12Q9ULL5 1215 aa13.35□□□□□ -0.27
SNHG3-202ENST00000437681 ZBTB43O43298 467 aa13.35□□□□□ -0.27
SNHG3-202ENST00000437681 HOXC6P09630 235 aa13.35□□□□□ -0.27
SNHG3-202ENST00000437681 XRCC5P13010 732 aaKnown RBP13.35□□□□□ -0.27
SNHG3-202ENST00000437681 CCDC96Q2M329 555 aa13.35□□□□□ -0.27
SNHG3-202ENST00000437681 NFXL1Q6ZNB6 911 aa13.35□□□□□ -0.27
SNHG3-202ENST00000437681 Q6ZUG5 572 aa13.35□□□□□ -0.27
SNHG3-202ENST00000437681 CTU1Q7Z7A3 348 aaKnown RBP13.35□□□□□ -0.27
SNHG3-202ENST00000437681 NKX2-3Q8TAU0 364 aa13.35□□□□□ -0.27
SNHG3-202ENST00000437681 GLT8D2Q9H1C3 349 aa13.35□□□□□ -0.27
SNHG3-202ENST00000437681 ZNF214Q9UL59 606 aaPredicted RBP13.35□□□□□ -0.27
SNHG3-202ENST00000437681 CTDP1Q9Y5B0 961 aaPredicted RBP13.35□□□□□ -0.27
SNHG3-202ENST00000437681 DHX16O60231 1041 aaKnown RBP13.34□□□□□ -0.27
SNHG3-202ENST00000437681 MCTP2Q6DN12 878 aa13.34□□□□□ -0.27
SNHG3-202ENST00000437681 ZNF467Q7Z7K2 595 aaPredicted RBP13.34□□□□□ -0.27
SNHG3-202ENST00000437681 FANCBQ8NB91 859 aa13.34□□□□□ -0.27
SNHG3-202ENST00000437681 ZKSCAN3Q9BRR0 538 aa13.34□□□□□ -0.27
SNHG3-202ENST00000437681 NAP1L2Q9ULW6 460 aaPredicted RBP13.34□□□□□ -0.27
SNHG3-202ENST00000437681 PFASO15067 1338 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms