RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 BTBD19C9JJ37 291 aa14.31□□□□□ -0.12
LINC00339-204ENST00000434233 CPLX1O14810 134 aa14.31□□□□□ -0.12
LINC00339-204ENST00000434233 FDX1P10109 184 aa14.31□□□□□ -0.12
LINC00339-204ENST00000434233 IFNAR1P17181 557 aa14.31□□□□□ -0.12
LINC00339-204ENST00000434233 OSBPP22059 807 aa14.31□□□□□ -0.12
LINC00339-204ENST00000434233 DSG3P32926 999 aa14.31□□□□□ -0.12
LINC00339-204ENST00000434233 ANP32AP39687 249 aaKnown RBP14.31□□□□□ -0.12
LINC00339-204ENST00000434233 STAT2P52630 851 aa14.31□□□□□ -0.12
LINC00339-204ENST00000434233 KIF23Q02241 960 aaPredicted RBP14.31□□□□□ -0.12
LINC00339-204ENST00000434233 SREBF2Q12772 1141 aa14.31□□□□□ -0.12
LINC00339-204ENST00000434233 RASGRP2Q7LDG7 609 aa14.31□□□□□ -0.12
LINC00339-204ENST00000434233 CCDC83Q8IWF9 413 aa14.31□□□□□ -0.12
LINC00339-204ENST00000434233 PTPN18Q99952 460 aa14.31□□□□□ -0.12
LINC00339-204ENST00000434233 SPZ1Q9BXG8 430 aa14.31□□□□□ -0.12
LINC00339-204ENST00000434233 TANGO6Q9C0B7 1094 aa14.31□□□□□ -0.12
LINC00339-204ENST00000434233 NCOA5Q9HCD5 579 aaKnown RBP14.31□□□□□ -0.12
LINC00339-204ENST00000434233 ZCCHC17Q9NP64 241 aaKnown RBP14.31□□□□□ -0.12
LINC00339-204ENST00000434233 MYPNQ86TC9 1320 aa14.31□□□□□ -0.12
LINC00339-204ENST00000434233 WDR33Q9C0J8 1336 aaKnown RBP14.31□□□□□ -0.12
LINC00339-204ENST00000434233 PRPF3O43395 683 aaKnown RBP14.3□□□□□ -0.12
LINC00339-204ENST00000434233 FLOT1O75955 427 aa14.3□□□□□ -0.12
LINC00339-204ENST00000434233 CDKL5O76039 1030 aa14.3□□□□□ -0.12
LINC00339-204ENST00000434233 PLEKHA8P1O95397 391 aa14.3□□□□□ -0.12
LINC00339-204ENST00000434233 MAP2K2P36507 400 aa14.3□□□□□ -0.12
LINC00339-204ENST00000434233 FUT2Q10981 343 aa14.3□□□□□ -0.12
LINC00339-204ENST00000434233 ST3GAL1Q11201 340 aa14.3□□□□□ -0.12
LINC00339-204ENST00000434233 OTUD7BQ6GQQ9 843 aa14.3□□□□□ -0.12
LINC00339-204ENST00000434233 NBPF11Q86T75 865 aa14.3□□□□□ -0.12
LINC00339-204ENST00000434233 ADGRF4Q8IZF3 695 aa14.3□□□□□ -0.12
LINC00339-204ENST00000434233 INTS4Q96HW7 963 aaKnown RBP14.3□□□□□ -0.12
LINC00339-204ENST00000434233 SLF1Q9BQI6 1058 aa14.3□□□□□ -0.12
LINC00339-204ENST00000434233 PNMA3Q9UL41 463 aa14.3□□□□□ -0.12
LINC00339-204ENST00000434233 PPP1R9AQ9ULJ8 1098 aa14.3□□□□□ -0.12
LINC00339-204ENST00000434233 PRR12Q9ULL5 1215 aa14.3□□□□□ -0.12
LINC00339-204ENST00000434233 ISY1Q9ULR0 285 aaKnown RBP14.3□□□□□ -0.12
LINC00339-204ENST00000434233 ADAMTS5Q9UNA0 930 aa14.3□□□□□ -0.12
LINC00339-204ENST00000434233 PDHXO00330 501 aa14.29□□□□□ -0.12
LINC00339-204ENST00000434233 CYTH3O43739 400 aa14.29□□□□□ -0.12
LINC00339-204ENST00000434233 CTDNEP1O95476 244 aa14.29□□□□□ -0.12
LINC00339-204ENST00000434233 SLC16A2P36021 539 aa14.29□□□□□ -0.12
LINC00339-204ENST00000434233 VEGFBP49765 207 aa14.29□□□□□ -0.12
LINC00339-204ENST00000434233 SSRP1Q08945 709 aaKnown RBP14.29□□□□□ -0.12
LINC00339-204ENST00000434233 IKQ13123 557 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-204ENST00000434233 SYDE2Q5VT97 1194 aa14.29□□□□□ -0.12
LINC00339-204ENST00000434233 LBX2Q6XYB7 198 aa14.29□□□□□ -0.12
LINC00339-204ENST00000434233 IFNL1Q8IU54 200 aa14.29□□□□□ -0.12
LINC00339-204ENST00000434233 CMTR1Q8N1G2 835 aaKnown RBP14.29□□□□□ -0.12
LINC00339-204ENST00000434233 CCDC82Q8N4S0 544 aa14.29□□□□□ -0.12
LINC00339-204ENST00000434233 NSUN7Q8NE18 718 aaKnown RBP14.29□□□□□ -0.12
LINC00339-204ENST00000434233 MTMR8Q96EF0 704 aa14.29□□□□□ -0.12
LINC00339-204ENST00000434233 P2RX7Q99572 595 aaKnown RBP14.29□□□□□ -0.12
LINC00339-204ENST00000434233 RNF26Q9BY78 433 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-204ENST00000434233 ASCC2Q9H1I8 757 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-204ENST00000434233 JMJD4Q9H9V9 463 aa14.29□□□□□ -0.12
LINC00339-204ENST00000434233 VAT1LQ9HCJ6 419 aa14.29□□□□□ -0.12
LINC00339-204ENST00000434233 FBXO28Q9NVF7 368 aa14.29□□□□□ -0.12
LINC00339-204ENST00000434233 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-204ENST00000434233 IRX3P78415 501 aaPredicted RBP14.28□□□□□ -0.12
LINC00339-204ENST00000434233 HTRA3P83110 453 aa14.28□□□□□ -0.12
LINC00339-204ENST00000434233 RLFQ13129 1914 aa14.28□□□□□ -0.12
LINC00339-204ENST00000434233 GRM1Q13255 1194 aa14.28□□□□□ -0.12
LINC00339-204ENST00000434233 SLC35G1Q2M3R5 365 aa14.28□□□□□ -0.12
LINC00339-204ENST00000434233 FAM43AQ8N2R8 423 aa14.28□□□□□ -0.12
LINC00339-204ENST00000434233 SMARCC2Q8TAQ2 1214 aa14.28□□□□□ -0.12
LINC00339-204ENST00000434233 GTF3C2Q8WUA4 911 aaPredicted RBP14.28□□□□□ -0.12
LINC00339-204ENST00000434233 KIFC2Q96AC6 838 aa14.28□□□□□ -0.12
LINC00339-204ENST00000434233 RRP36Q96EU6 259 aaKnown RBP14.28□□□□□ -0.12
LINC00339-204ENST00000434233 ZIC5Q96T25 663 aa14.28□□□□□ -0.12
LINC00339-204ENST00000434233 CPVLQ9H3G5 476 aa14.28□□□□□ -0.12
LINC00339-204ENST00000434233 RBM27Q9P2N5 1060 aaKnown RBP14.28□□□□□ -0.12
LINC00339-204ENST00000434233 V9GY48 417 aaPredicted RBP14.28□□□□□ -0.12
LINC00339-204ENST00000434233 BAZ2BQ9UIF8 2168 aaKnown RBP14.27□□□□□ -0.12
LINC00339-204ENST00000434233 PARP14Q460N5 1801 aa14.27□□□□□ -0.12
LINC00339-204ENST00000434233 CNTNAP5Q8WYK1 1306 aa14.27□□□□□ -0.12
LINC00339-204ENST00000434233 AOC2O75106 756 aa14.27□□□□□ -0.13
LINC00339-204ENST00000434233 ZBED4O75132 1171 aa14.27□□□□□ -0.13
LINC00339-204ENST00000434233 FMNL1O95466 1100 aaPredicted RBP14.27□□□□□ -0.13
LINC00339-204ENST00000434233 HMGN5P82970 282 aaKnown RBP14.27□□□□□ -0.13
LINC00339-204ENST00000434233 AKAP17AQ02040 695 aaKnown RBP14.27□□□□□ -0.13
LINC00339-204ENST00000434233 TRIM22Q8IYM9 498 aa14.27□□□□□ -0.13
LINC00339-204ENST00000434233 RANBP17Q9H2T7 1088 aaKnown RBP14.27□□□□□ -0.13
LINC00339-204ENST00000434233 STK36Q9NRP7 1315 aa14.26□□□□□ -0.13
LINC00339-204ENST00000434233 PNMA6FA0A0J9YX94 578 aa14.26□□□□□ -0.13
LINC00339-204ENST00000434233 SPDYE16A6NNV3 312 aaPredicted RBP14.26□□□□□ -0.13
LINC00339-204ENST00000434233 IGF2BP3O00425 579 aaKnown RBP eCLIP14.26□□□□□ -0.13
LINC00339-204ENST00000434233 VWA5AO00534 786 aa14.26□□□□□ -0.13
LINC00339-204ENST00000434233 ZBTB5O15062 677 aa14.26□□□□□ -0.13
LINC00339-204ENST00000434233 ALDH1A1P00352 501 aa14.26□□□□□ -0.13
LINC00339-204ENST00000434233 HERVK_113P62684 666 aa14.26□□□□□ -0.13
LINC00339-204ENST00000434233 MB21D1Q8N884 522 aa14.26□□□□□ -0.13
LINC00339-204ENST00000434233 PHKBQ93100 1093 aa14.26□□□□□ -0.13
LINC00339-204ENST00000434233 ATG4CQ96DT6 458 aa14.26□□□□□ -0.13
LINC00339-204ENST00000434233 PIGSQ96S52 555 aa14.26□□□□□ -0.13
LINC00339-204ENST00000434233 SLC26A6Q9BXS9 759 aa14.26□□□□□ -0.13
LINC00339-204ENST00000434233 SLC38A10Q9HBR0 1119 aa14.26□□□□□ -0.13
LINC00339-204ENST00000434233 PNMA2Q9UL42 364 aa14.26□□□□□ -0.13
LINC00339-204ENST00000434233 MYH6P13533 1939 aa14.25□□□□□ -0.13
LINC00339-204ENST00000434233 PTPDC1A2A3K4 754 aa14.25□□□□□ -0.13
LINC00339-204ENST00000434233 ATP2A1O14983 1001 aa14.25□□□□□ -0.13
LINC00339-204ENST00000434233 DEXIO95424 95 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms