RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 GRAMD1BQ3KR37 738 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 CIAPIN1Q6FI81 312 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 CCSAPQ6IQ19 270 aaPredicted RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 C16orf86Q6ZW13 317 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 LAPTM4BQ86VI4 370 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 ALDH16A1Q8IZ83 802 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 MYO1HQ8N1T3 1032 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 MPNDQ8N594 471 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 BCO2Q9BYV7 579 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 CCDC8Q9H0W5 538 aaPredicted RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 MAPK8IP1Q9UQF2 711 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 PCDHB3Q9Y5E6 796 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 SOX9P48436 509 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 AMPHP49418 695 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 COPS2P61201 443 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 POU5F1Q01860 360 aaKnown RBP7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 POU5F1BQ06416 359 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 USP50Q70EL3 339 aaPredicted RBP7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 SAPCD2Q86UD0 394 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 TREML1Q86YW5 311 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 ZNF511Q8NB15 262 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 CNKSR1Q969H4 720 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 KIF2CQ99661 725 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 TYW1Q9NV66 732 aaKnown RBP7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 FAM8A1Q9UBU6 413 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 SLC45A1Q9Y2W3 748 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 RGPD2P0DJD1 1756 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 EDC4Q6P2E9 1401 aaKnown RBP7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 B2RBV5 119 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 TNFRSF21O75509 655 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 HOXC9P31274 260 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 ZBED6P86452 979 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 C1orf53Q5VUE5 145 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 PCGF5Q86SE9 256 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 BPHLQ86WA6 291 aaPredicted RBP7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 GPC2Q8N158 579 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 TTC8Q8TAM2 541 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 TRPM4Q8TD43 1214 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 ZDHHC1Q8WTX9 485 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 IFT43Q96FT9 208 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 TMX1Q9H3N1 280 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 PRKAG3Q9UGI9 489 aa7.28□□□□□ -1.24
NIPAL3-205ENST00000432012 AFDNP55196 1824 aaKnown RBP7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 A6NJY4 79 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 TIMM44O43615 452 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 ZPR1O75312 459 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 RAPGEF1Q13905 1077 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 ALDH1L2Q3SY69 923 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 RSPH9Q9H1X1 276 aaPredicted RBP7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 CD2BP2O95400 341 aaKnown RBP7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 MYL1P05976 194 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 TPM2P07951 284 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 TGFB3P10600 412 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 EPB42P16452 691 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 ERVK-9P63128 1117 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 CCDC173Q0VFZ6 552 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 DDR2Q16832 855 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 HDGFL2Q7Z4V5 671 aaPredicted RBP7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 CHPFQ8IZ52 775 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 MYO19Q96H55 970 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 SH3BP1Q9Y3L3 701 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 PTCH2Q9Y6C5 1203 aa7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 RBBP6Q7Z6E9 1792 aaKnown RBP7.27□□□□□ -1.25
NIPAL3-205ENST00000432012 A0A1W2PP64 1363 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 IBTKQ9P2D0 1353 aaPredicted RBP7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 ANKRD26Q9UPS8 1709 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 GOLGA6L22H0YM25 854 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 RIPK4P57078 832 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 ARSHQ5FYA8 562 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 AKAP11Q9UKA4 1901 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 KIF24Q5T7B8 1368 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 EML1O00423 815 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 CYP27B1O15528 508 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 PDPK1O15530 556 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 CAND2O75155 1236 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 SCP2P22307 547 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 ST13P50502 369 aaKnown RBP7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 CCDC85BQ15834 202 aaPredicted RBP7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 CST9Q5W186 159 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 FBXO46Q6PJ61 603 aaPredicted RBP7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 CLEC17AQ6ZS10 378 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 THNSL2Q86YJ6 484 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 SVIPQ8NHG7 77 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 PPP1R9BQ96SB3 815 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 ATG3Q9NT62 314 aa7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 R3HCC1Q9Y3T6 440 aaKnown RBP7.26□□□□□ -1.25
NIPAL3-205ENST00000432012 BACH1O14867 736 aa7.25□□□□□ -1.25
NIPAL3-205ENST00000432012 HIP1RO75146 1068 aa7.25□□□□□ -1.25
NIPAL3-205ENST00000432012 PSMA6P60900 246 aaKnown RBP7.25□□□□□ -1.25
NIPAL3-205ENST00000432012 KLHL40Q2TBA0 621 aa7.25□□□□□ -1.25
NIPAL3-205ENST00000432012 ANKRD45Q5TZF3 282 aa7.25□□□□□ -1.25
NIPAL3-205ENST00000432012 STYK1Q6J9G0 422 aa7.25□□□□□ -1.25
NIPAL3-205ENST00000432012 BICDL1Q6ZP65 573 aa7.25□□□□□ -1.25
NIPAL3-205ENST00000432012 DNAJC25Q9H1X3 360 aa7.25□□□□□ -1.25
NIPAL3-205ENST00000432012 LUZP4Q9P127 313 aa7.25□□□□□ -1.25
NIPAL3-205ENST00000432012 ZNF232Q9UNY5 417 aa7.25□□□□□ -1.25
NIPAL3-205ENST00000432012 AKAP10O43572 662 aa7.25□□□□□ -1.25
NIPAL3-205ENST00000432012 PGRP06401 933 aa7.25□□□□□ -1.25
NIPAL3-205ENST00000432012 MYCLP1P12525 358 aaPredicted RBP7.25□□□□□ -1.25
NIPAL3-205ENST00000432012 FAM83BQ5T0W9 1011 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms