RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 ZNF280CQ8ND82 737 aa11.02□□□□□ -0.65
HMGCLL1-206ENST00000428842 C8orf76Q96K31 380 aa11.02□□□□□ -0.65
HMGCLL1-206ENST00000428842 RPAP3Q9H6T3 665 aaPredicted RBP11.02□□□□□ -0.65
HMGCLL1-206ENST00000428842 VCPKMTQ9H867 229 aa11.02□□□□□ -0.65
HMGCLL1-206ENST00000428842 ARHGEF10LQ9HCE6 1279 aa11.02□□□□□ -0.65
HMGCLL1-206ENST00000428842 AFG3L2Q9Y4W6 797 aa11.02□□□□□ -0.65
HMGCLL1-206ENST00000428842 H3BQV1 296 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 BMP3P12645 472 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 MCM4P33991 863 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 IFFO2Q5TF58 517 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 MKL1Q969V6 931 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 AGBL1Q96MI9 1066 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 TMEM260Q9NX78 707 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 CSADQ9Y600 493 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 PTPRFP10586 1907 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 FLOT1O75955 427 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 BACE1P56817 501 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 HUNKP57058 714 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 NPY5RQ15761 445 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 UBE2SQ16763 222 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 CHADLQ6NUI6 762 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 P2RX7Q99572 595 aaKnown RBP11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 GBA2Q9HCG7 927 aaPredicted RBP11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 PRR12Q9ULL5 1215 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 CNPY2Q9Y2B0 182 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 PAPPA2Q9BXP8 1791 aa11.01□□□□□ -0.65
HMGCLL1-206ENST00000428842 BRD1O95696 1058 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 CYP2C8P10632 490 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 IREB2P48200 963 aaKnown RBP11□□□□□ -0.65
HMGCLL1-206ENST00000428842 QRICH1Q2TAL8 776 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 PAXIP1Q6ZW49 1069 aaPredicted RBP11□□□□□ -0.65
HMGCLL1-206ENST00000428842 ATG4CQ96DT6 458 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11□□□□□ -0.65
HMGCLL1-206ENST00000428842 USP17L15C9J2P7 530 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 USP17L13C9JLJ4 530 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 USP17L11C9JVI0 530 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 USP17L18D6R9N7 530 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 USP17L22D6RA61 530 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 USP17L17D6RBQ6 530 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 USP17L19D6RCP7 530 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 USP17L20D6RJB6 530 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 ZSCAN22P10073 491 aaPredicted RBP11□□□□□ -0.65
HMGCLL1-206ENST00000428842 HOXA13P31271 388 aaPredicted RBP11□□□□□ -0.65
HMGCLL1-206ENST00000428842 NF2P35240 595 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 USP17L24Q0WX57 530 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 CDC37Q16543 378 aaPredicted RBP11□□□□□ -0.65
HMGCLL1-206ENST00000428842 USP17L6PQ6QN14 398 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 GJA10Q969M2 543 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 RIPK3Q9Y572 518 aa11□□□□□ -0.65
HMGCLL1-206ENST00000428842 COL11A1P12107 1806 aaPredicted RBP11□□□□□ -0.65
HMGCLL1-206ENST00000428842 SCG2P13521 617 aa10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 KIF5BP33176 963 aa10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 UBXN2AP68543 259 aa10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 SLC30A10Q6XR72 485 aa10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 ANKRD13AQ8IZ07 590 aa10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 FBXO18Q8NFZ0 1043 aa10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 SLC10A4Q96EP9 437 aa10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 RAVER2Q9HCJ3 691 aaKnown RBP10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 PPP2R3BQ9Y5P8 575 aa10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 FIBPO43427 364 aa10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 F13A1P00488 732 aa10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 MMP14P50281 582 aa10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 STAT2P52630 851 aa10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 AKAP17AQ02040 695 aaKnown RBP10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 TRIM22Q8IYM9 498 aa10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 BIN2Q9UBW5 565 aaPredicted RBP10.99□□□□□ -0.65
HMGCLL1-206ENST00000428842 CALM1P0DP23 149 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 CALM2P0DP24 149 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 CALM3P0DP25 149 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 PLS1Q14651 629 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 DIS3L2Q8IYB7 885 aaKnown RBP10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 GMCL1P1Q8NEA9 526 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 LLPHQ9BRT6 129 aaKnown RBP10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 GOPCQ9HD26 462 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 ABT1Q9ULW3 272 aaKnown RBP10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 CCDC196A0A1B0GTZ2 297 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 STXBP3O00186 592 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 OPLAHO14841 1288 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 PRPF3O43395 683 aaKnown RBP10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 DEXIO95424 95 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 NAPAP54920 295 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 PFKFB3Q16875 520 aaPredicted RBP10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 LDLRAD1Q5T700 205 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 SYDE2Q5VT97 1194 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 JAKMIP3Q5VZ66 844 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 CYP4F22Q6NT55 531 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 PTPN18Q99952 460 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 MTA3Q9BTC8 594 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 KIAA1683Q9H0B3 1180 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 RIOX1Q9H6W3 641 aa10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 RBM28Q9NW13 759 aaKnown RBP10.98□□□□□ -0.65
HMGCLL1-206ENST00000428842 RLFQ13129 1914 aa10.97□□□□□ -0.65
HMGCLL1-206ENST00000428842 GADD45BO75293 160 aaPredicted RBP10.97□□□□□ -0.65
HMGCLL1-206ENST00000428842 RESTQ13127 1097 aa10.97□□□□□ -0.65
HMGCLL1-206ENST00000428842 MOGSQ13724 837 aa10.97□□□□□ -0.65
HMGCLL1-206ENST00000428842 ASPRV1Q53RT3 343 aa10.97□□□□□ -0.65
HMGCLL1-206ENST00000428842 L1TD1Q5T7N2 865 aaKnown RBP10.97□□□□□ -0.65
HMGCLL1-206ENST00000428842 CPLX2Q6PUV4 134 aaKnown RBP10.97□□□□□ -0.65
HMGCLL1-206ENST00000428842 SAPCD2Q86UD0 394 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms