RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 SSBP05455 408 aaKnown RBP eCLIP18.33■□□□□ 0.53
RHBDF1-204ENST00000428730 KRT83P78385 493 aa18.33■□□□□ 0.53
RHBDF1-204ENST00000428730 TCIRG1Q13488 830 aa18.33■□□□□ 0.53
RHBDF1-204ENST00000428730 NEDD9Q14511 834 aa18.33■□□□□ 0.53
RHBDF1-204ENST00000428730 TSR1Q2NL82 804 aaKnown RBP18.33■□□□□ 0.53
RHBDF1-204ENST00000428730 HAUS3Q68CZ6 603 aa18.33■□□□□ 0.53
RHBDF1-204ENST00000428730 KCNH5Q8NCM2 988 aa18.33■□□□□ 0.53
RHBDF1-204ENST00000428730 EPB41L4AQ9HCS5 686 aaPredicted RBP18.33■□□□□ 0.53
RHBDF1-204ENST00000428730 ZNF263O14978 683 aa18.33■□□□□ 0.52
RHBDF1-204ENST00000428730 PLEKP08567 350 aaPredicted RBP18.33■□□□□ 0.52
RHBDF1-204ENST00000428730 FAM153BP0C7A2 387 aa18.33■□□□□ 0.52
RHBDF1-204ENST00000428730 EPB41P11171 864 aaKnown RBP18.33■□□□□ 0.52
RHBDF1-204ENST00000428730 LIFRP42702 1097 aa18.33■□□□□ 0.52
RHBDF1-204ENST00000428730 SF3B2Q13435 895 aaKnown RBP18.33■□□□□ 0.52
RHBDF1-204ENST00000428730 FAM153CQ494X1 144 aa18.33■□□□□ 0.52
RHBDF1-204ENST00000428730 EHBP1Q8NDI1 1231 aa18.33■□□□□ 0.52
RHBDF1-204ENST00000428730 FAM153AQ9UHL3 310 aa18.33■□□□□ 0.52
RHBDF1-204ENST00000428730 CAPN11Q9UMQ6 739 aa18.33■□□□□ 0.52
RHBDF1-204ENST00000428730 TBC1D2BQ9UPU7 963 aa18.33■□□□□ 0.52
RHBDF1-204ENST00000428730 TBX22Q9Y458 520 aa18.33■□□□□ 0.52
RHBDF1-204ENST00000428730 USP54Q70EL1 1684 aa18.33■□□□□ 0.52
RHBDF1-204ENST00000428730 SPEF2Q9C093 1822 aa18.33■□□□□ 0.52
RHBDF1-204ENST00000428730 CCDC189A1A4V9 331 aa18.32■□□□□ 0.52
RHBDF1-204ENST00000428730 ZNF233A6NK53 670 aa18.32■□□□□ 0.52
RHBDF1-204ENST00000428730 B4DLN1 442 aa18.32■□□□□ 0.52
RHBDF1-204ENST00000428730 NCK2O43639 380 aa18.32■□□□□ 0.52
RHBDF1-204ENST00000428730 DEXIO95424 95 aa18.32■□□□□ 0.52
RHBDF1-204ENST00000428730 PDHBP11177 359 aa18.32■□□□□ 0.52
RHBDF1-204ENST00000428730 EPHB4P54760 987 aa18.32■□□□□ 0.52
RHBDF1-204ENST00000428730 SPRED3Q2MJR0 410 aa18.32■□□□□ 0.52
RHBDF1-204ENST00000428730 CCDC40Q4G0X9 1142 aa18.32■□□□□ 0.52
RHBDF1-204ENST00000428730 CCDC43Q96MW1 224 aaKnown RBP18.32■□□□□ 0.52
RHBDF1-204ENST00000428730 LGALS16A8MUM7 142 aa18.32■□□□□ 0.52
RHBDF1-204ENST00000428730 IQCEQ6IPM2 695 aa18.32■□□□□ 0.52
RHBDF1-204ENST00000428730 EPN3Q9H201 632 aa18.32■□□□□ 0.52
RHBDF1-204ENST00000428730 VCPKMTQ9H867 229 aa18.32■□□□□ 0.52
RHBDF1-204ENST00000428730 ATXN2Q99700 1313 aaKnown RBP18.32■□□□□ 0.52
RHBDF1-204ENST00000428730 ANO9A1A5B4 782 aa18.31■□□□□ 0.52
RHBDF1-204ENST00000428730 FRMD3A2A2Y4 597 aa18.31■□□□□ 0.52
RHBDF1-204ENST00000428730 RASSF10A6NK89 507 aa18.31■□□□□ 0.52
RHBDF1-204ENST00000428730 C21orf2O43822 256 aa18.31■□□□□ 0.52
RHBDF1-204ENST00000428730 MOCS3O95396 460 aa18.31■□□□□ 0.52
RHBDF1-204ENST00000428730 CCDC57Q2TAC2 916 aa18.31■□□□□ 0.52
RHBDF1-204ENST00000428730 PREPLQ4J6C6 727 aaPredicted RBP18.31■□□□□ 0.52
RHBDF1-204ENST00000428730 CEP57Q86XR8 500 aa18.31■□□□□ 0.52
RHBDF1-204ENST00000428730 OSCARQ8IYS5 282 aa18.31■□□□□ 0.52
RHBDF1-204ENST00000428730 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.31■□□□□ 0.521e-6■■■■□ 23.6
RHBDF1-204ENST00000428730 SLC40A1Q9NP59 571 aa18.31■□□□□ 0.52
RHBDF1-204ENST00000428730 STIM2Q9P246 746 aa18.31■□□□□ 0.52
RHBDF1-204ENST00000428730 CCDC96Q2M329 555 aa18.31■□□□□ 0.52
RHBDF1-204ENST00000428730 KIRREL3Q8IZU9 778 aa18.31■□□□□ 0.52
RHBDF1-204ENST00000428730 PURBQ96QR8 312 aaKnown RBP18.31■□□□□ 0.52
RHBDF1-204ENST00000428730 CYLC1P35663 651 aaPredicted RBP18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 PTGISQ16647 500 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 ZNF507Q8TCN5 953 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 STAG1Q8WVM7 1258 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 MIEF2Q96C03 454 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 CCT8L2Q96SF2 557 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 ODF2LQ9ULJ1 636 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 RASSF9O75901 435 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 PHKG2P15735 406 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 TRIM21P19474 475 aaKnown RBP18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 NF2P35240 595 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 PPP2R5AQ15172 486 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 MEA1Q16626 185 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 ESCO1Q5FWF5 840 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 ALS2CLQ60I27 953 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 PDXDC2PQ6P474 469 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 RPAINQ86UA6 219 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 MYCBPAPQ8TBZ2 947 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 NKRFO15226 690 aaKnown RBP eCLIP18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 IPO7O95373 1038 aaKnown RBP18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 PAX7P23759 505 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 CARSP49589 748 aaKnown RBP18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 GUCY2FP51841 1108 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 KIF5AQ12840 1032 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 CEP85LQ5SZL2 805 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 NLRP14Q86W24 1093 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 ZNF622Q969S3 477 aaKnown RBP eCLIP18.3■□□□□ 0.524e-8■■■□□ 17.1
RHBDF1-204ENST00000428730 RBM12Q9NTZ6 932 aaKnown RBP18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 NFU1Q9UMS0 254 aa18.3■□□□□ 0.52
RHBDF1-204ENST00000428730 PPP1R37O75864 691 aa18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 PDE6AP16499 860 aa18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 PTGDRQ13258 359 aa18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 WTAPQ15007 396 aa18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 EMBQ6PCB8 327 aa18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 KDM7AQ6ZMT4 941 aa18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 MS4A14Q96JA4 679 aa18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 OSBPL9Q96SU4 736 aa18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 ARHGAP23Q9P227 1491 aa18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 ZPR1O75312 459 aa18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 RPN1P04843 607 aaKnown RBP18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 NR1D1P20393 614 aa18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 SMTNP53814 917 aa18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 KCTD19Q17RG1 926 aaPredicted RBP18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 ZNF658Q5TYW1 1059 aaPredicted RBP18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 IQCA1Q86XH1 822 aa18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 FNBP4Q8N3X1 1017 aaPredicted RBP18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 IFT81Q8WYA0 676 aa18.29■□□□□ 0.52
RHBDF1-204ENST00000428730 STRBPQ96SI9 672 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms