RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 FAM160B2Q86V87 743 aa24.39■■□□□ 1.49
HSPG2-205ENST00000427897 TEX13BQ9BXU2 312 aa24.39■■□□□ 1.49
HSPG2-205ENST00000427897 CRISPLD2Q9H0B8 497 aa24.39■■□□□ 1.49
HSPG2-205ENST00000427897 CCND3P30281 292 aaPredicted RBP24.38■■□□□ 1.49
HSPG2-205ENST00000427897 NECAB2Q7Z6G3 386 aa24.38■■□□□ 1.49
HSPG2-205ENST00000427897 ANKLE1Q8NAG6 615 aa24.38■■□□□ 1.49
HSPG2-205ENST00000427897 DDX11Q96FC9 970 aa24.38■■□□□ 1.49
HSPG2-205ENST00000427897 GMCL1Q96IK5 515 aa24.38■■□□□ 1.49
HSPG2-205ENST00000427897 IL17RBQ9NRM6 502 aa24.38■■□□□ 1.49
HSPG2-205ENST00000427897 FLRT1Q9NZU1 646 aa24.38■■□□□ 1.49
HSPG2-205ENST00000427897 ZNF214Q9UL59 606 aaPredicted RBP24.38■■□□□ 1.49
HSPG2-205ENST00000427897 FGRP09769 529 aa24.37■■□□□ 1.49
HSPG2-205ENST00000427897 FDX1P10109 184 aa24.37■■□□□ 1.49
HSPG2-205ENST00000427897 CYP2C19P33261 490 aa24.37■■□□□ 1.49
HSPG2-205ENST00000427897 IMMTQ16891 758 aaKnown RBP24.37■■□□□ 1.49
HSPG2-205ENST00000427897 STAG1Q8WVM7 1258 aa24.37■■□□□ 1.49
HSPG2-205ENST00000427897 ESR2Q92731 530 aa24.37■■□□□ 1.49
HSPG2-205ENST00000427897 DSCC1Q9BVC3 393 aa24.37■■□□□ 1.49
HSPG2-205ENST00000427897 COBLO75128 1261 aa24.36■■□□□ 1.49
HSPG2-205ENST00000427897 GSPT1P15170 499 aaKnown RBP24.36■■□□□ 1.49
HSPG2-205ENST00000427897 CCDC96Q2M329 555 aa24.36■■□□□ 1.49
HSPG2-205ENST00000427897 OLFML2BQ68BL8 750 aa24.36■■□□□ 1.49
HSPG2-205ENST00000427897 RCSD1Q6JBY9 416 aa24.36■■□□□ 1.49
HSPG2-205ENST00000427897 KCTD1Q719H9 257 aa24.36■■□□□ 1.49
HSPG2-205ENST00000427897 PAWRQ96IZ0 340 aaKnown RBP24.36■■□□□ 1.49
HSPG2-205ENST00000427897 RAVER2Q9HCJ3 691 aaKnown RBP24.36■■□□□ 1.49
HSPG2-205ENST00000427897 TACC3Q9Y6A5 838 aa24.36■■□□□ 1.49
HSPG2-205ENST00000427897 TOP1P11387 765 aaKnown RBP24.35■■□□□ 1.49
HSPG2-205ENST00000427897 TCP11L1Q9NUJ3 509 aa24.35■■□□□ 1.49
HSPG2-205ENST00000427897 MSCO60682 206 aa24.34■■□□□ 1.49
HSPG2-205ENST00000427897 REPS2Q8NFH8 660 aa24.34■■□□□ 1.49
HSPG2-205ENST00000427897 TTC14Q96N46 770 aa24.34■■□□□ 1.49
HSPG2-205ENST00000427897 NBPF3Q9H094 633 aa24.34■■□□□ 1.49
HSPG2-205ENST00000427897 SLC38A10Q9HBR0 1119 aa24.34■■□□□ 1.49
HSPG2-205ENST00000427897 OGDHLQ9ULD0 1010 aa24.34■■□□□ 1.49
HSPG2-205ENST00000427897 NR2E3Q9Y5X4 410 aa24.34■■□□□ 1.49
HSPG2-205ENST00000427897 NEFLP07196 543 aa24.33■■□□□ 1.49
HSPG2-205ENST00000427897 PGK2P07205 417 aa24.33■■□□□ 1.49
HSPG2-205ENST00000427897 IQCA1Q86XH1 822 aa24.33■■□□□ 1.49
HSPG2-205ENST00000427897 TBC1D10CQ8IV04 446 aa24.33■■□□□ 1.49
HSPG2-205ENST00000427897 DCAF4Q8WV16 495 aa24.33■■□□□ 1.49
HSPG2-205ENST00000427897 MAML3Q96JK9 1138 aa24.33■■□□□ 1.49
HSPG2-205ENST00000427897 FBXO40Q9UH90 709 aa24.33■■□□□ 1.49
HSPG2-205ENST00000427897 BRCA2P51587 3418 aa24.33■■□□□ 1.48
HSPG2-205ENST00000427897 ZNF236Q9UL36 1845 aa24.33■■□□□ 1.48
HSPG2-205ENST00000427897 ZNFX1Q9P2E3 1918 aaKnown RBP24.32■■□□□ 1.48
HSPG2-205ENST00000427897 ATP2A1O14983 1001 aa24.32■■□□□ 1.48
HSPG2-205ENST00000427897 EVI5O60447 810 aa24.32■■□□□ 1.48
HSPG2-205ENST00000427897 OAZ1P54368 228 aa24.32■■□□□ 1.48
HSPG2-205ENST00000427897 CCDC178Q5BJE1 867 aa24.32■■□□□ 1.48
HSPG2-205ENST00000427897 UBE2Q1Q7Z7E8 422 aa24.32■■□□□ 1.48
HSPG2-205ENST00000427897 ANKRD35Q8N283 1001 aa24.32■■□□□ 1.48
HSPG2-205ENST00000427897 TMEM47Q9BQJ4 181 aa24.32■■□□□ 1.48
HSPG2-205ENST00000427897 DDX20Q9UHI6 824 aaKnown RBP24.32■■□□□ 1.48
HSPG2-205ENST00000427897 NT5C2P49902 561 aa24.31■■□□□ 1.48
HSPG2-205ENST00000427897 ZKSCAN3Q9BRR0 538 aa24.31■■□□□ 1.48
HSPG2-205ENST00000427897 KRT23Q9C075 422 aa24.31■■□□□ 1.48
HSPG2-205ENST00000427897 C11orf49Q9H6J7 331 aa24.31■■□□□ 1.48
HSPG2-205ENST00000427897 DIS3Q9Y2L1 958 aaKnown RBP24.31■■□□□ 1.48
HSPG2-205ENST00000427897 RIPK3Q9Y572 518 aa24.31■■□□□ 1.48
HSPG2-205ENST00000427897 RAD50Q92878 1312 aa24.31■■□□□ 1.48
HSPG2-205ENST00000427897 PLA2G6O60733 806 aa24.3■■□□□ 1.48
HSPG2-205ENST00000427897 CHMLP26374 656 aa24.3■■□□□ 1.48
HSPG2-205ENST00000427897 CCDC174Q6PII3 467 aa24.3■■□□□ 1.48
HSPG2-205ENST00000427897 CHST13Q8NET6 341 aa24.3■■□□□ 1.48
HSPG2-205ENST00000427897 DIS3LQ8TF46 1054 aaKnown RBP24.3■■□□□ 1.48
HSPG2-205ENST00000427897 CNNM2Q9H8M5 875 aa24.3■■□□□ 1.48
HSPG2-205ENST00000427897 GPCPD1Q9NPB8 672 aa24.3■■□□□ 1.48
HSPG2-205ENST00000427897 HOMER2Q9NSB8 354 aa24.3■■□□□ 1.48
HSPG2-205ENST00000427897 PDE4DIPQ5VU43 2346 aa24.29■■□□□ 1.48
HSPG2-205ENST00000427897 B4E1Z4 1266 aa24.29■■□□□ 1.48
HSPG2-205ENST00000427897 KDM4AO75164 1064 aa24.29■■□□□ 1.48
HSPG2-205ENST00000427897 MYCNP04198 464 aaPredicted RBP24.29■■□□□ 1.48
HSPG2-205ENST00000427897 PRAMEF19Q5SWL8 479 aa24.29■■□□□ 1.48
HSPG2-205ENST00000427897 LHX8Q68G74 356 aa24.29■■□□□ 1.48
HSPG2-205ENST00000427897 CENPQQ7L2Z9 268 aaPredicted RBP24.29■■□□□ 1.48
HSPG2-205ENST00000427897 PRR12Q9ULL5 1215 aa24.29■■□□□ 1.48
HSPG2-205ENST00000427897 NEDD4P46934 1319 aa24.29■■□□□ 1.48
HSPG2-205ENST00000427897 H0YGN5 161 aa24.28■■□□□ 1.48
HSPG2-205ENST00000427897 NOVP48745 357 aa24.28■■□□□ 1.48
HSPG2-205ENST00000427897 TRDNQ13061 729 aa24.28■■□□□ 1.48
HSPG2-205ENST00000427897 ZNF792Q3KQV3 632 aa24.28■■□□□ 1.48
HSPG2-205ENST00000427897 TINF2Q9BSI4 451 aa24.28■■□□□ 1.48
HSPG2-205ENST00000427897 FRMPD2Q68DX3 1309 aaPredicted RBP24.28■■□□□ 1.48
HSPG2-205ENST00000427897 ALAS1P13196 640 aa24.27■■□□□ 1.48
HSPG2-205ENST00000427897 CYBAP13498 195 aa24.27■■□□□ 1.48
HSPG2-205ENST00000427897 SNAP25P60880 206 aa24.27■■□□□ 1.48
HSPG2-205ENST00000427897 UBAC1Q9BSL1 405 aa24.27■■□□□ 1.48
HSPG2-205ENST00000427897 KAT14Q9H8E8 782 aa24.27■■□□□ 1.48
HSPG2-205ENST00000427897 CNPY2Q9Y2B0 182 aa24.27■■□□□ 1.48
HSPG2-205ENST00000427897 SEPT4O43236 478 aa24.26■■□□□ 1.47
HSPG2-205ENST00000427897 SLC16A2P36021 539 aa24.26■■□□□ 1.47
HSPG2-205ENST00000427897 TKFCQ3LXA3 575 aa24.26■■□□□ 1.47
HSPG2-205ENST00000427897 ANO1Q5XXA6 986 aa24.26■■□□□ 1.47
HSPG2-205ENST00000427897 KIAA1211Q6ZU35 1233 aa24.26■■□□□ 1.47
HSPG2-205ENST00000427897 DGKHQ86XP1 1220 aa24.26■■□□□ 1.47
HSPG2-205ENST00000427897 ARRDC4Q8NCT1 418 aa24.26■■□□□ 1.47
HSPG2-205ENST00000427897 TRPV1Q8NER1 839 aa24.26■■□□□ 1.47
HSPG2-205ENST00000427897 AGBL1Q96MI9 1066 aa24.26■■□□□ 1.47
HSPG2-205ENST00000427897 ACAD9Q9H845 621 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms