RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 AS3MTQ9HBK9 375 aa13.93□□□□□ -0.18
RFC4-206ENST00000427785 TRIM75PA6NK02 468 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 STXBP3O00186 592 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 XBP1P17861 261 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 SMARCA1P28370 1054 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 MCM4P33991 863 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 SNAP25P60880 206 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 MAP3K9P80192 1104 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 DNM1Q05193 864 aaKnown RBP13.92□□□□□ -0.18
RFC4-206ENST00000427785 SPP2Q13103 211 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 GNL2Q13823 731 aaKnown RBP13.92□□□□□ -0.18
RFC4-206ENST00000427785 NBR1Q14596 966 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 CDC37Q16543 378 aaPredicted RBP13.92□□□□□ -0.18
RFC4-206ENST00000427785 SYDE2Q5VT97 1194 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 TYW1BQ6NUM6 668 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
RFC4-206ENST00000427785 CLEC17AQ6ZS10 378 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 DIS3L2Q8IYB7 885 aaKnown RBP13.92□□□□□ -0.18
RFC4-206ENST00000427785 OXER1Q8TDS5 423 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 CLMNQ96JQ2 1002 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 PHF20Q9BVI0 1012 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 KIAA1683Q9H0B3 1180 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 ELP3Q9H9T3 547 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 JMJD4Q9H9V9 463 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 CNPY2Q9Y2B0 182 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 ATP6V1DQ9Y5K8 247 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 CSADQ9Y600 493 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 ZHX2Q9Y6X8 837 aa13.92□□□□□ -0.18
RFC4-206ENST00000427785 FIBPO43427 364 aa13.91□□□□□ -0.18
RFC4-206ENST00000427785 PPP1R11O60927 126 aaPredicted RBP13.91□□□□□ -0.18
RFC4-206ENST00000427785 TAL1P17542 331 aaPredicted RBP13.91□□□□□ -0.18
RFC4-206ENST00000427785 NAPAP54920 295 aa13.91□□□□□ -0.18
RFC4-206ENST00000427785 ZNF280CQ8ND82 737 aa13.91□□□□□ -0.18
RFC4-206ENST00000427785 WDR18Q9BV38 432 aa13.91□□□□□ -0.18
RFC4-206ENST00000427785 ZSCAN16Q9H4T2 348 aaPredicted RBP13.91□□□□□ -0.18
RFC4-206ENST00000427785 GDPD2Q9HCC8 539 aa13.91□□□□□ -0.18
RFC4-206ENST00000427785 DDX11L8A8MPP1 907 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 ADAMTS3O15072 1205 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 WDR46O15213 610 aaKnown RBP13.9□□□□□ -0.18
RFC4-206ENST00000427785 VCAM1P19320 739 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 KRT2P35908 639 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 STAT2P52630 851 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 HMGCS2P54868 508 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 NLRP5P59047 1200 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 NR5A1Q13285 461 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 SAFBQ15424 915 aaKnown RBP eCLIP13.9□□□□□ -0.18
RFC4-206ENST00000427785 NPY5RQ15761 445 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 QRICH1Q2TAL8 776 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 ARMC9Q7Z3E5 817 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 RGS22Q8NE09 1264 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 CCDC148Q8NFR7 591 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 MTMR8Q96EF0 704 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 FTOQ9C0B1 505 aaKnown RBP eCLIP13.9□□□□□ -0.18
RFC4-206ENST00000427785 EMILIN3Q9NT22 766 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 FBXO28Q9NVF7 368 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 BARHL2Q9NY43 387 aa13.9□□□□□ -0.18
RFC4-206ENST00000427785 PNMA6FA0A0J9YX94 578 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 FAM205CA6NFA0 338 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 BTBD18B2RXH4 712 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 ZBTB5O15062 677 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 USP14P54578 494 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 BACE1P56817 501 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 BTNL9Q6UXG8 535 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 BRAPQ7Z569 592 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 ANKRD13AQ8IZ07 590 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 LPAR1Q92633 364 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 KIFC2Q96AC6 838 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 COA7Q96BR5 231 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 OTUD5Q96G74 571 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 TANGO6Q9C0B7 1094 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 BRMS1Q9HCU9 246 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 SH3GLB2Q9NR46 395 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 PRR12Q9ULL5 1215 aa13.89□□□□□ -0.19
RFC4-206ENST00000427785 GOLGA6L22H0YM25 854 aa13.88□□□□□ -0.19
RFC4-206ENST00000427785 hCG_1984214I3L0E3 225 aa13.88□□□□□ -0.19
RFC4-206ENST00000427785 KRT85P78386 507 aa13.88□□□□□ -0.19
RFC4-206ENST00000427785 MAP3K11Q16584 847 aa13.88□□□□□ -0.19
RFC4-206ENST00000427785 NOM1Q5C9Z4 860 aaKnown RBP13.88□□□□□ -0.19
RFC4-206ENST00000427785 MYSM1Q5VVJ2 828 aa13.88□□□□□ -0.19
RFC4-206ENST00000427785 ZNF713Q8N859 430 aaPredicted RBP13.88□□□□□ -0.19
RFC4-206ENST00000427785 RASGRP4Q8TDF6 673 aa13.88□□□□□ -0.19
RFC4-206ENST00000427785 RPAP3Q9H6T3 665 aaPredicted RBP13.88□□□□□ -0.19
RFC4-206ENST00000427785 AFG3L2Q9Y4W6 797 aa13.88□□□□□ -0.19
RFC4-206ENST00000427785 SPDYE5A6NIY4 337 aa13.87□□□□□ -0.19
RFC4-206ENST00000427785 CELF2O95319 508 aaKnown RBP13.87□□□□□ -0.19
RFC4-206ENST00000427785 U2AF2P26368 475 aaKnown RBP eCLIP13.87□□□□□ -0.194e-7■■□□□ 12.4
RFC4-206ENST00000427785 CALML3P27482 149 aa13.87□□□□□ -0.19
RFC4-206ENST00000427785 CEBPZQ03701 1054 aaKnown RBP13.87□□□□□ -0.19
RFC4-206ENST00000427785 USH1GQ495M9 461 aa13.87□□□□□ -0.19
RFC4-206ENST00000427785 PPP1R18Q6NYC8 613 aa13.87□□□□□ -0.19
RFC4-206ENST00000427785 CCDC174Q6PII3 467 aa13.87□□□□□ -0.19
RFC4-206ENST00000427785 FAM160B2Q86V87 743 aa13.87□□□□□ -0.19
RFC4-206ENST00000427785 NOSTRINQ8IVI9 506 aa13.87□□□□□ -0.19
RFC4-206ENST00000427785 CCDC12Q8WUD4 166 aaPredicted RBP13.87□□□□□ -0.19
RFC4-206ENST00000427785 TNFRSF25Q93038 417 aa13.87□□□□□ -0.19
RFC4-206ENST00000427785 C12orf42Q96LP6 360 aa13.87□□□□□ -0.19
RFC4-206ENST00000427785 USP28Q96RU2 1077 aa13.87□□□□□ -0.19
RFC4-206ENST00000427785 SLF1Q9BQI6 1058 aa13.87□□□□□ -0.19
RFC4-206ENST00000427785 FOXP1Q9H334 677 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms