RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 PLEKHH3Q7Z736 793 aa29.46■■■□□ 2.31
HERPUD2-205ENST00000427455 KCNB2Q92953 911 aa29.46■■■□□ 2.31
HERPUD2-205ENST00000427455 SLC38A10Q9HBR0 1119 aa29.46■■■□□ 2.31
HERPUD2-205ENST00000427455 GABRQQ9UN88 632 aa29.46■■■□□ 2.31
HERPUD2-205ENST00000427455 CTDP1Q9Y5B0 961 aaPredicted RBP29.46■■■□□ 2.31
HERPUD2-205ENST00000427455 FRMPD2Q68DX3 1309 aaPredicted RBP29.45■■■□□ 2.31
HERPUD2-205ENST00000427455 FLT3LGP49771 235 aa29.45■■■□□ 2.31
HERPUD2-205ENST00000427455 GPATCH4Q5T3I0 446 aaKnown RBP29.45■■■□□ 2.31
HERPUD2-205ENST00000427455 RAET1EQ8TD07 263 aa29.45■■■□□ 2.31
HERPUD2-205ENST00000427455 SOCS4Q8WXH5 440 aa29.45■■■□□ 2.31
HERPUD2-205ENST00000427455 DOCK3Q8IZD9 2030 aa29.45■■■□□ 2.3
HERPUD2-205ENST00000427455 PLXNB2O15031 1838 aa29.44■■■□□ 2.3
HERPUD2-205ENST00000427455 WDR78Q5VTH9 848 aa29.44■■■□□ 2.3
HERPUD2-205ENST00000427455 BTNL9Q6UXG8 535 aa29.44■■■□□ 2.3
HERPUD2-205ENST00000427455 NEK1Q96PY6 1258 aa29.44■■■□□ 2.3
HERPUD2-205ENST00000427455 TEX13BQ9BXU2 312 aa29.44■■■□□ 2.3
HERPUD2-205ENST00000427455 GPCPD1Q9NPB8 672 aa29.44■■■□□ 2.3
HERPUD2-205ENST00000427455 ATP2A1O14983 1001 aa29.43■■■□□ 2.3
HERPUD2-205ENST00000427455 SLC25A27O95847 323 aa29.43■■■□□ 2.3
HERPUD2-205ENST00000427455 ERCC3P19447 782 aa29.43■■■□□ 2.3
HERPUD2-205ENST00000427455 COPB2P35606 906 aa29.43■■■□□ 2.3
HERPUD2-205ENST00000427455 STAT3P40763 770 aa29.43■■■□□ 2.3
HERPUD2-205ENST00000427455 IRF5Q13568 498 aa29.43■■■□□ 2.3
HERPUD2-205ENST00000427455 RIOX2Q8IUF8 465 aa29.43■■■□□ 2.3
HERPUD2-205ENST00000427455 IGDCC4Q8TDY8 1250 aa29.43■■■□□ 2.3
HERPUD2-205ENST00000427455 TMEM87BQ96K49 555 aa29.43■■■□□ 2.3
HERPUD2-205ENST00000427455 MROH8Q9H579 483 aa29.43■■■□□ 2.3
HERPUD2-205ENST00000427455 PRR12Q9ULL5 1215 aa29.43■■■□□ 2.3
HERPUD2-205ENST00000427455 OAZ1P54368 228 aa29.42■■■□□ 2.3
HERPUD2-205ENST00000427455 COL9A3Q14050 684 aaPredicted RBP29.42■■■□□ 2.3
HERPUD2-205ENST00000427455 ASPRV1Q53RT3 343 aa29.42■■■□□ 2.3
HERPUD2-205ENST00000427455 TTBK2Q6IQ55 1244 aa29.42■■■□□ 2.3
HERPUD2-205ENST00000427455 NCAPG2Q86XI2 1143 aa29.42■■■□□ 2.3
HERPUD2-205ENST00000427455 NUDT12Q9BQG2 462 aa29.42■■■□□ 2.3
HERPUD2-205ENST00000427455 GJD2Q9UKL4 321 aa29.42■■■□□ 2.3
HERPUD2-205ENST00000427455 IVNS1ABPQ9Y6Y0 642 aa29.42■■■□□ 2.3
HERPUD2-205ENST00000427455 ZNF236Q9UL36 1845 aa29.42■■■□□ 2.3
HERPUD2-205ENST00000427455 EIF5BO60841 1220 aaKnown RBP29.41■■■□□ 2.3
HERPUD2-205ENST00000427455 ADCK5Q3MIX3 580 aa29.41■■■□□ 2.3
HERPUD2-205ENST00000427455 SLC9C1Q4G0N8 1177 aa29.41■■■□□ 2.3
HERPUD2-205ENST00000427455 SYDE2Q5VT97 1194 aa29.41■■■□□ 2.3
HERPUD2-205ENST00000427455 SNRNP48Q6IEG0 339 aaKnown RBP29.41■■■□□ 2.3
HERPUD2-205ENST00000427455 USP26Q9BXU7 913 aa29.41■■■□□ 2.3
HERPUD2-205ENST00000427455 LY9Q9HBG7 655 aa29.41■■■□□ 2.3
HERPUD2-205ENST00000427455 SNX14Q9Y5W7 946 aa29.41■■■□□ 2.3
HERPUD2-205ENST00000427455 WDR19Q8NEZ3 1342 aa29.41■■■□□ 2.3
HERPUD2-205ENST00000427455 SH2B2O14492 632 aaPredicted RBP29.4■■■□□ 2.3
HERPUD2-205ENST00000427455 PARP1P09874 1014 aaKnown RBP29.4■■■□□ 2.3
HERPUD2-205ENST00000427455 SLC16A2P36021 539 aa29.4■■■□□ 2.3
HERPUD2-205ENST00000427455 MORN1Q5T089 497 aa29.4■■■□□ 2.3
HERPUD2-205ENST00000427455 SENP2Q9HC62 589 aa29.4■■■□□ 2.3
HERPUD2-205ENST00000427455 SLC15A5A6NIM6 579 aa29.39■■■□□ 2.3
HERPUD2-205ENST00000427455 HMGB1P09429 215 aaKnown RBP29.39■■■□□ 2.3
HERPUD2-205ENST00000427455 GOLGA8HP0CJ92 632 aa29.39■■■□□ 2.3
HERPUD2-205ENST00000427455 PTPREP23469 700 aa29.39■■■□□ 2.3
HERPUD2-205ENST00000427455 GRB14Q14449 540 aa29.39■■■□□ 2.3
HERPUD2-205ENST00000427455 CPXCR1Q8N123 301 aa29.39■■■□□ 2.3
HERPUD2-205ENST00000427455 SLAIN1Q8ND83 568 aa29.39■■■□□ 2.3
HERPUD2-205ENST00000427455 RAVER2Q9HCJ3 691 aaKnown RBP29.39■■■□□ 2.3
HERPUD2-205ENST00000427455 STRNO43815 780 aa29.38■■■□□ 2.29
HERPUD2-205ENST00000427455 DHX32Q7L7V1 743 aaKnown RBP29.38■■■□□ 2.29
HERPUD2-205ENST00000427455 CATIPQ7Z7H3 387 aa29.38■■■□□ 2.29
HERPUD2-205ENST00000427455 TMTC2Q8N394 836 aa29.38■■■□□ 2.29
HERPUD2-205ENST00000427455 USP6NLQ92738 828 aa29.38■■■□□ 2.29
HERPUD2-205ENST00000427455 ARMC5Q96C12 935 aa29.38■■■□□ 2.29
HERPUD2-205ENST00000427455 RANBP17Q9H2T7 1088 aaKnown RBP29.38■■■□□ 2.29
HERPUD2-205ENST00000427455 ADCY3O60266 1144 aa29.37■■■□□ 2.29
HERPUD2-205ENST00000427455 GRK4P32298 578 aa29.37■■■□□ 2.29
HERPUD2-205ENST00000427455 RGS2P41220 211 aa29.37■■■□□ 2.29
HERPUD2-205ENST00000427455 LIFRP42702 1097 aa29.37■■■□□ 2.29
HERPUD2-205ENST00000427455 NBPF11Q86T75 865 aa29.37■■■□□ 2.29
HERPUD2-205ENST00000427455 PXYLP1Q8TE99 480 aa29.37■■■□□ 2.29
HERPUD2-205ENST00000427455 JAKMIP1Q96N16 626 aaKnown RBP29.37■■■□□ 2.29
HERPUD2-205ENST00000427455 GPHNQ9NQX3 736 aaPredicted RBP29.37■■■□□ 2.29
HERPUD2-205ENST00000427455 GTF3C3Q9Y5Q9 886 aa29.37■■■□□ 2.29
HERPUD2-205ENST00000427455 CENPFP49454 3210 aa29.36■■■□□ 2.29
HERPUD2-205ENST00000427455 TROAPQ12815 778 aa29.36■■■□□ 2.29
HERPUD2-205ENST00000427455 MAP2K5Q13163 448 aa29.36■■■□□ 2.29
HERPUD2-205ENST00000427455 ABRAQ8N0Z2 381 aa29.36■■■□□ 2.29
HERPUD2-205ENST00000427455 APBA2Q99767 749 aa29.36■■■□□ 2.29
HERPUD2-205ENST00000427455 LRRC2Q9BYS8 371 aa29.36■■■□□ 2.29
HERPUD2-205ENST00000427455 ZNF536O15090 1300 aa29.36■■■□□ 2.29
HERPUD2-205ENST00000427455 DDAH1O94760 285 aa29.35■■■□□ 2.29
HERPUD2-205ENST00000427455 XRCC5P13010 732 aaKnown RBP29.35■■■□□ 2.29
HERPUD2-205ENST00000427455 EXOSC10Q01780 885 aaKnown RBP29.35■■■□□ 2.29
HERPUD2-205ENST00000427455 GRM4Q14833 912 aa29.35■■■□□ 2.29
HERPUD2-205ENST00000427455 CCDC174Q6PII3 467 aa29.35■■■□□ 2.29
HERPUD2-205ENST00000427455 NFXL1Q6ZNB6 911 aa29.35■■■□□ 2.29
HERPUD2-205ENST00000427455 ZNF654Q8IZM8 581 aa29.35■■■□□ 2.29
HERPUD2-205ENST00000427455 SH3TC2Q8TF17 1288 aa29.35■■■□□ 2.29
HERPUD2-205ENST00000427455 CCDC69A6NI79 296 aa29.34■■■□□ 2.29
HERPUD2-205ENST00000427455 FCER1AP12319 257 aa29.34■■■□□ 2.29
HERPUD2-205ENST00000427455 CYP2B6P20813 491 aa29.34■■■□□ 2.29
HERPUD2-205ENST00000427455 PSMA5P28066 241 aa29.34■■■□□ 2.29
HERPUD2-205ENST00000427455 ADORA2AP29274 412 aa29.34■■■□□ 2.29
HERPUD2-205ENST00000427455 SNAP25P60880 206 aa29.34■■■□□ 2.29
HERPUD2-205ENST00000427455 MAD2L2Q9UI95 211 aa29.34■■■□□ 2.29
HERPUD2-205ENST00000427455 RIPK3Q9Y572 518 aa29.34■■■□□ 2.29
HERPUD2-205ENST00000427455 ICAM1P05362 532 aa29.33■■■□□ 2.29
HERPUD2-205ENST00000427455 ELNP15502 786 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms