RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 INHBAP08476 426 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 SLC1A4P43007 532 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 GNPTABQ3T906 1256 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 NUB1Q9Y5A7 615 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 PCP11498 1178 aaKnown RBP15.79■□□□□ 0.12
PTPN13-203ENST00000427191 MROH5Q6ZUA9 1318 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 TNNI1P19237 187 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 CDCA7Q9BWT1 371 aaPredicted RBP15.79■□□□□ 0.12
PTPN13-203ENST00000427191 CHMP2AO43633 222 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 MTX1Q13505 466 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 ADALQ6DHV7 355 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
PTPN13-203ENST00000427191 NCAPH2Q6IBW4 605 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 MRPL46Q9H2W6 279 aaKnown RBP15.78■□□□□ 0.12
PTPN13-203ENST00000427191 LAD1O00515 517 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 RBM6P78332 1123 aaKnown RBP15.78■□□□□ 0.12
PTPN13-203ENST00000427191 ZBTB8OSQ8IWT0 167 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 MIGA1Q8NAN2 632 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 PLIN2Q99541 437 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 TM6SF1Q9BZW5 370 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 RAPGEF6Q8TEU7 1601 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 SBNO2Q9Y2G9 1366 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 SYF2O95926 243 aaKnown RBP15.78■□□□□ 0.12
PTPN13-203ENST00000427191 RETREG2Q8NC44 543 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 BCAS4Q8TDM0 211 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.78■□□□□ 0.12
PTPN13-203ENST00000427191 ZBTB40Q9NUA8 1239 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 KCNK3O14649 394 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 MYOCDQ8IZQ8 938 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 FNBP4Q8N3X1 1017 aaPredicted RBP15.78■□□□□ 0.12
PTPN13-203ENST00000427191 ANKRD42Q8N9B4 389 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 HDAC11Q96DB2 347 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 TTLL3Q9Y4R7 772 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 GPC4O75487 556 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 MRPL40Q9NQ50 206 aaKnown RBP15.78■□□□□ 0.12
PTPN13-203ENST00000427191 SCHIP1Q9P0W5 487 aaPredicted RBP15.78■□□□□ 0.12
PTPN13-203ENST00000427191 FANCAO15360 1455 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 CAPN9O14815 690 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 CLTAP09496 248 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 PPP2R5CQ13362 524 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 DIS3L2Q8IYB7 885 aaKnown RBP15.78■□□□□ 0.12
PTPN13-203ENST00000427191 LSM14BQ9BX40 385 aaKnown RBP15.78■□□□□ 0.12
PTPN13-203ENST00000427191 LCMT1Q9UIC8 334 aa15.78■□□□□ 0.12
PTPN13-203ENST00000427191 IL2RBP14784 551 aa15.77■□□□□ 0.12
PTPN13-203ENST00000427191 ECE1P42892 770 aa15.77■□□□□ 0.12
PTPN13-203ENST00000427191 SUPT20HQ8NEM7 779 aa15.77■□□□□ 0.12
PTPN13-203ENST00000427191 SLF1Q9BQI6 1058 aa15.77■□□□□ 0.12
PTPN13-203ENST00000427191 ANKRD35Q8N283 1001 aa15.77■□□□□ 0.12
PTPN13-203ENST00000427191 TEX12Q9BXU0 123 aa15.77■□□□□ 0.12
PTPN13-203ENST00000427191 MAN1A2O60476 641 aa15.77■□□□□ 0.12
PTPN13-203ENST00000427191 TXKP42681 527 aa15.77■□□□□ 0.12
PTPN13-203ENST00000427191 PPWD1Q96BP3 646 aaKnown RBP15.77■□□□□ 0.12
PTPN13-203ENST00000427191 MRFAP1L1Q96HT8 127 aa15.77■□□□□ 0.12
PTPN13-203ENST00000427191 RFX1P22670 979 aa15.77■□□□□ 0.11
PTPN13-203ENST00000427191 EXOC8Q8IYI6 725 aa15.77■□□□□ 0.11
PTPN13-203ENST00000427191 CCDC138Q96M89 665 aa15.77■□□□□ 0.11
PTPN13-203ENST00000427191 DMP1Q13316 513 aaPredicted RBP15.77■□□□□ 0.11
PTPN13-203ENST00000427191 RPS6KC1Q96S38 1066 aa15.77■□□□□ 0.11
PTPN13-203ENST00000427191 ZNF500O60304 480 aaPredicted RBP15.77■□□□□ 0.11
PTPN13-203ENST00000427191 ARPP21Q9UBL0 812 aaPredicted RBP15.77■□□□□ 0.11
PTPN13-203ENST00000427191 ARMCX3Q9UH62 379 aaPredicted RBP15.77■□□□□ 0.11
PTPN13-203ENST00000427191 ZNF233A6NK53 670 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 YARSP54577 528 aaKnown RBP15.76■□□□□ 0.11
PTPN13-203ENST00000427191 EPHB4P54760 987 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 CABP7Q86V35 215 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 PAWRQ96IZ0 340 aaKnown RBP15.76■□□□□ 0.11
PTPN13-203ENST00000427191 TACO1Q9BSH4 297 aaKnown RBP15.76■□□□□ 0.11
PTPN13-203ENST00000427191 TAB2Q9NYJ8 693 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 FAM83GA6ND36 823 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 E9PMD0 336 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 GNGT2O14610 69 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 MAP3K7O43318 606 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 WDR70Q9NW82 654 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 HESX1Q9UBX0 185 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 MAD1L1Q9Y6D9 718 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 A6NJR5 290 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 EIF3BP55884 814 aaKnown RBP15.76■□□□□ 0.11
PTPN13-203ENST00000427191 BICC1Q9H694 974 aaKnown RBP15.76■□□□□ 0.11
PTPN13-203ENST00000427191 ATP8A2Q9NTI2 1148 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 YTHDC2Q9H6S0 1430 aaKnown RBP15.76■□□□□ 0.11
PTPN13-203ENST00000427191 MORC3Q14149 939 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 DSCC1Q9BVC3 393 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 STK17AQ9UEE5 414 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 TRAPPC8Q9Y2L5 1435 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 KRT19P08727 400 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 PTPREP23469 700 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 CHST3Q7LGC8 479 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 TEX14Q8IWB6 1497 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 GPCPD1Q9NPB8 672 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.76■□□□□ 0.11
PTPN13-203ENST00000427191 IFNB1P01574 187 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 MYL1P05976 194 aa15.76■□□□□ 0.11
PTPN13-203ENST00000427191 GAS7O60861 476 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 NFKBIAP25963 317 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 SESN3P58005 492 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 LRRC23Q53EV4 343 aaPredicted RBP15.75■□□□□ 0.11
PTPN13-203ENST00000427191 DEPTORQ8TB45 409 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 FAM96AQ9H5X1 160 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 SP4Q02446 784 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 BANK1Q8NDB2 785 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms