RNA–Protein interactions for RNA: ENST00000425031.1

LINC00278-201, long intergenic non-protein coding RNA 278, humanhuman

TSL 2 BASIC

Gene LINC00278, Length 528 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00278-201ENST00000425031 USP17L19D6RCP7 530 aa17.04■□□□□ 0.32
LINC00278-201ENST00000425031 USP17L20D6RJB6 530 aa17.04■□□□□ 0.32
LINC00278-201ENST00000425031 JAK2O60674 1132 aa17.04■□□□□ 0.32
LINC00278-201ENST00000425031 CDKL5O76039 1030 aa17.04■□□□□ 0.32
LINC00278-201ENST00000425031 SLC16A2P36021 539 aa17.04■□□□□ 0.32
LINC00278-201ENST00000425031 STAT2P52630 851 aa17.04■□□□□ 0.32
LINC00278-201ENST00000425031 USP17L24Q0WX57 530 aa17.04■□□□□ 0.32
LINC00278-201ENST00000425031 CCL15Q16663 113 aa17.04■□□□□ 0.32
LINC00278-201ENST00000425031 CATSPERGQ6ZRH7 1159 aa17.04■□□□□ 0.32
LINC00278-201ENST00000425031 FAM160B2Q86V87 743 aa17.04■□□□□ 0.32
LINC00278-201ENST00000425031 CHURC1Q8WUH1 139 aa17.04■□□□□ 0.32
LINC00278-201ENST00000425031 MTMR8Q96EF0 704 aa17.04■□□□□ 0.32
LINC00278-201ENST00000425031 FBXO28Q9NVF7 368 aa17.04■□□□□ 0.32
LINC00278-201ENST00000425031 ISY1Q9ULR0 285 aaKnown RBP17.04■□□□□ 0.32
LINC00278-201ENST00000425031 THSD7BQ9C0I4 1608 aa17.03■□□□□ 0.32
LINC00278-201ENST00000425031 PTPDC1A2A3K4 754 aa17.03■□□□□ 0.32
LINC00278-201ENST00000425031 MANSC4A6NHS7 340 aaPredicted RBP17.03■□□□□ 0.32
LINC00278-201ENST00000425031 PRPF3O43395 683 aaKnown RBP17.03■□□□□ 0.32
LINC00278-201ENST00000425031 DTNBO60941 627 aa17.03■□□□□ 0.32
LINC00278-201ENST00000425031 FMNL1O95466 1100 aaPredicted RBP17.03■□□□□ 0.32
LINC00278-201ENST00000425031 DEFB115Q30KQ5 88 aa17.03■□□□□ 0.32
LINC00278-201ENST00000425031 SYDE2Q5VT97 1194 aa17.03■□□□□ 0.32
LINC00278-201ENST00000425031 CYP4F22Q6NT55 531 aa17.03■□□□□ 0.32
LINC00278-201ENST00000425031 ADGRF4Q8IZF3 695 aa17.03■□□□□ 0.32
LINC00278-201ENST00000425031 CCDC82Q8N4S0 544 aa17.03■□□□□ 0.32
LINC00278-201ENST00000425031 PHKBQ93100 1093 aa17.03■□□□□ 0.32
LINC00278-201ENST00000425031 RNF26Q9BY78 433 aaPredicted RBP17.03■□□□□ 0.32
LINC00278-201ENST00000425031 TANGO6Q9C0B7 1094 aa17.03■□□□□ 0.32
LINC00278-201ENST00000425031 JMJD4Q9H9V9 463 aa17.03■□□□□ 0.32
LINC00278-201ENST00000425031 PRR12Q9ULL5 1215 aa17.03■□□□□ 0.32
LINC00278-201ENST00000425031 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.03■□□□□ 0.32
LINC00278-201ENST00000425031 MYPNQ86TC9 1320 aa17.02■□□□□ 0.32
LINC00278-201ENST00000425031 FDPSP14324 419 aaKnown RBP17.02■□□□□ 0.32
LINC00278-201ENST00000425031 SLC4A3P48751 1232 aa17.02■□□□□ 0.32
LINC00278-201ENST00000425031 SSRP1Q08945 709 aaKnown RBP17.02■□□□□ 0.32
LINC00278-201ENST00000425031 ANKRD23Q86SG2 305 aa17.02■□□□□ 0.32
LINC00278-201ENST00000425031 PRPF38AQ8NAV1 312 aaKnown RBP17.02■□□□□ 0.32
LINC00278-201ENST00000425031 SLF1Q9BQI6 1058 aa17.02■□□□□ 0.32
LINC00278-201ENST00000425031 SLC26A6Q9BXS9 759 aa17.02■□□□□ 0.32
LINC00278-201ENST00000425031 PPP1R9AQ9ULJ8 1098 aa17.02■□□□□ 0.32
LINC00278-201ENST00000425031 SLC45A1Q9Y2W3 748 aa17.02■□□□□ 0.32
LINC00278-201ENST00000425031 BTBD19C9JJ37 291 aa17.01■□□□□ 0.31
LINC00278-201ENST00000425031 PPFIA3O75145 1194 aa17.01■□□□□ 0.31
LINC00278-201ENST00000425031 FLOT1O75955 427 aa17.01■□□□□ 0.31
LINC00278-201ENST00000425031 DSG3P32926 999 aa17.01■□□□□ 0.31
LINC00278-201ENST00000425031 HMGN5P82970 282 aaKnown RBP17.01■□□□□ 0.31
LINC00278-201ENST00000425031 IKQ13123 557 aaPredicted RBP17.01■□□□□ 0.31
LINC00278-201ENST00000425031 PABPC4Q13310 644 aaKnown RBP eCLIP17.01■□□□□ 0.31
LINC00278-201ENST00000425031 COG2Q14746 738 aa17.01■□□□□ 0.31
LINC00278-201ENST00000425031 PTPN18Q99952 460 aa17.01■□□□□ 0.31
LINC00278-201ENST00000425031 ADAMTS5Q9UNA0 930 aa17.01■□□□□ 0.31
LINC00278-201ENST00000425031 INHBEP58166 350 aa17■□□□□ 0.31
LINC00278-201ENST00000425031 PKN1Q16512 942 aa17■□□□□ 0.31
LINC00278-201ENST00000425031 PAXIP1Q6ZW49 1069 aaPredicted RBP17■□□□□ 0.31
LINC00278-201ENST00000425031 TRIM22Q8IYM9 498 aa17■□□□□ 0.31
LINC00278-201ENST00000425031 FAM43AQ8N2R8 423 aa17■□□□□ 0.31
LINC00278-201ENST00000425031 KIFC2Q96AC6 838 aa17■□□□□ 0.31
LINC00278-201ENST00000425031 RRP36Q96EU6 259 aaKnown RBP17■□□□□ 0.31
LINC00278-201ENST00000425031 DDX11Q96FC9 970 aa17■□□□□ 0.31
LINC00278-201ENST00000425031 CAPNS2Q96L46 248 aa17■□□□□ 0.31
LINC00278-201ENST00000425031 IPO9Q96P70 1041 aaKnown RBP17■□□□□ 0.31
LINC00278-201ENST00000425031 PIGSQ96S52 555 aa17■□□□□ 0.31
LINC00278-201ENST00000425031 ZIC5Q96T25 663 aa17■□□□□ 0.31
LINC00278-201ENST00000425031 ASCC2Q9H1I8 757 aaPredicted RBP17■□□□□ 0.31
LINC00278-201ENST00000425031 RANBP17Q9H2T7 1088 aaKnown RBP17■□□□□ 0.31
LINC00278-201ENST00000425031 VAT1LQ9HCJ6 419 aa17■□□□□ 0.31
LINC00278-201ENST00000425031 FOXD4L1Q9NU39 408 aa17■□□□□ 0.31
LINC00278-201ENST00000425031 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
LINC00278-201ENST00000425031 ORC3Q9UBD5 711 aaPredicted RBP17■□□□□ 0.31
LINC00278-201ENST00000425031 SMC3Q9UQE7 1217 aa17■□□□□ 0.31
LINC00278-201ENST00000425031 V9GY48 417 aaPredicted RBP17■□□□□ 0.31
LINC00278-201ENST00000425031 RBBP6Q7Z6E9 1792 aaKnown RBP17■□□□□ 0.31
LINC00278-201ENST00000425031 hCG_1642624A0A1W2PR95 340 aa16.99■□□□□ 0.31
LINC00278-201ENST00000425031 SPDYE16A6NNV3 312 aaPredicted RBP16.99■□□□□ 0.31
LINC00278-201ENST00000425031 ZBTB5O15062 677 aa16.99■□□□□ 0.31
LINC00278-201ENST00000425031 DEXIO95424 95 aa16.99■□□□□ 0.31
LINC00278-201ENST00000425031 HSP90AA1P07900 732 aaKnown RBP16.99■□□□□ 0.31
LINC00278-201ENST00000425031 FDX1P10109 184 aa16.99■□□□□ 0.31
LINC00278-201ENST00000425031 GJB2P29033 226 aa16.99■□□□□ 0.31
LINC00278-201ENST00000425031 C1QTNF8P60827 252 aa16.99■□□□□ 0.31
LINC00278-201ENST00000425031 NOGQ13253 232 aa16.99■□□□□ 0.31
LINC00278-201ENST00000425031 CDC37Q16543 378 aaPredicted RBP16.99■□□□□ 0.31
LINC00278-201ENST00000425031 LBX2Q6XYB7 198 aa16.99■□□□□ 0.31
LINC00278-201ENST00000425031 ATG4CQ96DT6 458 aa16.99■□□□□ 0.31
LINC00278-201ENST00000425031 ZCCHC17Q9NP64 241 aaKnown RBP16.99■□□□□ 0.31
LINC00278-201ENST00000425031 HOXC10Q9NYD6 342 aa16.99■□□□□ 0.31
LINC00278-201ENST00000425031 PNMA6FA0A0J9YX94 578 aa16.98■□□□□ 0.31
LINC00278-201ENST00000425031 PDHXO00330 501 aa16.98■□□□□ 0.31
LINC00278-201ENST00000425031 IGF2BP3O00425 579 aaKnown RBP eCLIP16.98■□□□□ 0.31
LINC00278-201ENST00000425031 VWA5AO00534 786 aa16.98■□□□□ 0.31
LINC00278-201ENST00000425031 OSBPP22059 807 aa16.98■□□□□ 0.31
LINC00278-201ENST00000425031 TM4SF4P48230 202 aa16.98■□□□□ 0.31
LINC00278-201ENST00000425031 IRX3P78415 501 aaPredicted RBP16.98■□□□□ 0.31
LINC00278-201ENST00000425031 HTRA3P83110 453 aa16.98■□□□□ 0.31
LINC00278-201ENST00000425031 AKAP17AQ02040 695 aaKnown RBP16.98■□□□□ 0.31
LINC00278-201ENST00000425031 KIF23Q02241 960 aaPredicted RBP16.98■□□□□ 0.31
LINC00278-201ENST00000425031 SREBF2Q12772 1141 aa16.98■□□□□ 0.31
LINC00278-201ENST00000425031 PFKFB3Q16875 520 aaPredicted RBP16.98■□□□□ 0.31
LINC00278-201ENST00000425031 QRICH1Q2TAL8 776 aa16.98■□□□□ 0.31
LINC00278-201ENST00000425031 POTEEQ6S8J3 1075 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms