RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 DHX32Q7L7V1 743 aaKnown RBP21.63■■□□□ 1.05
HDAC6-205ENST00000423941 RIOX2Q8IUF8 465 aa21.63■■□□□ 1.05
HDAC6-205ENST00000423941 TMTC2Q8N394 836 aa21.63■■□□□ 1.05
HDAC6-205ENST00000423941 ERICH2A1L162 156 aa21.62■■□□□ 1.05
HDAC6-205ENST00000423941 SH2B2O14492 632 aaPredicted RBP21.62■■□□□ 1.05
HDAC6-205ENST00000423941 EIF5BO60841 1220 aaKnown RBP21.62■■□□□ 1.05
HDAC6-205ENST00000423941 HMGB1P09429 215 aaKnown RBP21.62■■□□□ 1.05
HDAC6-205ENST00000423941 OAZ1P54368 228 aa21.62■■□□□ 1.05
HDAC6-205ENST00000423941 TROAPQ12815 778 aa21.62■■□□□ 1.05
HDAC6-205ENST00000423941 C8orf34Q49A92 452 aa21.62■■□□□ 1.05
HDAC6-205ENST00000423941 TMEM67Q5HYA8 995 aa21.62■■□□□ 1.05
HDAC6-205ENST00000423941 USP6NLQ92738 828 aa21.62■■□□□ 1.05
HDAC6-205ENST00000423941 KIFC2Q96AC6 838 aa21.62■■□□□ 1.05
HDAC6-205ENST00000423941 IL17RAQ96F46 866 aa21.62■■□□□ 1.05
HDAC6-205ENST00000423941 GPHNQ9NQX3 736 aaPredicted RBP21.62■■□□□ 1.05
HDAC6-205ENST00000423941 PRR12Q9ULL5 1215 aa21.62■■□□□ 1.05
HDAC6-205ENST00000423941 GABRQQ9UN88 632 aa21.62■■□□□ 1.05
HDAC6-205ENST00000423941 ZNFX1Q9P2E3 1918 aaKnown RBP21.61■■□□□ 1.05
HDAC6-205ENST00000423941 TNPO2O14787 897 aaKnown RBP21.61■■□□□ 1.05
HDAC6-205ENST00000423941 SEC24BO95487 1268 aa21.61■■□□□ 1.05
HDAC6-205ENST00000423941 IRF5Q13568 498 aa21.61■■□□□ 1.05
HDAC6-205ENST00000423941 MORN1Q5T089 497 aa21.61■■□□□ 1.05
HDAC6-205ENST00000423941 SGMS1Q86VZ5 419 aa21.61■■□□□ 1.05
HDAC6-205ENST00000423941 FBXL16Q8N461 479 aa21.61■■□□□ 1.05
HDAC6-205ENST00000423941 COA7Q96BR5 231 aa21.61■■□□□ 1.05
HDAC6-205ENST00000423941 MAP3K14Q99558 947 aa21.61■■□□□ 1.05
HDAC6-205ENST00000423941 MTMR7Q9Y216 660 aa21.61■■□□□ 1.05
HDAC6-205ENST00000423941 ZNF536O15090 1300 aa21.6■■□□□ 1.05
HDAC6-205ENST00000423941 ZNF236Q9UL36 1845 aa21.6■■□□□ 1.05
HDAC6-205ENST00000423941 ZBED4O75132 1171 aa21.6■■□□□ 1.05
HDAC6-205ENST00000423941 SLC25A27O95847 323 aa21.6■■□□□ 1.05
HDAC6-205ENST00000423941 STAT3P40763 770 aa21.6■■□□□ 1.05
HDAC6-205ENST00000423941 CCDC96Q2M329 555 aa21.6■■□□□ 1.05
HDAC6-205ENST00000423941 ASPRV1Q53RT3 343 aa21.6■■□□□ 1.05
HDAC6-205ENST00000423941 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.6■■□□□ 1.05
HDAC6-205ENST00000423941 GPR142Q7Z601 462 aa21.6■■□□□ 1.05
HDAC6-205ENST00000423941 PLEKHH3Q7Z736 793 aa21.6■■□□□ 1.05
HDAC6-205ENST00000423941 CHMP4CQ96CF2 233 aa21.6■■□□□ 1.05
HDAC6-205ENST00000423941 MROH8Q9H579 483 aa21.6■■□□□ 1.05
HDAC6-205ENST00000423941 GPCPD1Q9NPB8 672 aa21.6■■□□□ 1.05
HDAC6-205ENST00000423941 SMCHD1A6NHR9 2005 aa21.6■■□□□ 1.05
HDAC6-205ENST00000423941 FRMPD2Q68DX3 1309 aaPredicted RBP21.59■■□□□ 1.05
HDAC6-205ENST00000423941 PALM3A6NDB9 673 aaPredicted RBP21.59■■□□□ 1.05
HDAC6-205ENST00000423941 STRNO43815 780 aa21.59■■□□□ 1.05
HDAC6-205ENST00000423941 ERCC3P19447 782 aa21.59■■□□□ 1.05
HDAC6-205ENST00000423941 PTPREP23469 700 aa21.59■■□□□ 1.05
HDAC6-205ENST00000423941 SLC16A2P36021 539 aa21.59■■□□□ 1.05
HDAC6-205ENST00000423941 FLT3LGP49771 235 aa21.59■■□□□ 1.05
HDAC6-205ENST00000423941 PRKCZQ05513 592 aa21.59■■□□□ 1.05
HDAC6-205ENST00000423941 SYDE2Q5VT97 1194 aa21.59■■□□□ 1.05
HDAC6-205ENST00000423941 TNS4Q8IZW8 715 aa21.59■■□□□ 1.05
HDAC6-205ENST00000423941 TEX13BQ9BXU2 312 aa21.59■■□□□ 1.05
HDAC6-205ENST00000423941 AGXT2Q9BYV1 514 aa21.59■■□□□ 1.05
HDAC6-205ENST00000423941 TM6SF1Q9BZW5 370 aa21.59■■□□□ 1.05
HDAC6-205ENST00000423941 RANBP17Q9H2T7 1088 aaKnown RBP21.59■■□□□ 1.05
HDAC6-205ENST00000423941 MAD2L2Q9UI95 211 aa21.59■■□□□ 1.05
HDAC6-205ENST00000423941 PTCH2Q9Y6C5 1203 aa21.59■■□□□ 1.05
HDAC6-205ENST00000423941 ECM2O94769 699 aaPredicted RBP21.58■■□□□ 1.05
HDAC6-205ENST00000423941 GRM4Q14833 912 aa21.58■■□□□ 1.05
HDAC6-205ENST00000423941 SAMD1Q6SPF0 538 aaPredicted RBP21.58■■□□□ 1.05
HDAC6-205ENST00000423941 ABRAQ8N0Z2 381 aa21.58■■□□□ 1.05
HDAC6-205ENST00000423941 RIPK3Q9Y572 518 aa21.58■■□□□ 1.05
HDAC6-205ENST00000423941 SLC15A5A6NIM6 579 aa21.57■■□□□ 1.04
HDAC6-205ENST00000423941 PARP1P09874 1014 aaKnown RBP21.57■■□□□ 1.04
HDAC6-205ENST00000423941 GOLGA8HP0CJ92 632 aa21.57■■□□□ 1.04
HDAC6-205ENST00000423941 COPB2P35606 906 aa21.57■■□□□ 1.04
HDAC6-205ENST00000423941 GRB14Q14449 540 aa21.57■■□□□ 1.04
HDAC6-205ENST00000423941 STAG2Q8N3U4 1231 aa21.57■■□□□ 1.04
HDAC6-205ENST00000423941 JAKMIP1Q96N16 626 aaKnown RBP21.57■■□□□ 1.04
HDAC6-205ENST00000423941 RAVER2Q9HCJ3 691 aaKnown RBP21.57■■□□□ 1.04
HDAC6-205ENST00000423941 ZSWIM6Q9HCJ5 1215 aa21.57■■□□□ 1.04
HDAC6-205ENST00000423941 HPS5Q9UPZ3 1129 aa21.57■■□□□ 1.04
HDAC6-205ENST00000423941 DDAH1O94760 285 aa21.56■■□□□ 1.04
HDAC6-205ENST00000423941 HOXC6P09630 235 aa21.56■■□□□ 1.04
HDAC6-205ENST00000423941 XRCC5P13010 732 aaKnown RBP21.56■■□□□ 1.04
HDAC6-205ENST00000423941 PSMA5P28066 241 aa21.56■■□□□ 1.04
HDAC6-205ENST00000423941 ANAPC15P60006 121 aa21.56■■□□□ 1.04
HDAC6-205ENST00000423941 IKQ13123 557 aaPredicted RBP21.56■■□□□ 1.04
HDAC6-205ENST00000423941 PLS1Q14651 629 aa21.56■■□□□ 1.04
HDAC6-205ENST00000423941 ZNF654Q8IZM8 581 aa21.56■■□□□ 1.04
HDAC6-205ENST00000423941 PXYLP1Q8TE99 480 aa21.56■■□□□ 1.04
HDAC6-205ENST00000423941 SOCS4Q8WXH5 440 aa21.56■■□□□ 1.04
HDAC6-205ENST00000423941 MTMR8Q96EF0 704 aa21.56■■□□□ 1.04
HDAC6-205ENST00000423941 NUDT12Q9BQG2 462 aa21.56■■□□□ 1.04
HDAC6-205ENST00000423941 LRRC2Q9BYS8 371 aa21.56■■□□□ 1.04
HDAC6-205ENST00000423941 UBA5Q9GZZ9 404 aa21.56■■□□□ 1.04
HDAC6-205ENST00000423941 CENPFP49454 3210 aa21.56■■□□□ 1.04
HDAC6-205ENST00000423941 KLRF2D3W0D1 207 aa21.55■■□□□ 1.04
HDAC6-205ENST00000423941 IGHA2P01877 340 aa21.55■■□□□ 1.04
HDAC6-205ENST00000423941 RPS6KB1P23443 525 aa21.55■■□□□ 1.04
HDAC6-205ENST00000423941 SLC35G1Q2M3R5 365 aa21.55■■□□□ 1.04
HDAC6-205ENST00000423941 SNRNP48Q6IEG0 339 aaKnown RBP21.55■■□□□ 1.04
HDAC6-205ENST00000423941 BLOC1S2Q6QNY1 142 aa21.55■■□□□ 1.04
HDAC6-205ENST00000423941 CATIPQ7Z7H3 387 aa21.55■■□□□ 1.04
HDAC6-205ENST00000423941 CCAR1Q8IX12 1150 aaKnown RBP21.55■■□□□ 1.04
HDAC6-205ENST00000423941 CPXCR1Q8N123 301 aa21.55■■□□□ 1.04
HDAC6-205ENST00000423941 ARMC5Q96C12 935 aa21.55■■□□□ 1.04
HDAC6-205ENST00000423941 ICAM1P05362 532 aa21.54■■□□□ 1.04
HDAC6-205ENST00000423941 CPA1P15085 419 aa21.54■■□□□ 1.04
HDAC6-205ENST00000423941 MAP2K5Q13163 448 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms