RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 PLCG2P16885 1265 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 MDH1P40925 334 aaKnown RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 RAD23BP54727 409 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 RBL2Q08999 1139 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 ZC2HC1CQ53FD0 456 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 LMNTD2Q8IXW0 634 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 CYP4X1Q8N118 509 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 PLEKHF1Q96S99 279 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 SIKE1Q9BRV8 207 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 NCOA5Q9HCD5 579 aaKnown RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 PFDN4Q9NQP4 134 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 METTL5Q9NRN9 209 aaKnown RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 SAMSN1Q9NSI8 373 aaKnown RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 PCDHA7Q9UN72 937 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 ZNF330Q9Y3S2 320 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 HEY1Q9Y5J3 304 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 SPO11Q9Y5K1 396 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 COL17A1Q9UMD9 1497 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 CCDC160A6NGH7 325 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 PDE2AO00408 941 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 IGF2BP3O00425 579 aaKnown RBP eCLIP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 CBFA2T2O43439 604 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 FAM153BP0C7A2 387 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 ZKSCAN1P17029 563 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 CCT6AP40227 531 aaKnown RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 MCL1Q07820 350 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 IFFO1Q0D2I5 559 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 FAM153CQ494X1 144 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 ZNF713Q8N859 430 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 SMCR8Q8TEV9 937 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 ANKRD27Q96NW4 1050 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 SLC7A5P2Q9GIP4 190 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 VIPAS39Q9H9C1 493 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 TUBGCP4Q9UGJ1 667 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 SWAP70Q9UH65 585 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 FAM153AQ9UHL3 310 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 BARX2Q9UMQ3 279 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 NFU1Q9UMS0 254 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 CEP131Q9UPN4 1083 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 MBD5Q9P267 1494 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 RAD54L2Q9Y4B4 1467 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 GMNCA6NCL1 334 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 CASP14P31944 242 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 MYL5Q02045 173 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 PLOD1Q02809 727 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-205ENST00000423368 TRADDQ15628 312 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 ZMYM1Q5SVZ6 1142 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 GKAP1Q5VSY0 366 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-205ENST00000423368 SPECC1LQ69YQ0 1117 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 NCCRP1Q6ZVX7 275 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-205ENST00000423368 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.57□□□□□ -1.2
CNOT4-205ENST00000423368 MRPS27Q92552 414 aaKnown RBP7.57□□□□□ -1.2
CNOT4-205ENST00000423368 EVI5LQ96CN4 794 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 EEF2KMTQ96G04 330 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 GBP5Q96PP8 586 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 CCDC113Q9H0I3 377 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 RASAL2Q9UJF2 1139 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 CADPSQ9ULU8 1353 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 GNA14O95837 355 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 SHBGP04278 402 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 MLH1P40692 756 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 CCR3P51677 355 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 PDE1CQ14123 709 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-205ENST00000423368 HLTFQ14527 1009 aaKnown RBP eCLIP7.57□□□□□ -1.2
CNOT4-205ENST00000423368 PTPROQ16827 1216 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 SLC44A4Q53GD3 710 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 ZNF365Q70YC5 407 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 ARHGAP45Q92619 1136 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 KIFAP3Q92845 792 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 ELAC2Q9BQ52 826 aaKnown RBP7.57□□□□□ -1.2
CNOT4-205ENST00000423368 ZWILCHQ9H900 591 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 AGAP1Q9UPQ3 857 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 DOLKQ9UPQ8 538 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 R3HDM2Q9Y2K5 976 aaKnown RBP7.57□□□□□ -1.2
CNOT4-205ENST00000423368 NFE2L3Q9Y4A8 694 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 PIK3C2GO75747 1445 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 PZPP20742 1482 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 GRIN2AQ12879 1464 aa7.57□□□□□ -1.2
CNOT4-205ENST00000423368 PNMA6EA0A0J9YXQ4 647 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 FOXN1O15353 648 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 VIMP08670 466 aaKnown RBP7.56□□□□□ -1.2
CNOT4-205ENST00000423368 SP100P23497 879 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-205ENST00000423368 SMARCA1P28370 1054 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 GALK1P51570 392 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 ITGA7Q13683 1181 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 CCDC38Q502W7 563 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 PPP4R3AQ6IN85 833 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 OLFM4Q6UX06 510 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 UTS2BQ765I0 119 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 CHST3Q7LGC8 479 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 ZC3H18Q86VM9 953 aaKnown RBP7.56□□□□□ -1.2
CNOT4-205ENST00000423368 SPATS2Q86XZ4 545 aaKnown RBP7.56□□□□□ -1.2
CNOT4-205ENST00000423368 RPAP2Q8IXW5 612 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-205ENST00000423368 AFAP1Q8N556 730 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 JAKMIP2Q96AA8 810 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 KLHL29Q96CT2 875 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 HIC2Q96JB3 615 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 CARD9Q9H257 536 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 NKX1-2Q9UD57 310 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-205ENST00000423368 TSC22D4Q9Y3Q8 395 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms