RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 RPN1P04843 607 aaKnown RBP23.87■■□□□ 1.41
USP48-205ENST00000421625 CCT5P48643 541 aa23.87■■□□□ 1.41
USP48-205ENST00000421625 RCAN1P53805 252 aa23.87■■□□□ 1.41
USP48-205ENST00000421625 PUM3Q15397 648 aaKnown RBP23.87■■□□□ 1.41
USP48-205ENST00000421625 MICALL1Q8N3F8 863 aa23.87■■□□□ 1.41
USP48-205ENST00000421625 FAM76AQ8TAV0 307 aa23.87■■□□□ 1.41
USP48-205ENST00000421625 DUSP10Q9Y6W6 482 aa23.87■■□□□ 1.41
USP48-205ENST00000421625 MINDY4BA8MYZ0 360 aa23.86■■□□□ 1.41
USP48-205ENST00000421625 IRS4O14654 1257 aaPredicted RBP23.86■■□□□ 1.41
USP48-205ENST00000421625 IL2RBP14784 551 aa23.86■■□□□ 1.41
USP48-205ENST00000421625 PMS1P54277 932 aaKnown RBP23.86■■□□□ 1.41
USP48-205ENST00000421625 CKAP4Q07065 602 aaKnown RBP23.86■■□□□ 1.41
USP48-205ENST00000421625 LPIN2Q92539 896 aa23.86■■□□□ 1.41
USP48-205ENST00000421625 BTG4Q9NY30 223 aa23.86■■□□□ 1.41
USP48-205ENST00000421625 CPP00450 1065 aa23.86■■□□□ 1.41
USP48-205ENST00000421625 PPARAQ07869 468 aa23.86■■□□□ 1.41
USP48-205ENST00000421625 MYH2Q9UKX2 1941 aa23.85■■□□□ 1.41
USP48-205ENST00000421625 GOLGA6CA6NDK9 693 aa23.85■■□□□ 1.41
USP48-205ENST00000421625 LGALS16A8MUM7 142 aa23.85■■□□□ 1.41
USP48-205ENST00000421625 EXOC5O00471 708 aa23.85■■□□□ 1.41
USP48-205ENST00000421625 GOLGA6DP0CG33 693 aa23.85■■□□□ 1.41
USP48-205ENST00000421625 FGFR2P21802 821 aa23.85■■□□□ 1.41
USP48-205ENST00000421625 GOLGA6AQ9NYA3 693 aa23.85■■□□□ 1.41
USP48-205ENST00000421625 GUCY2CP25092 1073 aa23.85■■□□□ 1.41
USP48-205ENST00000421625 DNAJC10Q8IXB1 793 aa23.85■■□□□ 1.41
USP48-205ENST00000421625 CAPN11Q9UMQ6 739 aa23.85■■□□□ 1.41
USP48-205ENST00000421625 PAPPAQ13219 1627 aa23.85■■□□□ 1.41
USP48-205ENST00000421625 A0A087WUV0 522 aaPredicted RBP23.84■■□□□ 1.41
USP48-205ENST00000421625 PRPF3O43395 683 aaKnown RBP23.84■■□□□ 1.41
USP48-205ENST00000421625 IRAK1P51617 712 aa23.84■■□□□ 1.41
USP48-205ENST00000421625 AGPAT5Q9NUQ2 364 aa23.84■■□□□ 1.41
USP48-205ENST00000421625 GOLGA6BA6NDN3 693 aa23.84■■□□□ 1.41
USP48-205ENST00000421625 MCM7P33993 719 aa23.84■■□□□ 1.41
USP48-205ENST00000421625 GIGYF2Q6Y7W6 1299 aaKnown RBP23.84■■□□□ 1.41
USP48-205ENST00000421625 ENAHQ8N8S7 591 aaPredicted RBP23.84■■□□□ 1.41
USP48-205ENST00000421625 ZNF507Q8TCN5 953 aa23.84■■□□□ 1.41
USP48-205ENST00000421625 SDR42E1Q8WUS8 393 aa23.84■■□□□ 1.41
USP48-205ENST00000421625 RPGRIP1Q96KN7 1286 aa23.84■■□□□ 1.41
USP48-205ENST00000421625 RTL9Q8NET4 1388 aa23.84■■□□□ 1.41
USP48-205ENST00000421625 ADAMTS3O15072 1205 aa23.83■■□□□ 1.41
USP48-205ENST00000421625 KRT86O43790 486 aa23.83■■□□□ 1.41
USP48-205ENST00000421625 EIF5P55010 431 aaKnown RBP23.83■■□□□ 1.41
USP48-205ENST00000421625 EZH2Q15910 746 aaKnown RBP23.83■■□□□ 1.41
USP48-205ENST00000421625 TSR1Q2NL82 804 aaKnown RBP23.83■■□□□ 1.41
USP48-205ENST00000421625 CARD10Q9BWT7 1032 aa23.83■■□□□ 1.41
USP48-205ENST00000421625 RNF41Q9H4P4 317 aaPredicted RBP23.83■■□□□ 1.41
USP48-205ENST00000421625 TNS2Q63HR2 1409 aa23.83■■□□□ 1.41
USP48-205ENST00000421625 H7C1D1 291 aa23.83■■□□□ 1.41
USP48-205ENST00000421625 PIK3AP1Q6ZUJ8 805 aa23.83■■□□□ 1.41
USP48-205ENST00000421625 RRP36Q96EU6 259 aaKnown RBP23.83■■□□□ 1.41
USP48-205ENST00000421625 MTA3Q9BTC8 594 aa23.83■■□□□ 1.41
USP48-205ENST00000421625 BRMS1Q9HCU9 246 aa23.83■■□□□ 1.41
USP48-205ENST00000421625 JADE2Q9NQC1 790 aa23.83■■□□□ 1.41
USP48-205ENST00000421625 MACROD2A1Z1Q3 448 aa23.83■■□□□ 1.4
USP48-205ENST00000421625 IDEP14735 1019 aa23.83■■□□□ 1.4
USP48-205ENST00000421625 KLK7P49862 253 aa23.83■■□□□ 1.4
USP48-205ENST00000421625 LIG3P49916 1009 aa23.83■■□□□ 1.4
USP48-205ENST00000421625 KRT83P78385 493 aa23.83■■□□□ 1.4
USP48-205ENST00000421625 PNPLA7Q6ZV29 1317 aa23.83■■□□□ 1.4
USP48-205ENST00000421625 DOCK2Q92608 1830 aa23.82■■□□□ 1.4
USP48-205ENST00000421625 GNAT2P19087 354 aa23.82■■□□□ 1.4
USP48-205ENST00000421625 MRPS25P82663 173 aaKnown RBP23.82■■□□□ 1.4
USP48-205ENST00000421625 CYP27A1Q02318 531 aa23.82■■□□□ 1.4
USP48-205ENST00000421625 AENQ8WTP8 325 aaKnown RBP23.82■■□□□ 1.4
USP48-205ENST00000421625 HDAC7Q8WUI4 952 aa23.82■■□□□ 1.4
USP48-205ENST00000421625 YY1AP1Q9H869 796 aa23.82■■□□□ 1.4
USP48-205ENST00000421625 TRMT112Q9UI30 125 aaKnown RBP23.82■■□□□ 1.4
USP48-205ENST00000421625 BAZ2BQ9UIF8 2168 aaKnown RBP23.82■■□□□ 1.4
USP48-205ENST00000421625 ADSSL1Q8N142 457 aa23.82■■□□□ 1.4
USP48-205ENST00000421625 KAT2BQ92831 832 aa23.82■■□□□ 1.4
USP48-205ENST00000421625 EEF2KMTQ96G04 330 aa23.82■■□□□ 1.4
USP48-205ENST00000421625 RMND1Q9NWS8 449 aa23.82■■□□□ 1.4
USP48-205ENST00000421625 DISP2A7MBM2 1401 aa23.81■■□□□ 1.4
USP48-205ENST00000421625 PDS5AQ29RF7 1337 aaKnown RBP23.81■■□□□ 1.4
USP48-205ENST00000421625 A0A1W2PQC6 194 aa23.81■■□□□ 1.4
USP48-205ENST00000421625 B4DLN1 442 aa23.81■■□□□ 1.4
USP48-205ENST00000421625 EHBP1Q8NDI1 1231 aa23.81■■□□□ 1.4
USP48-205ENST00000421625 MEA1Q16626 185 aa23.81■■□□□ 1.4
USP48-205ENST00000421625 TTC19Q6DKK2 380 aaPredicted RBP23.81■■□□□ 1.4
USP48-205ENST00000421625 SND1Q7KZF4 910 aaKnown RBP eCLIP23.81■■□□□ 1.4
USP48-205ENST00000421625 ESR2Q92731 530 aa23.81■■□□□ 1.4
USP48-205ENST00000421625 NHEJ1Q9H9Q4 299 aaPredicted RBP23.81■■□□□ 1.4
USP48-205ENST00000421625 BCORQ6W2J9 1755 aa23.81■■□□□ 1.4
USP48-205ENST00000421625 SLC5A1P13866 664 aa23.8■■□□□ 1.4
USP48-205ENST00000421625 FAM184BQ9ULE4 1060 aa23.8■■□□□ 1.4
USP48-205ENST00000421625 FAM169AQ9Y6X4 670 aa23.8■■□□□ 1.4
USP48-205ENST00000421625 MYH3P11055 1940 aa23.8■■□□□ 1.4
USP48-205ENST00000421625 RASSF10A6NK89 507 aa23.8■■□□□ 1.4
USP48-205ENST00000421625 ADGRA1Q86SQ6 560 aa23.8■■□□□ 1.4
USP48-205ENST00000421625 SMCR8Q8TEV9 937 aaPredicted RBP23.8■■□□□ 1.4
USP48-205ENST00000421625 ZSCAN10Q96SZ4 725 aaPredicted RBP23.8■■□□□ 1.4
USP48-205ENST00000421625 CAPS2Q9BXY5 557 aa23.79■■□□□ 1.4
USP48-205ENST00000421625 GRIN2DO15399 1336 aa23.79■■□□□ 1.4
USP48-205ENST00000421625 CYP2D7A0A087X1C5 515 aa23.79■■□□□ 1.4
USP48-205ENST00000421625 CYLC1P35663 651 aaPredicted RBP23.79■■□□□ 1.4
USP48-205ENST00000421625 BCAMP50895 628 aa23.79■■□□□ 1.4
USP48-205ENST00000421625 PPFIA1Q13136 1202 aa23.79■■□□□ 1.4
USP48-205ENST00000421625 IFIT1BQ5T764 474 aaKnown RBP23.79■■□□□ 1.4
USP48-205ENST00000421625 MMS22LQ6ZRQ5 1243 aa23.79■■□□□ 1.4
USP48-205ENST00000421625 ZNF662Q6ZS27 426 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms