RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 ARVCFO00192 962 aa6.97□□□□□ -1.29
HDAC8-212ENST00000421523 ASNSP08243 561 aa6.97□□□□□ -1.29
HDAC8-212ENST00000421523 AKR1A1P14550 325 aa6.97□□□□□ -1.29
HDAC8-212ENST00000421523 BTDP43251 543 aa6.97□□□□□ -1.29
HDAC8-212ENST00000421523 CLUL1Q15846 466 aa6.97□□□□□ -1.29
HDAC8-212ENST00000421523 BMP8AQ7Z5Y6 402 aa6.97□□□□□ -1.29
HDAC8-212ENST00000421523 FRMD5Q7Z6J6 570 aa6.97□□□□□ -1.29
HDAC8-212ENST00000421523 DEFB128Q7Z7B8 93 aa6.97□□□□□ -1.29
HDAC8-212ENST00000421523 DZIP1Q86YF9 867 aaKnown RBP6.97□□□□□ -1.29
HDAC8-212ENST00000421523 NEK9Q8TD19 979 aa6.97□□□□□ -1.29
HDAC8-212ENST00000421523 MOV10L1Q9BXT6 1211 aaKnown RBP6.97□□□□□ -1.29
HDAC8-212ENST00000421523 SLC5A4Q9NY91 659 aa6.97□□□□□ -1.29
HDAC8-212ENST00000421523 UNC79Q9P2D8 2635 aa6.97□□□□□ -1.29
HDAC8-212ENST00000421523 ELP1O95163 1332 aa6.97□□□□□ -1.29
HDAC8-212ENST00000421523 FLNBO75369 2602 aaKnown RBP6.97□□□□□ -1.29
HDAC8-212ENST00000421523 ROBO3Q96MS0 1386 aa6.96□□□□□ -1.29
HDAC8-212ENST00000421523 ZFYVE26Q68DK2 2539 aa6.96□□□□□ -1.29
HDAC8-212ENST00000421523 MAST4O15021 2626 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 SPDYE16A6NNV3 312 aaPredicted RBP6.96□□□□□ -1.3
HDAC8-212ENST00000421523 KIF28PB7ZC32 967 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 USP17L15C9J2P7 530 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 USP17L13C9JLJ4 530 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 USP17L11C9JVI0 530 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 USP17L18D6R9N7 530 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 USP17L22D6RA61 530 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 USP17L17D6RBQ6 530 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 USP17L19D6RCP7 530 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 USP17L20D6RJB6 530 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 EYA2O00167 538 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 PITPNM1O00562 1244 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 ASGR1P07306 291 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 C6orf222P0C671 652 aaPredicted RBP6.96□□□□□ -1.3
HDAC8-212ENST00000421523 ERCC3P19447 782 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 USP17L24Q0WX57 530 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 PLS1Q14651 629 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 PUM3Q15397 648 aaKnown RBP6.96□□□□□ -1.3
HDAC8-212ENST00000421523 USP17L2Q6R6M4 530 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 TMCO2Q7Z6W1 182 aaPredicted RBP6.96□□□□□ -1.3
HDAC8-212ENST00000421523 HERC6Q8IVU3 1022 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 RPUSD2Q8IZ73 545 aaKnown RBP6.96□□□□□ -1.3
HDAC8-212ENST00000421523 NKD2Q969F2 451 aaPredicted RBP6.96□□□□□ -1.3
HDAC8-212ENST00000421523 VWCEQ96DN2 955 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 SLC9A7Q96T83 725 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 POP1Q99575 1024 aaKnown RBP6.96□□□□□ -1.3
HDAC8-212ENST00000421523 NOC4LQ9BVI4 516 aaKnown RBP6.96□□□□□ -1.3
HDAC8-212ENST00000421523 FOXD4L1Q9NU39 408 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 LMCD1Q9NZU5 365 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 FBXO3Q9UK99 471 aa6.96□□□□□ -1.3
HDAC8-212ENST00000421523 STRNO43815 780 aa6.95□□□□□ -1.3
HDAC8-212ENST00000421523 CIAO1O76071 339 aa6.95□□□□□ -1.3
HDAC8-212ENST00000421523 CD4P01730 458 aa6.95□□□□□ -1.3
HDAC8-212ENST00000421523 PGK2P07205 417 aa6.95□□□□□ -1.3
HDAC8-212ENST00000421523 IFIT1P09914 478 aaKnown RBP6.95□□□□□ -1.3
HDAC8-212ENST00000421523 CT47B1P0C2W7 299 aaPredicted RBP6.95□□□□□ -1.3
HDAC8-212ENST00000421523 ZNF865P0CJ78 1059 aaPredicted RBP6.95□□□□□ -1.3
HDAC8-212ENST00000421523 HOXB3P14651 431 aaPredicted RBP6.95□□□□□ -1.3
HDAC8-212ENST00000421523 VCAM1P19320 739 aa6.95□□□□□ -1.3
HDAC8-212ENST00000421523 AVPR2P30518 371 aa6.95□□□□□ -1.3
HDAC8-212ENST00000421523 NBL1P41271 181 aa6.95□□□□□ -1.3
HDAC8-212ENST00000421523 CCSAPQ6IQ19 270 aaPredicted RBP6.95□□□□□ -1.3
HDAC8-212ENST00000421523 NCAPG2Q86XI2 1143 aa6.95□□□□□ -1.3
HDAC8-212ENST00000421523 KLHDC9Q8NEP7 349 aa6.95□□□□□ -1.3
HDAC8-212ENST00000421523 LPIN2Q92539 896 aa6.95□□□□□ -1.3
HDAC8-212ENST00000421523 TINF2Q9BSI4 451 aa6.95□□□□□ -1.3
HDAC8-212ENST00000421523 TRPV6Q9H1D0 765 aa6.95□□□□□ -1.3
HDAC8-212ENST00000421523 SUGCTQ9HAC7 445 aa6.95□□□□□ -1.3
HDAC8-212ENST00000421523 ZBTB21Q9ULJ3 1066 aa6.95□□□□□ -1.3
HDAC8-212ENST00000421523 SCN5AQ14524 2016 aa6.94□□□□□ -1.3
HDAC8-212ENST00000421523 CATSPERGQ6ZRH7 1159 aa6.94□□□□□ -1.3
HDAC8-212ENST00000421523 KIAA2013Q8IYS2 634 aa6.94□□□□□ -1.3
HDAC8-212ENST00000421523 TRIM34Q9BYJ4 488 aa6.94□□□□□ -1.3
HDAC8-212ENST00000421523 SPATC1LQ9H0A9 340 aa6.94□□□□□ -1.3
HDAC8-212ENST00000421523 RPAP3Q9H6T3 665 aaPredicted RBP6.94□□□□□ -1.3
HDAC8-212ENST00000421523 COPRSQ9NQ92 184 aa6.94□□□□□ -1.3
HDAC8-212ENST00000421523 CLDND1Q9NY35 253 aa6.94□□□□□ -1.3
HDAC8-212ENST00000421523 NRBP1Q9UHY1 535 aa6.94□□□□□ -1.3
HDAC8-212ENST00000421523 HERC5Q9UII4 1024 aaKnown RBP6.94□□□□□ -1.3
HDAC8-212ENST00000421523 ZHX1Q9UKY1 873 aaPredicted RBP6.94□□□□□ -1.3
HDAC8-212ENST00000421523 NOB1Q9ULX3 412 aaKnown RBP6.94□□□□□ -1.3
HDAC8-212ENST00000421523 CNPY2Q9Y2B0 182 aa6.94□□□□□ -1.3
HDAC8-212ENST00000421523 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.94□□□□□ -1.3
HDAC8-212ENST00000421523 ASH1LQ9NR48 2969 aaKnown RBP6.94□□□□□ -1.3
HDAC8-212ENST00000421523 MROH7-TTC4A0A0A0MT08 1334 aa6.94□□□□□ -1.3
HDAC8-212ENST00000421523 SALL1Q9NSC2 1324 aa6.94□□□□□ -1.3
HDAC8-212ENST00000421523 SIPA1L1O43166 1804 aa6.94□□□□□ -1.3
HDAC8-212ENST00000421523 GALR2O43603 387 aaPredicted RBP6.93□□□□□ -1.3
HDAC8-212ENST00000421523 B4GALT4O60513 344 aa6.93□□□□□ -1.3
HDAC8-212ENST00000421523 PDGFBP01127 241 aaPredicted RBP6.93□□□□□ -1.3
HDAC8-212ENST00000421523 FCER1AP12319 257 aa6.93□□□□□ -1.3
HDAC8-212ENST00000421523 ACTN1P12814 892 aa6.93□□□□□ -1.3
HDAC8-212ENST00000421523 RARSP54136 660 aaKnown RBP6.93□□□□□ -1.3
HDAC8-212ENST00000421523 RHBDL3P58872 404 aa6.93□□□□□ -1.3
HDAC8-212ENST00000421523 ZXDAP98168 799 aa6.93□□□□□ -1.3
HDAC8-212ENST00000421523 MKRN4PQ13434 485 aaPredicted RBP6.93□□□□□ -1.3
HDAC8-212ENST00000421523 MTX1Q13505 466 aa6.93□□□□□ -1.3
HDAC8-212ENST00000421523 GNASQ5JWF2 1037 aa6.93□□□□□ -1.3
HDAC8-212ENST00000421523 LBX2Q6XYB7 198 aa6.93□□□□□ -1.3
HDAC8-212ENST00000421523 CRACR2BQ8N4Y2 399 aaPredicted RBP6.93□□□□□ -1.3
HDAC8-212ENST00000421523 PCSK9Q8NBP7 692 aaKnown RBP6.93□□□□□ -1.3
HDAC8-212ENST00000421523 ARHGAP45Q92619 1136 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms