RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 MAP3K14Q99558 947 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 GPR108Q9NPR9 543 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 DDX21Q9NR30 783 aaKnown RBP eCLIP6.86□□□□□ -1.31
CHD2-202ENST00000420239 ODF2LQ9ULJ1 636 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 HPS5Q9UPZ3 1129 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 MEFVO15553 781 aaPredicted RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 DDX58O95786 925 aaKnown RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 IBSPP21815 317 aaPredicted RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 NF2P35240 595 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 SKOR1P84550 965 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 MAP2K1Q02750 393 aaPredicted RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 PTPN12Q05209 780 aaKnown RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 TBC1D8BQ0IIM8 1120 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 PROSER3Q2NL68 480 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 Q3C1V9 767 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 TTMPQ5BVD1 217 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 VARS2Q5ST30 1063 aaKnown RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 CCDC102BQ68D86 513 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 TLDC1Q6P9B6 456 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 TMED8Q6PL24 325 aaPredicted RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 FAM228AQ86W67 206 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 CPLX3Q8WVH0 158 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 RRP36Q96EU6 259 aaKnown RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 CRACR2AQ9BSW2 395 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 PAGR1Q9BTK6 254 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 VCPKMTQ9H867 229 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 HDAC6Q9UBN7 1215 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 TRIM10Q9UDY6 481 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 DACH1Q9UI36 760 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 TTF2Q9UNY4 1162 aaKnown RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 SLIT3O75094 1523 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 CAMTA1Q9Y6Y1 1673 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 TARSL2A2RTX5 802 aaKnown RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 GOLGA6BA6NDN3 693 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 BTBD11A6QL63 1104 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 H0YHG0 523 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 HSPD1P10809 573 aaKnown RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 PDHBP11177 359 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 MCM3P25205 808 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 ERCC5P28715 1186 aaPredicted RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 RDXP35241 583 aaKnown RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 FXR1P51114 621 aaKnown RBP eCLIP6.85□□□□□ -1.31
CHD2-202ENST00000420239 CCNHP51946 323 aaPredicted RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 MORC3Q14149 939 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 SLC9C2Q5TAH2 1124 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 POTEGQ6S5H5 508 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 LAPTM4BQ86VI4 370 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 OTUD6BQ8N6M0 293 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 AENQ8WTP8 325 aaKnown RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.85□□□□□ -1.31
CHD2-202ENST00000420239 ARL8AQ96BM9 186 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 SLC40A1Q9NP59 571 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 SEC31BQ9NQW1 1179 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 KLC4Q9NSK0 619 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 DDX20Q9UHI6 824 aaKnown RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 REXO2Q9Y3B8 237 aaKnown RBP6.85□□□□□ -1.31
CHD2-202ENST00000420239 RGPD2P0DJD1 1756 aa6.85□□□□□ -1.31
CHD2-202ENST00000420239 ITIH6Q6UXX5 1313 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 FRMD3A2A2Y4 597 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 NEURL1BA8MQ27 555 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 USP17L15C9J2P7 530 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 USP17L10C9JJH3 530 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 USP17L13C9JLJ4 530 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 USP17L12C9JPN9 530 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 USP17L11C9JVI0 530 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 USP17L21D6R901 530 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 USP17L18D6R9N7 530 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 USP17L22D6RA61 530 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 USP17L17D6RBQ6 530 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 USP17L19D6RCP7 530 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 GOLGA8KD6RF30 607 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 USP17L20D6RJB6 530 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 NDUFAB1O14561 156 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 RNMTO43148 476 aaKnown RBP6.84□□□□□ -1.31
CHD2-202ENST00000420239 SRGAP2O75044 1071 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 KIAA0754O94854 1291 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 GYPCP04921 128 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 ATP1A1P05023 1023 aaKnown RBP6.84□□□□□ -1.31
CHD2-202ENST00000420239 CASP14P31944 242 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 SMTNP53814 917 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 IRX1P78414 480 aaPredicted RBP6.84□□□□□ -1.31
CHD2-202ENST00000420239 USP17L24Q0WX57 530 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 GRIK3Q13003 919 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 CRYMQ14894 314 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 EPHA10Q5JZY3 1008 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 CCNI2Q6ZMN8 369 aaPredicted RBP6.84□□□□□ -1.31
CHD2-202ENST00000420239 B4GALNT4Q76KP1 1039 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 RAB11FIP4Q86YS3 637 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 MB21D2Q8IYB1 491 aaPredicted RBP6.84□□□□□ -1.31
CHD2-202ENST00000420239 CCDC13Q8IYE1 715 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 SPATA20Q8TB22 786 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 KLHDC4Q8TBB5 520 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 IP6K1Q92551 441 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 USB1Q9BQ65 265 aaKnown RBP6.84□□□□□ -1.31
CHD2-202ENST00000420239 HOOK1Q9UJC3 728 aaKnown RBP6.84□□□□□ -1.31
CHD2-202ENST00000420239 AFDNP55196 1824 aaKnown RBP6.84□□□□□ -1.31
CHD2-202ENST00000420239 NFAT5O94916 1531 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 CPDO75976 1380 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 ZMYM6O95789 1325 aa6.84□□□□□ -1.31
CHD2-202ENST00000420239 EME2A4GXA9 379 aaPredicted RBP6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms