RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 RBM43Q6ZSC3 357 aaKnown RBP24.05■■□□□ 1.44
GPC1-202ENST00000420138 FMR1NBQ8N0W7 255 aaPredicted RBP24.05■■□□□ 1.44
GPC1-202ENST00000420138 JMJD4Q9H9V9 463 aa24.05■■□□□ 1.44
GPC1-202ENST00000420138 FAM160A1Q05DH4 1040 aa24.05■■□□□ 1.44
GPC1-202ENST00000420138 CAMK4Q16566 473 aa24.05■■□□□ 1.44
GPC1-202ENST00000420138 KCTD1Q719H9 257 aa24.05■■□□□ 1.44
GPC1-202ENST00000420138 MIGA2Q7L4E1 593 aa24.05■■□□□ 1.44
GPC1-202ENST00000420138 GMCL1P1Q8NEA9 526 aa24.05■■□□□ 1.44
GPC1-202ENST00000420138 ZMYND12Q9H0C1 365 aa24.05■■□□□ 1.44
GPC1-202ENST00000420138 DDNO94850 711 aaPredicted RBP24.04■■□□□ 1.44
GPC1-202ENST00000420138 CMA1P23946 247 aa24.04■■□□□ 1.44
GPC1-202ENST00000420138 SLFN13Q68D06 897 aa24.04■■□□□ 1.44
GPC1-202ENST00000420138 ADGRF4Q8IZF3 695 aa24.04■■□□□ 1.44
GPC1-202ENST00000420138 CCDC148Q8NFR7 591 aa24.04■■□□□ 1.44
GPC1-202ENST00000420138 DCAF4Q8WV16 495 aa24.04■■□□□ 1.44
GPC1-202ENST00000420138 MTMR8Q96EF0 704 aa24.04■■□□□ 1.44
GPC1-202ENST00000420138 MORC2Q9Y6X9 1032 aaPredicted RBP24.04■■□□□ 1.44
GPC1-202ENST00000420138 A0A1B0GVL5 298 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 F5H6K3 240 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 NDUFA8P51970 172 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 KLRC3Q07444 240 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 GALNT17Q6IS24 598 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 SHC4Q6S5L8 630 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 CCDC73Q6ZRK6 1079 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 JMYQ8N9B5 988 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 SEC63Q9UGP8 760 aaKnown RBP24.03■■□□□ 1.44
GPC1-202ENST00000420138 ZBTB21Q9ULJ3 1066 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 SLC16A2P36021 539 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 TNNI2P48788 182 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 CCDC96Q2M329 555 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 PIK3AP1Q6ZUJ8 805 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 CLIC6Q96NY7 704 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 FBXO2Q9UK22 296 aaPredicted RBP24.03■■□□□ 1.44
GPC1-202ENST00000420138 PCDHA6Q9UN73 950 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 PCDHA8Q9Y5H6 950 aa24.03■■□□□ 1.44
GPC1-202ENST00000420138 MYH4Q9Y623 1939 aa24.02■■□□□ 1.44
GPC1-202ENST00000420138 ATP2B1P20020 1258 aa24.02■■□□□ 1.44
GPC1-202ENST00000420138 RASGRP4Q8TDF6 673 aa24.02■■□□□ 1.44
GPC1-202ENST00000420138 ANP32BQ92688 251 aaKnown RBP24.02■■□□□ 1.44
GPC1-202ENST00000420138 GMCL1Q96IK5 515 aa24.02■■□□□ 1.44
GPC1-202ENST00000420138 TNMDQ9H2S6 317 aa24.02■■□□□ 1.44
GPC1-202ENST00000420138 TSPY26PQ9H489 355 aa24.02■■□□□ 1.44
GPC1-202ENST00000420138 HACL1Q9UJ83 578 aa24.02■■□□□ 1.44
GPC1-202ENST00000420138 SYNPO2Q9UMS6 1093 aa24.02■■□□□ 1.44
GPC1-202ENST00000420138 FAM237AA0A1B0GTK4 181 aa24.01■■□□□ 1.43
GPC1-202ENST00000420138 TRIM75PA6NK02 468 aa24.01■■□□□ 1.43
GPC1-202ENST00000420138 CUTAO60888 179 aa24.01■■□□□ 1.43
GPC1-202ENST00000420138 PPP1R11O60927 126 aaPredicted RBP24.01■■□□□ 1.43
GPC1-202ENST00000420138 NDUFB10O96000 172 aa24.01■■□□□ 1.43
GPC1-202ENST00000420138 PTPREP23469 700 aa24.01■■□□□ 1.43
GPC1-202ENST00000420138 SLC1A4P43007 532 aa24.01■■□□□ 1.43
GPC1-202ENST00000420138 NAPAP54920 295 aa24.01■■□□□ 1.43
GPC1-202ENST00000420138 TNFAIP1Q13829 316 aa24.01■■□□□ 1.43
GPC1-202ENST00000420138 HPSEQ9Y251 543 aa24.01■■□□□ 1.43
GPC1-202ENST00000420138 MRVI1Q9Y6F6 885 aa24.01■■□□□ 1.43
GPC1-202ENST00000420138 PHF20L1A8MW92 1017 aa24■■□□□ 1.43
GPC1-202ENST00000420138 hCG_1984214I3L0E3 225 aa24■■□□□ 1.43
GPC1-202ENST00000420138 CAP2P40123 477 aa24■■□□□ 1.43
GPC1-202ENST00000420138 ECE1P42892 770 aa24■■□□□ 1.43
GPC1-202ENST00000420138 GRIN1Q05586 938 aa24■■□□□ 1.43
GPC1-202ENST00000420138 MAP3K11Q16584 847 aa24■■□□□ 1.43
GPC1-202ENST00000420138 ZNF713Q8N859 430 aaPredicted RBP24■■□□□ 1.43
GPC1-202ENST00000420138 NOL7Q9UMY1 257 aaKnown RBP24■■□□□ 1.43
GPC1-202ENST00000420138 PNMA6FA0A0J9YX94 578 aa24■■□□□ 1.43
GPC1-202ENST00000420138 ESYT2A0FGR8 921 aa24■■□□□ 1.43
GPC1-202ENST00000420138 USP17L10C9JJH3 530 aa24■■□□□ 1.43
GPC1-202ENST00000420138 LMOD1P29536 600 aaPredicted RBP24■■□□□ 1.43
GPC1-202ENST00000420138 EPS15P42566 896 aa24■■□□□ 1.43
GPC1-202ENST00000420138 TRAPPC10P48553 1259 aa24■■□□□ 1.43
GPC1-202ENST00000420138 RESP18Q5W5W9 173 aa24■■□□□ 1.43
GPC1-202ENST00000420138 DPY19L2Q6NUT2 758 aa24■■□□□ 1.43
GPC1-202ENST00000420138 KRI1Q8N9T8 703 aaKnown RBP24■■□□□ 1.43
GPC1-202ENST00000420138 ACER1Q8TDN7 264 aa24■■□□□ 1.43
GPC1-202ENST00000420138 FRMD4AQ9P2Q2 1039 aaPredicted RBP24■■□□□ 1.43
GPC1-202ENST00000420138 SMCO2A6NFE2 343 aa23.99■■□□□ 1.43
GPC1-202ENST00000420138 PFKFB1P16118 471 aa23.99■■□□□ 1.43
GPC1-202ENST00000420138 CCDC173Q0VFZ6 552 aa23.99■■□□□ 1.43
GPC1-202ENST00000420138 TTC38Q5R3I4 469 aa23.99■■□□□ 1.43
GPC1-202ENST00000420138 FAM43AQ8N2R8 423 aa23.99■■□□□ 1.43
GPC1-202ENST00000420138 TRPM4Q8TD43 1214 aa23.99■■□□□ 1.43
GPC1-202ENST00000420138 CCDC12Q8WUD4 166 aaPredicted RBP23.99■■□□□ 1.43
GPC1-202ENST00000420138 CEP131Q9UPN4 1083 aa23.99■■□□□ 1.43
GPC1-202ENST00000420138 TMX2Q9Y320 296 aa23.99■■□□□ 1.43
GPC1-202ENST00000420138 SRPRBQ9Y5M8 271 aaKnown RBP23.99■■□□□ 1.43
GPC1-202ENST00000420138 KIAA1755Q5JYT7 1200 aa23.98■■□□□ 1.43
GPC1-202ENST00000420138 CKAP2LQ8IYA6 745 aa23.98■■□□□ 1.43
GPC1-202ENST00000420138 COA7Q96BR5 231 aa23.98■■□□□ 1.43
GPC1-202ENST00000420138 NUP88Q99567 741 aaPredicted RBP23.98■■□□□ 1.43
GPC1-202ENST00000420138 DEFB129Q9H1M3 183 aa23.98■■□□□ 1.43
GPC1-202ENST00000420138 ZBTB5O15062 677 aa23.97■■□□□ 1.43
GPC1-202ENST00000420138 RAD21O60216 631 aa23.97■■□□□ 1.43
GPC1-202ENST00000420138 ZNF174Q15697 407 aa23.97■■□□□ 1.43
GPC1-202ENST00000420138 PPP1R9BQ96SB3 815 aa23.97■■□□□ 1.43
GPC1-202ENST00000420138 C6orf50Q9HD87 102 aa23.97■■□□□ 1.43
GPC1-202ENST00000420138 POLR2AP24928 1970 aaKnown RBP23.97■■□□□ 1.43
GPC1-202ENST00000420138 ZC3H4Q9UPT8 1303 aaKnown RBP23.97■■□□□ 1.43
GPC1-202ENST00000420138 KINO60870 393 aaKnown RBP23.96■■□□□ 1.43
GPC1-202ENST00000420138 GNA11P29992 359 aa23.96■■□□□ 1.43
GPC1-202ENST00000420138 ARHGEF10LQ9HCE6 1279 aa23.96■■□□□ 1.43
GPC1-202ENST00000420138 ZNF202O95125 648 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms