RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 TTLL4Q14679 1199 aa7.85□□□□□ -1.15
NIFKP3-201ENST00000417799 LRRFIP1Q32MZ4 808 aaKnown RBP7.85□□□□□ -1.15
NIFKP3-201ENST00000417799 RBBP8NLQ8NC74 664 aaPredicted RBP7.85□□□□□ -1.15
NIFKP3-201ENST00000417799 C2CD4AQ8NCU7 369 aaPredicted RBP7.85□□□□□ -1.15
NIFKP3-201ENST00000417799 WFDC12Q8WWY7 111 aa7.85□□□□□ -1.15
NIFKP3-201ENST00000417799 GSX1Q9H4S2 264 aaPredicted RBP7.85□□□□□ -1.15
NIFKP3-201ENST00000417799 PIDD1Q9HB75 910 aa7.85□□□□□ -1.15
NIFKP3-201ENST00000417799 ADAM30Q9UKF2 790 aa7.85□□□□□ -1.15
NIFKP3-201ENST00000417799 ACTL7BQ9Y614 415 aa7.85□□□□□ -1.15
NIFKP3-201ENST00000417799 TOPAZ1Q8N9V7 1692 aa7.85□□□□□ -1.15
NIFKP3-201ENST00000417799 CGNL1Q0VF96 1302 aa7.84□□□□□ -1.15
NIFKP3-201ENST00000417799 RNGTTO60942 597 aaKnown RBP7.84□□□□□ -1.15
NIFKP3-201ENST00000417799 GDF11O95390 407 aa7.84□□□□□ -1.15
NIFKP3-201ENST00000417799 HCLS1P14317 486 aaPredicted RBP7.84□□□□□ -1.15
NIFKP3-201ENST00000417799 NOS3P29474 1203 aa7.84□□□□□ -1.15
NIFKP3-201ENST00000417799 PREPP48147 710 aa7.84□□□□□ -1.15
NIFKP3-201ENST00000417799 TMEM201Q5SNT2 666 aa7.84□□□□□ -1.15
NIFKP3-201ENST00000417799 CC2D1BQ5T0F9 858 aaKnown RBP7.84□□□□□ -1.15
NIFKP3-201ENST00000417799 SOGA3Q5TF21 947 aa7.84□□□□□ -1.15
NIFKP3-201ENST00000417799 Q6ZS46 218 aa7.84□□□□□ -1.15
NIFKP3-201ENST00000417799 CKAP2LQ8IYA6 745 aa7.84□□□□□ -1.15
NIFKP3-201ENST00000417799 OR6P1Q8NGX9 317 aa7.84□□□□□ -1.15
NIFKP3-201ENST00000417799 ZNF507Q8TCN5 953 aa7.84□□□□□ -1.15
NIFKP3-201ENST00000417799 EDC4Q6P2E9 1401 aaKnown RBP7.84□□□□□ -1.15
NIFKP3-201ENST00000417799 NPC1L1Q9UHC9 1359 aa7.84□□□□□ -1.16
NIFKP3-201ENST00000417799 ITSN1Q15811 1721 aa7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 TTC21BQ7Z4L5 1316 aa7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 FYB1O15117 783 aa7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 NTF4P34130 210 aa7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 CNGB1Q14028 1251 aaPredicted RBP7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 ADGRE1Q14246 886 aa7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 MBTPS1Q14703 1052 aa7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 BRINP3Q76B58 766 aa7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 CDC37L1Q7L3B6 337 aa7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 LSRQ86X29 649 aaPredicted RBP7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 ANTXR1Q9H6X2 564 aa7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 PRKRIP1Q9H875 184 aaPredicted RBP7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 FAM105AQ9NUU6 356 aa7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 PRKAG3Q9UGI9 489 aa7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 RGPD8O14715 1765 aaPredicted RBP7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 USP6P35125 1406 aa7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 BRD4O60885 1362 aaPredicted RBP7.83□□□□□ -1.16
NIFKP3-201ENST00000417799 TTC21AQ8NDW8 1320 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 IQSEC2Q5JU85 1478 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 MEIS3P2A8K0S8 358 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 GAS2O43903 313 aaKnown RBP7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 TOM1O60784 492 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 NEFMP07197 916 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 USP11P51784 963 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 RALBP1Q15311 655 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 TNNI3KQ59H18 835 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 ANKS3Q6ZW76 656 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 SSH2Q76I76 1423 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 KRT28Q7Z3Y7 464 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 HID1Q8IV36 788 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 FAM169BQ8N8A8 192 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 KCT2Q8NC54 265 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 TMEM40Q8WWA1 233 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 ACSF2Q96CM8 615 aaPredicted RBP7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 UBL7Q96S82 380 aaPredicted RBP7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 SSU72Q9NP77 194 aaKnown RBP7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 GMIPQ9P107 970 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 TJP2Q9UDY2 1190 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 KLHL3Q9UH77 587 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 NSD2O96028 1365 aa7.82□□□□□ -1.16
NIFKP3-201ENST00000417799 NPHP3Q7Z494 1330 aa7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 SLC22A31A6NKX4 558 aa7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 RNF225M0QZC1 329 aaPredicted RBP7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 SMAD7O15105 426 aaKnown RBP7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 MORC1Q86VD1 984 aa7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 NME9Q86XW9 330 aa7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 MCATQ8IVS2 390 aaKnown RBP7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 SMYD4Q8IYR2 804 aaPredicted RBP7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 DDX17Q92841 729 aaKnown RBP7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 ISL2Q96A47 359 aa7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 FAM46AQ96IP4 442 aaKnown RBP7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 LNPKQ9C0E8 428 aa7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 FBRSQ9HAH7 460 aa7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 R3HCC1Q9Y3T6 440 aaKnown RBP7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 AKAP12Q02952 1782 aa7.81□□□□□ -1.16
NIFKP3-201ENST00000417799 KIF1AQ12756 1690 aa7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 CHURC1-FNTBB4DL54 471 aa7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 DNAJA2O60884 412 aa7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 SLC6A19Q695T7 634 aa7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 OVOS1Q6IE37 1185 aa7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 RUFY4Q6ZNE9 571 aa7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 DPH6Q7L8W6 267 aa7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 TXNRD3Q86VQ6 643 aa7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 MRPL41Q8IXM3 137 aaKnown RBP7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 FAM13CQ8NE31 585 aa7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 HNRNPLLQ8WVV9 542 aaKnown RBP7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 ATG4CQ96DT6 458 aa7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 TMEM87BQ96K49 555 aa7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 TM9SF2Q99805 663 aa7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 PCOLCE2Q9UKZ9 415 aa7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 PARD3Q8TEW0 1356 aa7.8□□□□□ -1.16
NIFKP3-201ENST00000417799 MON2Q7Z3U7 1717 aa7.79□□□□□ -1.16
NIFKP3-201ENST00000417799 KRBA1A5PL33 1030 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms