RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 CRAMP1Q96RY5 1269 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 PIGSQ96S52 555 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 BAG1Q99933 345 aaPredicted RBP11.27□□□□□ -0.61
LINC00494-201ENST00000416742 SEC63Q9UGP8 760 aaKnown RBP11.27□□□□□ -0.61
LINC00494-201ENST00000416742 ZNF215Q9UL58 517 aaPredicted RBP11.27□□□□□ -0.61
LINC00494-201ENST00000416742 FRMPD2Q68DX3 1309 aaPredicted RBP11.27□□□□□ -0.61
LINC00494-201ENST00000416742 USP17L5A8MUK1 530 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 IGSF3O75054 1194 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 HOXA10P31260 410 aaPredicted RBP11.27□□□□□ -0.61
LINC00494-201ENST00000416742 LONP1P36776 959 aaKnown RBP11.27□□□□□ -0.61
LINC00494-201ENST00000416742 ATP2B2Q01814 1243 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 SLC27A3Q5K4L6 730 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 CERS3Q8IU89 383 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 RRP36Q96EU6 259 aaKnown RBP11.27□□□□□ -0.61
LINC00494-201ENST00000416742 MTRQ99707 1265 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 DNAI1Q9UI46 699 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 TTF2Q9UNY4 1162 aaKnown RBP11.27□□□□□ -0.61
LINC00494-201ENST00000416742 ROBO3Q96MS0 1386 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 GTPBP6O43824 516 aaPredicted RBP11.26□□□□□ -0.61
LINC00494-201ENST00000416742 NCBP1Q09161 790 aaKnown RBP11.26□□□□□ -0.61
LINC00494-201ENST00000416742 GLIPR1L2Q4G1C9 344 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 PPP4R3BQ5MIZ7 849 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 JAKMIP3Q5VZ66 844 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 ARL6IP4Q66PJ3 421 aaKnown RBP11.26□□□□□ -0.61
LINC00494-201ENST00000416742 PDXDC2PQ6P474 469 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 CLEC10AQ8IUN9 316 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 LRRC47Q8N1G4 583 aaKnown RBP11.26□□□□□ -0.61
LINC00494-201ENST00000416742 LZTS2Q9BRK4 669 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 PODXL2Q9NZ53 605 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 LAMB1P07942 1786 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 DLEC1Q9Y238 1755 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 NR1I3Q14994 352 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 FILIP1LQ4L180 1135 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 PYM1Q9BRP8 204 aaKnown RBP11.26□□□□□ -0.61
LINC00494-201ENST00000416742 TMX1Q9H3N1 280 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 C6orf50Q9HD87 102 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 BIN2Q9UBW5 565 aaPredicted RBP11.26□□□□□ -0.61
LINC00494-201ENST00000416742 LY75O60449 1722 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 CCNT1O60563 726 aaKnown RBP11.26□□□□□ -0.61
LINC00494-201ENST00000416742 CCT6AP40227 531 aaKnown RBP11.26□□□□□ -0.61
LINC00494-201ENST00000416742 NT5C2P49902 561 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 PPFIBP1Q86W92 1011 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 SP8Q8IXZ3 490 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 GPCPD1Q9NPB8 672 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 KCND1Q9NSA2 647 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 GDAQ9Y2T3 454 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 EP400Q96L91 3159 aa11.26□□□□□ -0.61
LINC00494-201ENST00000416742 ZBTB22O15209 634 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 CCP110O43303 1012 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 RPN1P04843 607 aaKnown RBP11.25□□□□□ -0.61
LINC00494-201ENST00000416742 MAST2Q6P0Q8 1798 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 DPP8Q6V1X1 898 aaPredicted RBP11.25□□□□□ -0.61
LINC00494-201ENST00000416742 TC2NQ8N9U0 490 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 FAM163AQ96GL9 167 aaPredicted RBP11.25□□□□□ -0.61
LINC00494-201ENST00000416742 USP40Q9NVE5 1235 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 ZNF219Q9P2Y4 722 aaPredicted RBP11.25□□□□□ -0.61
LINC00494-201ENST00000416742 ARHGAP6O43182 974 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 RAD21O60216 631 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 TBX2Q13207 712 aaPredicted RBP11.25□□□□□ -0.61
LINC00494-201ENST00000416742 GALNT17Q6IS24 598 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 PROM2Q8N271 834 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 IGSF22Q8N9C0 903 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 CCDC12Q8WUD4 166 aaPredicted RBP11.25□□□□□ -0.61
LINC00494-201ENST00000416742 TMX4Q9H1E5 349 aaPredicted RBP11.25□□□□□ -0.61
LINC00494-201ENST00000416742 VPS16Q9H269 839 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 A0A1B0GTH6 734 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 MPHOSPH10O00566 681 aaKnown RBP11.25□□□□□ -0.61
LINC00494-201ENST00000416742 AKR1B1P15121 316 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 NONOQ15233 471 aaKnown RBP eCLIP11.25□□□□□ -0.61
LINC00494-201ENST00000416742 NELFBQ8WX92 580 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 COA7Q96BR5 231 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 SPZ1Q9BXG8 430 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 DISC1Q9NRI5 854 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 SBF2Q86WG5 1849 aa11.25□□□□□ -0.61
LINC00494-201ENST00000416742 GAKO14976 1311 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 M0R2N6 131 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 N4BP3O15049 544 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 ZSCAN12O43309 604 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 SLURP2P0DP57 97 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 GNA11P29992 359 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 KCNJ6P48051 423 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 ZNF622Q969S3 477 aaKnown RBP eCLIP11.24□□□□□ -0.61
LINC00494-201ENST00000416742 COA1Q9GZY4 146 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 PPP2R2CQ9Y2T4 447 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 ATP6V0A2Q9Y487 856 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 AKR1B15C9JRZ8 316 aaPredicted RBP11.24□□□□□ -0.61
LINC00494-201ENST00000416742 PES1O00541 588 aaKnown RBP11.24□□□□□ -0.61
LINC00494-201ENST00000416742 SLU7O95391 586 aaKnown RBP11.24□□□□□ -0.61
LINC00494-201ENST00000416742 ETF1P62495 437 aaKnown RBP11.24□□□□□ -0.61
LINC00494-201ENST00000416742 PAK1Q13153 545 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 CT47A1Q5JQC4 288 aaPredicted RBP11.24□□□□□ -0.61
LINC00494-201ENST00000416742 KRT25Q7Z3Z0 450 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 CERS5Q8N5B7 392 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 ANKRD7Q92527 254 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 DESI2Q9BSY9 194 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 ZMYND12Q9H0C1 365 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 DDX4Q9NQI0 724 aaKnown RBP11.24□□□□□ -0.61
LINC00494-201ENST00000416742 TMEM260Q9NX78 707 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 SNED1Q8TER0 1413 aa11.24□□□□□ -0.61
LINC00494-201ENST00000416742 RBL2Q08999 1139 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms