RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 SBK1Q52WX2 424 aa11.03□□□□□ -0.64
CD44-206ENST00000415148 ANKRD18AQ8IVF6 992 aa11.03□□□□□ -0.64
CD44-206ENST00000415148 NELFBQ8WX92 580 aa11.03□□□□□ -0.64
CD44-206ENST00000415148 NUP88Q99567 741 aaPredicted RBP11.03□□□□□ -0.64
CD44-206ENST00000415148 CDCA7Q9BWT1 371 aaPredicted RBP11.03□□□□□ -0.64
CD44-206ENST00000415148 BLZF1Q9H2G9 400 aa11.03□□□□□ -0.64
CD44-206ENST00000415148 A0A1B0GUL6 1792 aa11.02□□□□□ -0.64
CD44-206ENST00000415148 A0A1W2PQC6 194 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 CTAGE15A4D2H0 777 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 EIF3JO75822 258 aaKnown RBP11.02□□□□□ -0.65
CD44-206ENST00000415148 CTAGE8P0CG41 777 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 KCNB1Q14721 858 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 CLEC4GQ6UXB4 293 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 CTAGE6Q86UF2 777 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 CTAGE4Q8IX94 777 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 C4orf32Q8N8J7 132 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 MTRQ99707 1265 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 HDAC6Q9UBN7 1215 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 ZNF652Q9Y2D9 606 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 WNK3Q9BYP7 1800 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 USP17L12C9JPN9 530 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 USP17L21D6R901 530 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 EEF1GP26641 437 aaKnown RBP11.02□□□□□ -0.65
CD44-206ENST00000415148 GYG1P46976 350 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 DYNLL1P63167 89 aaKnown RBP11.02□□□□□ -0.65
CD44-206ENST00000415148 SLC20A2Q08357 652 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 IL17AQ16552 155 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 PIK3AP1Q6ZUJ8 805 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 NOC3LQ8WTT2 800 aaKnown RBP11.02□□□□□ -0.65
CD44-206ENST00000415148 CHP1Q99653 195 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 VPS16Q9H269 839 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 THAP9Q9H5L6 903 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 REXO2Q9Y3B8 237 aaKnown RBP11.02□□□□□ -0.65
CD44-206ENST00000415148 DOT1LQ8TEK3 1739 aa11.02□□□□□ -0.65
CD44-206ENST00000415148 RGL2O15211 777 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 KRT9P35527 623 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 ACTN2P35609 894 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 ATP6V1AP38606 617 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 CASP8Q14790 479 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 GALNT17Q6IS24 598 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 FBXO33Q7Z6M2 555 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 BLIDQ8IZY5 108 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 OR8K1Q8NGG5 319 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 FAM84BQ96KN1 310 aaPredicted RBP11.01□□□□□ -0.65
CD44-206ENST00000415148 SLF1Q9BQI6 1058 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 CRNKL1Q9BZJ0 848 aaKnown RBP11.01□□□□□ -0.65
CD44-206ENST00000415148 HAUS4Q9H6D7 363 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 ARPP21Q9UBL0 812 aaPredicted RBP11.01□□□□□ -0.65
CD44-206ENST00000415148 MYO6Q9UM54 1294 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 EPN1Q9Y6I3 576 aaPredicted RBP11.01□□□□□ -0.65
CD44-206ENST00000415148 LAMB1P07942 1786 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 SCN7AQ01118 1682 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 COL1A1P02452 1464 aaPredicted RBP11.01□□□□□ -0.65
CD44-206ENST00000415148 LTBP4Q8N2S1 1624 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 CYP2D7A0A087X1C5 515 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 LAD1O00515 517 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 ENC1O14682 589 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 PARP1P09874 1014 aaKnown RBP11.01□□□□□ -0.65
CD44-206ENST00000415148 MCM3P25205 808 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 MCM7P33993 719 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 PRCPP42785 496 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 EVX2Q03828 476 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 UBXN1Q04323 297 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 CCDC178Q5BJE1 867 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 WDR93Q6P2C0 686 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 SRLQ86TD4 932 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 ADSSL1Q8N142 457 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 MB21D1Q8N884 522 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 GOLGA5Q8TBA6 731 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 ANKS1AQ92625 1134 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 NSUN4Q96CB9 384 aaKnown RBP11.01□□□□□ -0.65
CD44-206ENST00000415148 GDAP1L1Q96MZ0 367 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 DNAJC7Q99615 494 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 HINFPQ9BQA5 517 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 TAB2Q9NYJ8 693 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 RSPH14Q9UHP6 348 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 CAPN11Q9UMQ6 739 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 MAPK8IP1Q9UQF2 711 aa11.01□□□□□ -0.65
CD44-206ENST00000415148 RRP15Q9Y3B9 282 aaKnown RBP11.01□□□□□ -0.65
CD44-206ENST00000415148 BAZ2AQ9UIF9 1905 aaKnown RBP11□□□□□ -0.65
CD44-206ENST00000415148 PSMD14O00487 310 aa11□□□□□ -0.65
CD44-206ENST00000415148 SRGAP2O75044 1071 aa11□□□□□ -0.65
CD44-206ENST00000415148 NDUFA10O95299 355 aa11□□□□□ -0.65
CD44-206ENST00000415148 STAT6P42226 847 aa11□□□□□ -0.65
CD44-206ENST00000415148 GNAQP50148 359 aa11□□□□□ -0.65
CD44-206ENST00000415148 AMPD2Q01433 879 aa11□□□□□ -0.65
CD44-206ENST00000415148 STIM1Q13586 685 aa11□□□□□ -0.65
CD44-206ENST00000415148 TSR1Q2NL82 804 aaKnown RBP11□□□□□ -0.65
CD44-206ENST00000415148 CCDC148Q8NFR7 591 aa11□□□□□ -0.65
CD44-206ENST00000415148 ZNF384Q8TF68 577 aa11□□□□□ -0.65
CD44-206ENST00000415148 RIN2Q8WYP3 895 aaPredicted RBP11□□□□□ -0.65
CD44-206ENST00000415148 NUP58Q9BVL2 599 aa11□□□□□ -0.65
CD44-206ENST00000415148 TSPYL1Q9H0U9 437 aa11□□□□□ -0.65
CD44-206ENST00000415148 ACBD3Q9H3P7 528 aa11□□□□□ -0.65
CD44-206ENST00000415148 DCP1AQ9NPI6 582 aaPredicted RBP11□□□□□ -0.65
CD44-206ENST00000415148 PCDHA4Q9UN74 947 aa11□□□□□ -0.65
CD44-206ENST00000415148 MINPP1Q9UNW1 487 aa11□□□□□ -0.65
CD44-206ENST00000415148 MYH13Q9UKX3 1938 aa11□□□□□ -0.65
CD44-206ENST00000415148 LOC102724428A0A0B4J2F2 783 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 LGALS16A8MUM7 142 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms