RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CHADLQ6NUI6 762 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 ZSCAN30Q86W11 494 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 ANKRD13AQ8IZ07 590 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 ADGRF4Q8IZF3 695 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 TNPO1Q92973 898 aaKnown RBP17.93■□□□□ 0.46
SHMT2-202ENST00000414700 WDR18Q9BV38 432 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 RIOX1Q9H6W3 641 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 SH2D4AQ9H788 454 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 EMILIN3Q9NT22 766 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 AFG3L2Q9Y4W6 797 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 PCNTO95613 3336 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 CELF2O95319 508 aaKnown RBP17.93■□□□□ 0.46
SHMT2-202ENST00000414700 BACE1P56817 501 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 AKAP17AQ02040 695 aaKnown RBP17.93■□□□□ 0.46
SHMT2-202ENST00000414700 FERMT3Q86UX7 667 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 C8orf76Q96K31 380 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 PIGSQ96S52 555 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 MAP7D2Q96T17 732 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 SMCHD1A6NHR9 2005 aa17.92■□□□□ 0.46
SHMT2-202ENST00000414700 TCHHQ07283 1943 aa17.92■□□□□ 0.46
SHMT2-202ENST00000414700 KIF3CO14782 793 aa17.92■□□□□ 0.46
SHMT2-202ENST00000414700 HMGCS2P54868 508 aa17.92■□□□□ 0.46
SHMT2-202ENST00000414700 CST9Q5W186 159 aa17.92■□□□□ 0.46
SHMT2-202ENST00000414700 ARMC9Q7Z3E5 817 aa17.92■□□□□ 0.46
SHMT2-202ENST00000414700 FBXO18Q8NFZ0 1043 aa17.92■□□□□ 0.46
SHMT2-202ENST00000414700 GPKOWQ92917 476 aaPredicted RBP eCLIP17.92■□□□□ 0.46
SHMT2-202ENST00000414700 LZTS2Q9BRK4 669 aa17.92■□□□□ 0.46
SHMT2-202ENST00000414700 JMJD4Q9H9V9 463 aa17.92■□□□□ 0.46
SHMT2-202ENST00000414700 AS3MTQ9HBK9 375 aa17.92■□□□□ 0.46
SHMT2-202ENST00000414700 VPS54Q9P1Q0 977 aa17.92■□□□□ 0.46
SHMT2-202ENST00000414700 KIF3AQ9Y496 699 aa17.92■□□□□ 0.46
SHMT2-202ENST00000414700 TRPM7Q96QT4 1865 aa17.91■□□□□ 0.46
SHMT2-202ENST00000414700 H3BQV1 296 aa17.91■□□□□ 0.46
SHMT2-202ENST00000414700 ZSCAN22P10073 491 aaPredicted RBP17.91■□□□□ 0.46
SHMT2-202ENST00000414700 FOXD4L6Q3SYB3 417 aaPredicted RBP17.91■□□□□ 0.46
SHMT2-202ENST00000414700 LDLRAD1Q5T700 205 aa17.91■□□□□ 0.46
SHMT2-202ENST00000414700 IFFO2Q5TF58 517 aa17.91■□□□□ 0.46
SHMT2-202ENST00000414700 FOXD4L3Q6VB84 417 aaPredicted RBP17.91■□□□□ 0.46
SHMT2-202ENST00000414700 OTUD5Q96G74 571 aa17.91■□□□□ 0.46
SHMT2-202ENST00000414700 FBXO28Q9NVF7 368 aa17.91■□□□□ 0.46
SHMT2-202ENST00000414700 KCNJ14Q9UNX9 436 aa17.91■□□□□ 0.46
SHMT2-202ENST00000414700 WDR33Q9C0J8 1336 aaKnown RBP17.91■□□□□ 0.46
SHMT2-202ENST00000414700 IRF6O14896 467 aa17.91■□□□□ 0.46
SHMT2-202ENST00000414700 SCG2P13521 617 aa17.91■□□□□ 0.46
SHMT2-202ENST00000414700 VCAM1P19320 739 aa17.91■□□□□ 0.46
SHMT2-202ENST00000414700 SNAP25P60880 206 aa17.91■□□□□ 0.46
SHMT2-202ENST00000414700 PFKFB3Q16875 520 aaPredicted RBP17.91■□□□□ 0.46
SHMT2-202ENST00000414700 KRT40Q6A162 431 aa17.91■□□□□ 0.46
SHMT2-202ENST00000414700 TYW1BQ6NUM6 668 aa17.91■□□□□ 0.46
SHMT2-202ENST00000414700 SMARCA1P28370 1054 aa17.9■□□□□ 0.46
SHMT2-202ENST00000414700 IKQ13123 557 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-202ENST00000414700 GBA2Q9HCG7 927 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-202ENST00000414700 STAT2P52630 851 aa17.89■□□□□ 0.46
SHMT2-202ENST00000414700 SAMD1Q6SPF0 538 aaPredicted RBP17.89■□□□□ 0.46
SHMT2-202ENST00000414700 RRP36Q96EU6 259 aaKnown RBP17.89■□□□□ 0.46
SHMT2-202ENST00000414700 PARP14Q460N5 1801 aa17.89■□□□□ 0.45
SHMT2-202ENST00000414700 PPP1R11O60927 126 aaPredicted RBP17.89■□□□□ 0.45
SHMT2-202ENST00000414700 F13A1P00488 732 aa17.89■□□□□ 0.45
SHMT2-202ENST00000414700 WWC2Q6AWC2 1192 aa17.89■□□□□ 0.45
SHMT2-202ENST00000414700 FAM173BQ6P4H8 233 aa17.89■□□□□ 0.45
SHMT2-202ENST00000414700 WASF1Q92558 559 aa17.89■□□□□ 0.45
SHMT2-202ENST00000414700 LPAR1Q92633 364 aa17.89■□□□□ 0.45
SHMT2-202ENST00000414700 OPTNQ96CV9 577 aa17.89■□□□□ 0.45
SHMT2-202ENST00000414700 SPDYE5A6NIY4 337 aa17.88■□□□□ 0.45
SHMT2-202ENST00000414700 ADAMTS3O15072 1205 aa17.88■□□□□ 0.45
SHMT2-202ENST00000414700 GJA5P36382 358 aa17.88■□□□□ 0.45
SHMT2-202ENST00000414700 USP14P54578 494 aa17.88■□□□□ 0.45
SHMT2-202ENST00000414700 MCTP1Q6DN14 999 aa17.88■□□□□ 0.45
SHMT2-202ENST00000414700 BTNL9Q6UXG8 535 aa17.88■□□□□ 0.45
SHMT2-202ENST00000414700 HEATR3Q7Z4Q2 680 aa17.88■□□□□ 0.45
SHMT2-202ENST00000414700 ERO1BQ86YB8 467 aa17.88■□□□□ 0.45
SHMT2-202ENST00000414700 ANP32BQ92688 251 aaKnown RBP17.88■□□□□ 0.45
SHMT2-202ENST00000414700 MTMR8Q96EF0 704 aa17.88■□□□□ 0.45
SHMT2-202ENST00000414700 PRDM4Q9UKN5 801 aa17.88■□□□□ 0.45
SHMT2-202ENST00000414700 PRR12Q9ULL5 1215 aa17.88■□□□□ 0.45
SHMT2-202ENST00000414700 WDR46O15213 610 aaKnown RBP17.88■□□□□ 0.45
SHMT2-202ENST00000414700 NASPP49321 788 aaPredicted RBP17.88■□□□□ 0.45
SHMT2-202ENST00000414700 PPATQ06203 517 aa17.88■□□□□ 0.45
SHMT2-202ENST00000414700 SYDE2Q5VT97 1194 aa17.88■□□□□ 0.45
SHMT2-202ENST00000414700 KIFC2Q96AC6 838 aa17.88■□□□□ 0.45
SHMT2-202ENST00000414700 RPAP3Q9H6T3 665 aaPredicted RBP17.88■□□□□ 0.45
SHMT2-202ENST00000414700 SEC63Q9UGP8 760 aaKnown RBP17.88■□□□□ 0.45
SHMT2-202ENST00000414700 RLFQ13129 1914 aa17.87■□□□□ 0.45
SHMT2-202ENST00000414700 KIF28PB7ZC32 967 aa17.87■□□□□ 0.45
SHMT2-202ENST00000414700 TAL1P17542 331 aaPredicted RBP17.87■□□□□ 0.45
SHMT2-202ENST00000414700 MSNP26038 577 aaKnown RBP17.87■□□□□ 0.45
SHMT2-202ENST00000414700 COA7Q96BR5 231 aa17.87■□□□□ 0.45
SHMT2-202ENST00000414700 TANGO6Q9C0B7 1094 aa17.87■□□□□ 0.45
SHMT2-202ENST00000414700 RBM27Q9P2N5 1060 aaKnown RBP17.87■□□□□ 0.45
SHMT2-202ENST00000414700 C19orf81C9J6K1 198 aa17.86■□□□□ 0.45
SHMT2-202ENST00000414700 STXBP3O00186 592 aa17.86■□□□□ 0.45
SHMT2-202ENST00000414700 NPY5RQ15761 445 aa17.86■□□□□ 0.45
SHMT2-202ENST00000414700 CDC37Q16543 378 aaPredicted RBP17.86■□□□□ 0.45
SHMT2-202ENST00000414700 QRICH1Q2TAL8 776 aa17.86■□□□□ 0.45
SHMT2-202ENST00000414700 OXER1Q8TDS5 423 aa17.86■□□□□ 0.45
SHMT2-202ENST00000414700 C12orf42Q96LP6 360 aa17.86■□□□□ 0.45
SHMT2-202ENST00000414700 ZBTB5O15062 677 aa17.86■□□□□ 0.45
SHMT2-202ENST00000414700 MMP1P03956 469 aa17.86■□□□□ 0.45
SHMT2-202ENST00000414700 KIF23Q02241 960 aaPredicted RBP17.86■□□□□ 0.45
SHMT2-202ENST00000414700 RESTQ13127 1097 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms