RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ZNF75DP51815 510 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 RAD51AP2Q09MP3 1159 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 SFMBT2Q5VUG0 894 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 TSKSQ9UJT2 592 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 CLRN2A0PK11 232 aa19.13■□□□□ 0.65
PHRF1-202ENST00000413872 MCM6Q14566 821 aa19.13■□□□□ 0.65
PHRF1-202ENST00000413872 SUSD4Q5VX71 490 aa19.13■□□□□ 0.65
PHRF1-202ENST00000413872 FAM102BQ5T8I3 360 aa19.13■□□□□ 0.65
PHRF1-202ENST00000413872 CTTNBP2NLQ9P2B4 639 aa19.13■□□□□ 0.65
PHRF1-202ENST00000413872 DAPK3O43293 454 aa19.13■□□□□ 0.65
PHRF1-202ENST00000413872 GTPBP6O43824 516 aaPredicted RBP19.13■□□□□ 0.65
PHRF1-202ENST00000413872 FOXP1Q9H334 677 aaPredicted RBP19.13■□□□□ 0.65
PHRF1-202ENST00000413872 METTL14Q9HCE5 456 aaKnown RBP19.13■□□□□ 0.65
PHRF1-202ENST00000413872 KIAA1468Q9P260 1216 aa19.13■□□□□ 0.65
PHRF1-202ENST00000413872 LIG4P49917 911 aa19.13■□□□□ 0.65
PHRF1-202ENST00000413872 SLC27A3Q5K4L6 730 aa19.13■□□□□ 0.65
PHRF1-202ENST00000413872 CFAP58Q5T655 872 aa19.13■□□□□ 0.65
PHRF1-202ENST00000413872 APOA5Q6Q788 366 aa19.13■□□□□ 0.65
PHRF1-202ENST00000413872 FOXP4Q8IVH2 680 aaPredicted RBP19.13■□□□□ 0.65
PHRF1-202ENST00000413872 SECISBP2LQ93073 1101 aaKnown RBP19.13■□□□□ 0.65
PHRF1-202ENST00000413872 CCDC63Q8NA47 563 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 CDHR1Q96JP9 859 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 TLR7Q9NYK1 1049 aaKnown RBP19.12■□□□□ 0.65
PHRF1-202ENST00000413872 NR1I2O75469 434 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 ZNF365Q70YC5 407 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 USP28Q96RU2 1077 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 SRP68Q9UHB9 627 aaKnown RBP19.12■□□□□ 0.65
PHRF1-202ENST00000413872 RNF17Q9BXT8 1623 aaKnown RBP19.12■□□□□ 0.65
PHRF1-202ENST00000413872 ALKQ9UM73 1620 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 PLEKHG2Q9H7P9 1386 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 FAM178BQ8IXR5 827 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 METTL13Q8N6R0 699 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 GPKOWQ92917 476 aaPredicted RBP eCLIP19.12■□□□□ 0.65
PHRF1-202ENST00000413872 BLZF1Q9H2G9 400 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 PALD1Q9ULE6 856 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 MTMR6Q9Y217 621 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 TULP4Q9NRJ4 1543 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 BTBD18B2RXH4 712 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 FAM47CQ5HY64 1035 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 CMTR1Q8N1G2 835 aaKnown RBP19.12■□□□□ 0.65
PHRF1-202ENST00000413872 IPO4Q8TEX9 1081 aaKnown RBP19.12■□□□□ 0.65
PHRF1-202ENST00000413872 MYO3BQ8WXR4 1341 aa19.12■□□□□ 0.65
PHRF1-202ENST00000413872 POLA2Q14181 598 aa19.11■□□□□ 0.65
PHRF1-202ENST00000413872 CCDC125Q86Z20 511 aa19.11■□□□□ 0.65
PHRF1-202ENST00000413872 ATP6V0A1Q93050 837 aa19.11■□□□□ 0.65
PHRF1-202ENST00000413872 PAIP2Q9BPZ3 127 aaKnown RBP19.11■□□□□ 0.65
PHRF1-202ENST00000413872 E7EVH7 732 aa19.11■□□□□ 0.65
PHRF1-202ENST00000413872 ATF7P17544 494 aaPredicted RBP19.11■□□□□ 0.65
PHRF1-202ENST00000413872 MAIP1Q8WWC4 291 aa19.11■□□□□ 0.65
PHRF1-202ENST00000413872 IFT81Q8WYA0 676 aa19.11■□□□□ 0.65
PHRF1-202ENST00000413872 AK8Q96MA6 479 aa19.11■□□□□ 0.65
PHRF1-202ENST00000413872 LMBRD1Q9NUN5 540 aa19.11■□□□□ 0.65
PHRF1-202ENST00000413872 BMP3P12645 472 aa19.11■□□□□ 0.65
PHRF1-202ENST00000413872 RBM6P78332 1123 aaKnown RBP19.11■□□□□ 0.65
PHRF1-202ENST00000413872 PPP2R5AQ15172 486 aa19.11■□□□□ 0.65
PHRF1-202ENST00000413872 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.11■□□□□ 0.65
PHRF1-202ENST00000413872 CLTCL1P53675 1640 aa19.11■□□□□ 0.65
PHRF1-202ENST00000413872 FMNL1O95466 1100 aaPredicted RBP19.1■□□□□ 0.65
PHRF1-202ENST00000413872 CYP21A2P08686 494 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 ATP5DP30049 168 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 ALDH3A1P30838 453 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 EXOC8Q8IYI6 725 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 WDR11Q9BZH6 1224 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 ARMCX3Q9UH62 379 aaPredicted RBP19.1■□□□□ 0.65
PHRF1-202ENST00000413872 UNC13BO14795 1591 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 USP31Q70CQ4 1352 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 TNNC2P02585 160 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 MIS12Q9H081 205 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 PCDHA4Q9UN74 947 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 STAMQ92783 540 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 NACA2Q9H009 215 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 RBSNQ9H1K0 784 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 DMP1Q13316 513 aaPredicted RBP19.1■□□□□ 0.65
PHRF1-202ENST00000413872 TFDP1Q14186 410 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 FAM160B2Q86V87 743 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 CCDC25Q86WR0 208 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 PIM2Q9P1W9 311 aa19.1■□□□□ 0.65
PHRF1-202ENST00000413872 PALM3A6NDB9 673 aaPredicted RBP19.09■□□□□ 0.65
PHRF1-202ENST00000413872 YARSP54577 528 aaKnown RBP19.09■□□□□ 0.65
PHRF1-202ENST00000413872 DYNLL1P63167 89 aaKnown RBP19.09■□□□□ 0.65
PHRF1-202ENST00000413872 PANK4Q9NVE7 773 aa19.09■□□□□ 0.65
PHRF1-202ENST00000413872 CDHR2Q9BYE9 1310 aa19.09■□□□□ 0.65
PHRF1-202ENST00000413872 STAT1P42224 750 aa19.09■□□□□ 0.65
PHRF1-202ENST00000413872 IREB2P48200 963 aaKnown RBP19.09■□□□□ 0.65
PHRF1-202ENST00000413872 DPP9Q86TI2 863 aa19.09■□□□□ 0.65
PHRF1-202ENST00000413872 SOS2Q07890 1332 aaPredicted RBP19.09■□□□□ 0.65
PHRF1-202ENST00000413872 K7ENM7 598 aa19.09■□□□□ 0.65
PHRF1-202ENST00000413872 M0R2C6 588 aa19.09■□□□□ 0.65
PHRF1-202ENST00000413872 PNOCQ13519 176 aa19.09■□□□□ 0.65
PHRF1-202ENST00000413872 AOC3Q16853 763 aa19.09■□□□□ 0.65
PHRF1-202ENST00000413872 NSMCE1Q8WV22 266 aa19.09■□□□□ 0.65
PHRF1-202ENST00000413872 A0A1W2PQ27 194 aa19.08■□□□□ 0.65
PHRF1-202ENST00000413872 A0A1W2PQ64 194 aa19.08■□□□□ 0.65
PHRF1-202ENST00000413872 A0A1W2PQD8 194 aa19.08■□□□□ 0.65
PHRF1-202ENST00000413872 CALRP27797 417 aaKnown RBP19.08■□□□□ 0.65
PHRF1-202ENST00000413872 ABCD1P33897 745 aa19.08■□□□□ 0.65
PHRF1-202ENST00000413872 KCNQ4P56696 695 aa19.08■□□□□ 0.65
PHRF1-202ENST00000413872 FAM26FQ5R3K3 315 aa19.08■□□□□ 0.65
PHRF1-202ENST00000413872 CROCCP2Q86T23 111 aa19.08■□□□□ 0.65
PHRF1-202ENST00000413872 RAB3IL1Q8TBN0 382 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms