RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 SPDYE1Q8NFV5 336 aaPredicted RBP9.39□□□□□ -0.91
PBRM1-209ENST00000412587 P3H4Q92791 437 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 CD248Q9HCU0 757 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 CCDC122Q5T0U0 273 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 PLA2G4DQ86XP0 818 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 MYLK4Q86YV6 388 aaPredicted RBP9.39□□□□□ -0.91
PBRM1-209ENST00000412587 CCDC197Q8NCU1 140 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 CNKSR1Q969H4 720 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 STX10O60499 249 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 FERP16591 822 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 BCAMP50895 628 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 DNA2P51530 1060 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 CHRNDQ07001 517 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 LETM2Q2VYF4 491 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 HSP90AA5PQ58FG0 334 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 USP37Q86T82 979 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 TEKT1Q969V4 418 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 THOC1Q96FV9 657 aaKnown RBP9.38□□□□□ -0.91
PBRM1-209ENST00000412587 PDE8BO95263 885 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 PDE6AP16499 860 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 SLC1A4P43007 532 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 PHLDB3Q6NSJ2 640 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 MIER3Q7Z3K6 550 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 ARHGAP22Q7Z5H3 698 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 IGSF22Q8N9C0 903 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 PIGBQ92521 554 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 NAP1L4Q99733 375 aaKnown RBP9.38□□□□□ -0.91
PBRM1-209ENST00000412587 TPCN1Q9ULQ1 816 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 BCS1LQ9Y276 419 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 SH3BP1Q9Y3L3 701 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 ADGRL3Q9HAR2 1447 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 RASSF2P50749 326 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 TNNC1P63316 161 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 COG7P83436 770 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 TFAP4Q01664 338 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 PDE1CQ14123 709 aaPredicted RBP9.38□□□□□ -0.91
PBRM1-209ENST00000412587 PPP2R5BQ15173 497 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 HSP90AA4PQ58FG1 418 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 AKNAD1Q5T1N1 836 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 RGL1Q9NZL6 768 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 DAAM1Q9Y4D1 1078 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 SAR1BQ9Y6B6 198 aa9.38□□□□□ -0.91
PBRM1-209ENST00000412587 USP27XA6NNY8 438 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 USP17L12C9JPN9 530 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 USP17L21D6R901 530 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 STXBP3O00186 592 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 KRT13P13646 458 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 PAPOLAP51003 745 aaKnown RBP9.37□□□□□ -0.91
PBRM1-209ENST00000412587 ZNF174Q15697 407 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 ZYXQ15942 572 aaKnown RBP9.37□□□□□ -0.91
PBRM1-209ENST00000412587 VSIG1Q86XK7 387 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 TMTC1Q8IUR5 882 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 FGD4Q96M96 766 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 USP40Q9NVE5 1235 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 TMOD4Q9NZQ9 345 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 SATB2Q9UPW6 733 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 THRAP3Q9Y2W1 955 aaKnown RBP9.37□□□□□ -0.91
PBRM1-209ENST00000412587 HEG1Q9ULI3 1381 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 CLTCL1P53675 1640 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 ZNF521Q96K83 1311 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 AKR1B10O60218 316 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 SKIP12755 728 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 KCNQ4P56696 695 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 LRRC31Q6UY01 552 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 MFN1Q8IWA4 741 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 USP6NLQ92738 828 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 HAUS7Q99871 368 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 MMRN2Q9H8L6 949 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 PECAM1P16284 738 aaPredicted RBP9.37□□□□□ -0.91
PBRM1-209ENST00000412587 PLCB4Q15147 1175 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 CROCCP2Q86T23 111 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 DIS3L2Q8IYB7 885 aaKnown RBP9.37□□□□□ -0.91
PBRM1-209ENST00000412587 MYL10Q9BUA6 226 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 OSBPL1AQ9BXW6 950 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 TM6SF1Q9BZW5 370 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 RNF17Q9BXT8 1623 aaKnown RBP9.37□□□□□ -0.91
PBRM1-209ENST00000412587 VWA3AA6NCI4 1184 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 E7EWF7 191 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 BACH1O14867 736 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 NLRP12P59046 1061 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 CYP26C1Q6V0L0 522 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 TRIM42Q8IWZ5 723 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 SEPT12Q8IYM1 358 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 TEX9Q8N6V9 391 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 UBLCP1Q8WVY7 318 aaPredicted RBP9.37□□□□□ -0.91
PBRM1-209ENST00000412587 PUS3Q9BZE2 481 aaKnown RBP9.37□□□□□ -0.91
PBRM1-209ENST00000412587 TSGA10Q9BZW7 698 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 GLT8D2Q9H1C3 349 aa9.37□□□□□ -0.91
PBRM1-209ENST00000412587 A0A0D9SFI3 127 aa9.36□□□□□ -0.91
PBRM1-209ENST00000412587 FAM13AO94988 1023 aa9.36□□□□□ -0.91
PBRM1-209ENST00000412587 TBC1D8O95759 1140 aa9.36□□□□□ -0.91
PBRM1-209ENST00000412587 CUL4AQ13619 759 aa9.36□□□□□ -0.91
PBRM1-209ENST00000412587 GRAMD4Q6IC98 578 aa9.36□□□□□ -0.91
PBRM1-209ENST00000412587 TSPYL2Q9H2G4 693 aaPredicted RBP9.36□□□□□ -0.91
PBRM1-209ENST00000412587 ZNF408Q9H9D4 720 aa9.36□□□□□ -0.91
PBRM1-209ENST00000412587 CTTNBP2NLQ9P2B4 639 aa9.36□□□□□ -0.91
PBRM1-209ENST00000412587 ARPP21Q9UBL0 812 aaPredicted RBP9.36□□□□□ -0.91
PBRM1-209ENST00000412587 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.36□□□□□ -0.91
PBRM1-209ENST00000412587 H7C1D1 291 aa9.36□□□□□ -0.91
PBRM1-209ENST00000412587 CYP27B1O15528 508 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms