RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 PLA2G6O60733 806 aa20.54■□□□□ 0.88
HSPG2-204ENST00000412328 SGPL1O95470 568 aa20.54■□□□□ 0.88
HSPG2-204ENST00000412328 SLC25A27O95847 323 aa20.54■□□□□ 0.88
HSPG2-204ENST00000412328 CACNB2Q08289 660 aaPredicted RBP20.54■□□□□ 0.88
HSPG2-204ENST00000412328 SAMD1Q6SPF0 538 aaPredicted RBP20.54■□□□□ 0.88
HSPG2-204ENST00000412328 CCAR1Q8IX12 1150 aaKnown RBP20.54■□□□□ 0.88
HSPG2-204ENST00000412328 RNF41Q9H4P4 317 aaPredicted RBP20.54■□□□□ 0.88
HSPG2-204ENST00000412328 RIPK3Q9Y572 518 aa20.54■□□□□ 0.88
HSPG2-204ENST00000412328 TAF6LQ9Y6J9 622 aa20.54■□□□□ 0.88
HSPG2-204ENST00000412328 IVNS1ABPQ9Y6Y0 642 aa20.54■□□□□ 0.88
HSPG2-204ENST00000412328 STRNO43815 780 aa20.53■□□□□ 0.88
HSPG2-204ENST00000412328 STAT3P40763 770 aa20.53■□□□□ 0.88
HSPG2-204ENST00000412328 NT5C2P49902 561 aa20.53■□□□□ 0.88
HSPG2-204ENST00000412328 MNX1P50219 401 aaPredicted RBP20.53■□□□□ 0.88
HSPG2-204ENST00000412328 PLS1Q14651 629 aa20.53■□□□□ 0.88
HSPG2-204ENST00000412328 NCAPG2Q86XI2 1143 aa20.53■□□□□ 0.88
HSPG2-204ENST00000412328 DEFB118Q96PH6 123 aa20.53■□□□□ 0.88
HSPG2-204ENST00000412328 TEX13BQ9BXU2 312 aa20.53■□□□□ 0.88
HSPG2-204ENST00000412328 CEP290O15078 2479 aa20.52■□□□□ 0.88
HSPG2-204ENST00000412328 TMEM232C9JQI7 657 aa20.52■□□□□ 0.88
HSPG2-204ENST00000412328 SNHG28P0DPA3 235 aa20.52■□□□□ 0.88
HSPG2-204ENST00000412328 TOP1P11387 765 aaKnown RBP20.52■□□□□ 0.88
HSPG2-204ENST00000412328 MCCP23508 829 aa20.52■□□□□ 0.88
HSPG2-204ENST00000412328 CCND3P30281 292 aaPredicted RBP20.52■□□□□ 0.88
HSPG2-204ENST00000412328 SLC1A4P43007 532 aa20.52■□□□□ 0.88
HSPG2-204ENST00000412328 STAT2P52630 851 aa20.52■□□□□ 0.88
HSPG2-204ENST00000412328 OLFML2BQ68BL8 750 aa20.52■□□□□ 0.88
HSPG2-204ENST00000412328 SNRNP48Q6IEG0 339 aaKnown RBP20.52■□□□□ 0.88
HSPG2-204ENST00000412328 KIFC2Q96AC6 838 aa20.52■□□□□ 0.88
HSPG2-204ENST00000412328 TOMM22Q9NS69 142 aa20.52■□□□□ 0.88
HSPG2-204ENST00000412328 B4E1Z4 1266 aa20.51■□□□□ 0.87
HSPG2-204ENST00000412328 KDM4AO75164 1064 aa20.51■□□□□ 0.87
HSPG2-204ENST00000412328 CYP21A2P08686 494 aa20.51■□□□□ 0.87
HSPG2-204ENST00000412328 CYBAP13498 195 aa20.51■□□□□ 0.87
HSPG2-204ENST00000412328 OAZ1P54368 228 aa20.51■□□□□ 0.87
HSPG2-204ENST00000412328 IMMTQ16891 758 aaKnown RBP20.51■□□□□ 0.87
HSPG2-204ENST00000412328 BMP2KLQ5H9B9 411 aa20.51■□□□□ 0.87
HSPG2-204ENST00000412328 KCTD1Q719H9 257 aa20.51■□□□□ 0.87
HSPG2-204ENST00000412328 TRPV1Q8NER1 839 aa20.51■□□□□ 0.87
HSPG2-204ENST00000412328 DCAF4Q8WV16 495 aa20.51■□□□□ 0.87
HSPG2-204ENST00000412328 ESR2Q92731 530 aa20.51■□□□□ 0.87
HSPG2-204ENST00000412328 PDHBP11177 359 aa20.5■□□□□ 0.87
HSPG2-204ENST00000412328 COPB2P35606 906 aa20.5■□□□□ 0.87
HSPG2-204ENST00000412328 LHX8Q68G74 356 aa20.5■□□□□ 0.87
HSPG2-204ENST00000412328 BTNL9Q6UXG8 535 aa20.5■□□□□ 0.87
HSPG2-204ENST00000412328 FAM160B2Q86V87 743 aa20.5■□□□□ 0.87
HSPG2-204ENST00000412328 MAML3Q96JK9 1138 aa20.5■□□□□ 0.87
HSPG2-204ENST00000412328 TTC14Q96N46 770 aa20.5■□□□□ 0.87
HSPG2-204ENST00000412328 ZKSCAN3Q9BRR0 538 aa20.5■□□□□ 0.87
HSPG2-204ENST00000412328 CWC22Q9HCG8 908 aaKnown RBP20.5■□□□□ 0.87
HSPG2-204ENST00000412328 HMX1Q9NP08 348 aaPredicted RBP20.5■□□□□ 0.87
HSPG2-204ENST00000412328 CTNNA3Q9UI47 895 aa20.5■□□□□ 0.87
HSPG2-204ENST00000412328 DNAJC25-GNG10A0A024R161 153 aa20.49■□□□□ 0.87
HSPG2-204ENST00000412328 ZNF792Q3KQV3 632 aa20.49■□□□□ 0.87
HSPG2-204ENST00000412328 STOX1Q6ZVD7 989 aa20.49■□□□□ 0.87
HSPG2-204ENST00000412328 RUFY2Q8WXA3 655 aa20.49■□□□□ 0.87
HSPG2-204ENST00000412328 ANKS1AQ92625 1134 aa20.49■□□□□ 0.87
HSPG2-204ENST00000412328 CHMP4CQ96CF2 233 aa20.49■□□□□ 0.87
HSPG2-204ENST00000412328 FGD4Q96M96 766 aa20.49■□□□□ 0.87
HSPG2-204ENST00000412328 MMP19Q99542 508 aa20.49■□□□□ 0.87
HSPG2-204ENST00000412328 RAVER2Q9HCJ3 691 aaKnown RBP20.49■□□□□ 0.87
HSPG2-204ENST00000412328 OGDHLQ9ULD0 1010 aa20.49■□□□□ 0.87
HSPG2-204ENST00000412328 PRR12Q9ULL5 1215 aa20.49■□□□□ 0.87
HSPG2-204ENST00000412328 DNAH12Q6ZR08 3092 aa20.48■□□□□ 0.87
HSPG2-204ENST00000412328 FARP2O94887 1054 aaPredicted RBP20.48■□□□□ 0.87
HSPG2-204ENST00000412328 PGK2P07205 417 aa20.48■□□□□ 0.87
HSPG2-204ENST00000412328 FCER1AP12319 257 aa20.48■□□□□ 0.87
HSPG2-204ENST00000412328 CYP2C19P33261 490 aa20.48■□□□□ 0.87
HSPG2-204ENST00000412328 TTBK2Q6IQ55 1244 aa20.48■□□□□ 0.87
HSPG2-204ENST00000412328 DGKHQ86XP1 1220 aa20.48■□□□□ 0.87
HSPG2-204ENST00000412328 ENAHQ8N8S7 591 aaPredicted RBP20.48■□□□□ 0.87
HSPG2-204ENST00000412328 DIS3LQ8TF46 1054 aaKnown RBP20.48■□□□□ 0.87
HSPG2-204ENST00000412328 MAP4K1Q92918 833 aa20.48■□□□□ 0.87
HSPG2-204ENST00000412328 LSG1Q9H089 658 aaKnown RBP20.48■□□□□ 0.87
HSPG2-204ENST00000412328 ZSWIM5Q9P217 1185 aa20.48■□□□□ 0.87
HSPG2-204ENST00000412328 TNKSO95271 1327 aa20.48■□□□□ 0.87
HSPG2-204ENST00000412328 FDX1P10109 184 aa20.47■□□□□ 0.87
HSPG2-204ENST00000412328 CAPN2P17655 700 aa20.47■□□□□ 0.87
HSPG2-204ENST00000412328 SEC23AQ15436 765 aa20.47■□□□□ 0.87
HSPG2-204ENST00000412328 CYB5R4Q7L1T6 521 aa20.47■□□□□ 0.87
HSPG2-204ENST00000412328 ESYT1Q9BSJ8 1104 aa20.47■□□□□ 0.87
HSPG2-204ENST00000412328 RANBP17Q9H2T7 1088 aaKnown RBP20.47■□□□□ 0.87
HSPG2-204ENST00000412328 LTBP2Q14767 1821 aa20.46■□□□□ 0.87
HSPG2-204ENST00000412328 ZBED4O75132 1171 aa20.46■□□□□ 0.87
HSPG2-204ENST00000412328 TAL1P17542 331 aaPredicted RBP20.46■□□□□ 0.87
HSPG2-204ENST00000412328 ZNF543Q08ER8 600 aa20.46■□□□□ 0.87
HSPG2-204ENST00000412328 PRPF38BQ5VTL8 546 aaKnown RBP20.46■□□□□ 0.87
HSPG2-204ENST00000412328 DPP9Q86TI2 863 aa20.46■□□□□ 0.87
HSPG2-204ENST00000412328 CPXCR1Q8N123 301 aa20.46■□□□□ 0.87
HSPG2-204ENST00000412328 ANKLE1Q8NAG6 615 aa20.46■□□□□ 0.87
HSPG2-204ENST00000412328 CHURC1Q8WUH1 139 aa20.46■□□□□ 0.87
HSPG2-204ENST00000412328 ZSCAN10Q96SZ4 725 aaPredicted RBP20.46■□□□□ 0.87
HSPG2-204ENST00000412328 CNNM2Q9H8M5 875 aa20.46■□□□□ 0.87
HSPG2-204ENST00000412328 DIS3Q9Y2L1 958 aaKnown RBP20.46■□□□□ 0.87
HSPG2-204ENST00000412328 U3KPZ7 1027 aaPredicted RBP20.46■□□□□ 0.87
HSPG2-204ENST00000412328 FRMPD2Q68DX3 1309 aaPredicted RBP20.46■□□□□ 0.87
HSPG2-204ENST00000412328 KCTD2Q14681 263 aa20.45■□□□□ 0.86
HSPG2-204ENST00000412328 CCDC96Q2M329 555 aa20.45■□□□□ 0.86
HSPG2-204ENST00000412328 MFSD14CQ5VZR4 134 aa20.45■□□□□ 0.86
HSPG2-204ENST00000412328 AGBL1Q96MI9 1066 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms