RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 MTMR2Q13614 643 aa10.24□□□□□ -0.77
LINC02539-201ENST00000411615 GPATCH4Q5T3I0 446 aaKnown RBP10.24□□□□□ -0.77
LINC02539-201ENST00000411615 SLFN13Q68D06 897 aa10.24□□□□□ -0.77
LINC02539-201ENST00000411615 NFXL1Q6ZNB6 911 aa10.24□□□□□ -0.77
LINC02539-201ENST00000411615 RASAL3Q86YV0 1011 aa10.24□□□□□ -0.77
LINC02539-201ENST00000411615 CLEC10AQ8IUN9 316 aa10.24□□□□□ -0.77
LINC02539-201ENST00000411615 ZNF654Q8IZM8 581 aa10.24□□□□□ -0.77
LINC02539-201ENST00000411615 TCEANC2Q96MN5 208 aa10.24□□□□□ -0.77
LINC02539-201ENST00000411615 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.24□□□□□ -0.77
LINC02539-201ENST00000411615 KLF18A0A0U1RQI7 1052 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 CCDC196A0A1B0GTZ2 297 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 PALM3A6NDB9 673 aaPredicted RBP10.23□□□□□ -0.77
LINC02539-201ENST00000411615 TRIM75PA6NK02 468 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 WDR46O15213 610 aaKnown RBP10.23□□□□□ -0.77
LINC02539-201ENST00000411615 ZBTB43O43298 467 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 NDUFB10O96000 172 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 PDHBP11177 359 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 CETPP11597 493 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 PDIA3P30101 505 aaKnown RBP10.23□□□□□ -0.77
LINC02539-201ENST00000411615 HOXA7P31268 230 aaPredicted RBP10.23□□□□□ -0.77
LINC02539-201ENST00000411615 KIF5BP33176 963 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 GNAQP50148 359 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 GRM4Q14833 912 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 ASPRV1Q53RT3 343 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 CCDC84Q86UT8 332 aaPredicted RBP10.23□□□□□ -0.77
LINC02539-201ENST00000411615 FANCBQ8NB91 859 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 DDX27Q96GQ7 796 aaKnown RBP10.23□□□□□ -0.77
LINC02539-201ENST00000411615 LZTS2Q9BRK4 669 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 SENP2Q9HC62 589 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 ZCCHC17Q9NP64 241 aaKnown RBP10.23□□□□□ -0.77
LINC02539-201ENST00000411615 SH2B1Q9NRF2 756 aaPredicted RBP10.23□□□□□ -0.77
LINC02539-201ENST00000411615 TMOD4Q9NZQ9 345 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 BRPF3Q9ULD4 1205 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 SLC45A1Q9Y2W3 748 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 LOC285556D6RIA3 1793 aa10.23□□□□□ -0.77
LINC02539-201ENST00000411615 PFKFB2O60825 505 aa10.22□□□□□ -0.77
LINC02539-201ENST00000411615 SLC1A4P43007 532 aa10.22□□□□□ -0.77
LINC02539-201ENST00000411615 ZNF543Q08ER8 600 aa10.22□□□□□ -0.77
LINC02539-201ENST00000411615 APOBRQ0VD83 1088 aa10.22□□□□□ -0.77
LINC02539-201ENST00000411615 NOGQ13253 232 aa10.22□□□□□ -0.77
LINC02539-201ENST00000411615 PABPC4Q13310 644 aaKnown RBP eCLIP10.22□□□□□ -0.77
LINC02539-201ENST00000411615 MOGSQ13724 837 aa10.22□□□□□ -0.77
LINC02539-201ENST00000411615 BTNL9Q6UXG8 535 aa10.22□□□□□ -0.77
LINC02539-201ENST00000411615 LRRC47Q8N1G4 583 aaKnown RBP10.22□□□□□ -0.77
LINC02539-201ENST00000411615 CTCFLQ8NI51 663 aaPredicted RBP10.22□□□□□ -0.77
LINC02539-201ENST00000411615 RBM28Q9NW13 759 aaKnown RBP10.22□□□□□ -0.77
LINC02539-201ENST00000411615 TPCN1Q9ULQ1 816 aa10.22□□□□□ -0.77
LINC02539-201ENST00000411615 USP17L15C9J2P7 530 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 USP17L13C9JLJ4 530 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 USP17L11C9JVI0 530 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 USP17L18D6R9N7 530 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 USP17L22D6RA61 530 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 USP17L17D6RBQ6 530 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 USP17L19D6RCP7 530 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 USP17L20D6RJB6 530 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 DHX16O60231 1041 aaKnown RBP10.21□□□□□ -0.77
LINC02539-201ENST00000411615 PARP1P09874 1014 aaKnown RBP10.21□□□□□ -0.77
LINC02539-201ENST00000411615 FDX1P10109 184 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 BMP3P12645 472 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 HSPA6P17066 643 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 VCAM1P19320 739 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 MAP2K2P36507 400 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 TM4SF4P48230 202 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 HMGCS2P54868 508 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 USP17L24Q0WX57 530 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 SREBF2Q12772 1141 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 KIAA1755Q5JYT7 1200 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 ANKRD23Q86SG2 305 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 FAM160B2Q86V87 743 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 CHURC1Q8WUH1 139 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 MAD2L2Q9UI95 211 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 FEM1BQ9UK73 627 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 AGTPBP1Q9UPW5 1226 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 HPS5Q9UPZ3 1129 aa10.21□□□□□ -0.77
LINC02539-201ENST00000411615 MYPNQ86TC9 1320 aa10.21□□□□□ -0.78
LINC02539-201ENST00000411615 GOLGA8BA8MQT2 603 aa10.2□□□□□ -0.78
LINC02539-201ENST00000411615 KLRF2D3W0D1 207 aa10.2□□□□□ -0.78
LINC02539-201ENST00000411615 METAP2P50579 478 aaKnown RBP eCLIP10.2□□□□□ -0.78
LINC02539-201ENST00000411615 MFSD10Q14728 455 aa10.2□□□□□ -0.78
LINC02539-201ENST00000411615 COG2Q14746 738 aa10.2□□□□□ -0.78
LINC02539-201ENST00000411615 ME3Q16798 604 aa10.2□□□□□ -0.78
LINC02539-201ENST00000411615 RTN1Q16799 776 aa10.2□□□□□ -0.78
LINC02539-201ENST00000411615 GPAT2Q6NUI2 795 aa10.2□□□□□ -0.78
LINC02539-201ENST00000411615 CATSPERGQ6ZRH7 1159 aa10.2□□□□□ -0.78
LINC02539-201ENST00000411615 PRPF38AQ8NAV1 312 aaKnown RBP10.2□□□□□ -0.78
LINC02539-201ENST00000411615 BRI3BPQ8WY22 251 aa10.2□□□□□ -0.78
LINC02539-201ENST00000411615 CAPNS2Q96L46 248 aa10.2□□□□□ -0.78
LINC02539-201ENST00000411615 SPZ1Q9BXG8 430 aa10.2□□□□□ -0.78
LINC02539-201ENST00000411615 SLKQ9H2G2 1235 aaPredicted RBP10.2□□□□□ -0.78
LINC02539-201ENST00000411615 FAM217BQ9NTX9 383 aaPredicted RBP10.2□□□□□ -0.78
LINC02539-201ENST00000411615 HOXC10Q9NYD6 342 aa10.2□□□□□ -0.78
LINC02539-201ENST00000411615 ADAMTS5Q9UNA0 930 aa10.2□□□□□ -0.78
LINC02539-201ENST00000411615 PARP14Q460N5 1801 aa10.19□□□□□ -0.78
LINC02539-201ENST00000411615 WDR33Q9C0J8 1336 aaKnown RBP10.19□□□□□ -0.78
LINC02539-201ENST00000411615 CCL15-CCL14A0A0B4J2E2 113 aa10.19□□□□□ -0.78
LINC02539-201ENST00000411615 GOLGA8AA7E2F4 631 aa10.19□□□□□ -0.78
LINC02539-201ENST00000411615 CD2BP2O95400 341 aaKnown RBP10.19□□□□□ -0.78
LINC02539-201ENST00000411615 OSBPP22059 807 aa10.19□□□□□ -0.78
LINC02539-201ENST00000411615 STAT2P52630 851 aa10.19□□□□□ -0.78
LINC02539-201ENST00000411615 ZYXQ15942 572 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms