RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 GALNT17Q6IS24 598 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 NCAPG2Q86XI2 1143 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 PANK4Q9NVE7 773 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 SEPT6Q14141 434 aa20.21■□□□□ 0.83
HCG11-201ENST00000411553 ME3Q16798 604 aa20.21■□□□□ 0.83
HCG11-201ENST00000411553 HGSO14964 777 aaPredicted RBP20.21■□□□□ 0.83
HCG11-201ENST00000411553 ABL1P00519 1130 aa20.21■□□□□ 0.83
HCG11-201ENST00000411553 OR52Z1P0C646 297 aa20.21■□□□□ 0.83
HCG11-201ENST00000411553 SATB1Q01826 763 aa20.21■□□□□ 0.83
HCG11-201ENST00000411553 SEPT14Q6ZU15 432 aa20.21■□□□□ 0.83
HCG11-201ENST00000411553 DDX25Q9UHL0 483 aaKnown RBP20.21■□□□□ 0.83
HCG11-201ENST00000411553 ABCB4P21439 1286 aa20.21■□□□□ 0.83
HCG11-201ENST00000411553 CTAGE3PQ8IX95 158 aa20.21■□□□□ 0.83
HCG11-201ENST00000411553 PALM2Q8IXS6 379 aa20.21■□□□□ 0.83
HCG11-201ENST00000411553 TNKSO95271 1327 aa20.21■□□□□ 0.83
HCG11-201ENST00000411553 ZMYM6O95789 1325 aa20.21■□□□□ 0.83
HCG11-201ENST00000411553 PFKFB1P16118 471 aa20.21■□□□□ 0.83
HCG11-201ENST00000411553 KRT26Q7Z3Y9 468 aa20.21■□□□□ 0.83
HCG11-201ENST00000411553 SULF1Q8IWU6 871 aa20.21■□□□□ 0.83
HCG11-201ENST00000411553 CNKSR1Q969H4 720 aa20.21■□□□□ 0.83
HCG11-201ENST00000411553 ARHGAP27Q6ZUM4 889 aa20.2■□□□□ 0.82
HCG11-201ENST00000411553 SUGCTQ9HAC7 445 aa20.2■□□□□ 0.82
HCG11-201ENST00000411553 ARMCX3Q9UH62 379 aaPredicted RBP20.2■□□□□ 0.82
HCG11-201ENST00000411553 GBP6Q6ZN66 633 aa20.2■□□□□ 0.82
HCG11-201ENST00000411553 C10orf67Q8IYJ2 551 aa20.2■□□□□ 0.82
HCG11-201ENST00000411553 MORC3Q14149 939 aa20.2■□□□□ 0.82
HCG11-201ENST00000411553 KRBA2Q6ZNG9 492 aa20.2■□□□□ 0.82
HCG11-201ENST00000411553 PLA2G4DQ86XP0 818 aa20.2■□□□□ 0.82
HCG11-201ENST00000411553 FAM178BQ8IXR5 827 aa20.2■□□□□ 0.82
HCG11-201ENST00000411553 HESX1Q9UBX0 185 aa20.2■□□□□ 0.82
HCG11-201ENST00000411553 CASQ2O14958 399 aaPredicted RBP20.2■□□□□ 0.82
HCG11-201ENST00000411553 SCG2P13521 617 aa20.2■□□□□ 0.82
HCG11-201ENST00000411553 PDZD4Q76G19 769 aaPredicted RBP20.2■□□□□ 0.82
HCG11-201ENST00000411553 MIS12Q9H081 205 aa20.2■□□□□ 0.82
HCG11-201ENST00000411553 DDAH1O94760 285 aa20.2■□□□□ 0.82
HCG11-201ENST00000411553 PCCAP05165 728 aaPredicted RBP20.2■□□□□ 0.82
HCG11-201ENST00000411553 PCK1P35558 622 aa20.2■□□□□ 0.82
HCG11-201ENST00000411553 RIC8AQ9NPQ8 531 aa20.2■□□□□ 0.82
HCG11-201ENST00000411553 NRBP2Q9NSY0 501 aa20.2■□□□□ 0.82
HCG11-201ENST00000411553 KIAA0556O60303 1618 aa20.19■□□□□ 0.82
HCG11-201ENST00000411553 DTNBO60941 627 aa20.19■□□□□ 0.82
HCG11-201ENST00000411553 TMOD1P28289 359 aa20.19■□□□□ 0.82
HCG11-201ENST00000411553 VCXQ9H320 206 aa20.19■□□□□ 0.82
HCG11-201ENST00000411553 IFNB1P01574 187 aa20.19■□□□□ 0.82
HCG11-201ENST00000411553 PDE6CP51160 858 aa20.19■□□□□ 0.82
HCG11-201ENST00000411553 CHRNDQ07001 517 aa20.19■□□□□ 0.82
HCG11-201ENST00000411553 DMP1Q13316 513 aaPredicted RBP20.19■□□□□ 0.82
HCG11-201ENST00000411553 GRK7Q8WTQ7 553 aa20.19■□□□□ 0.82
HCG11-201ENST00000411553 HAUS1Q96CS2 278 aa20.19■□□□□ 0.82
HCG11-201ENST00000411553 KRT12Q99456 494 aa20.19■□□□□ 0.82
HCG11-201ENST00000411553 ZNF277Q9NRM2 450 aaPredicted RBP20.19■□□□□ 0.82
HCG11-201ENST00000411553 GOLGA8HP0CJ92 632 aa20.19■□□□□ 0.82
HCG11-201ENST00000411553 OR8K1Q8NGG5 319 aa20.19■□□□□ 0.82
HCG11-201ENST00000411553 ELF2Q15723 593 aa20.19■□□□□ 0.82
HCG11-201ENST00000411553 SLFN13Q68D06 897 aa20.19■□□□□ 0.82
HCG11-201ENST00000411553 THRAP3Q9Y2W1 955 aaKnown RBP20.19■□□□□ 0.82
HCG11-201ENST00000411553 COL4A3BPQ9Y5P4 624 aa20.19■□□□□ 0.82
HCG11-201ENST00000411553 PPFIA1Q13136 1202 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 KRT71Q3SY84 523 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 TTLL7Q6ZT98 887 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 MAST1Q9Y2H9 1570 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 ANKRD20A3Q5VUR7 823 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 FAM160B1Q5W0V3 765 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 LMNTD2Q8IXW0 634 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 TRIM58Q8NG06 486 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 XPO4Q9C0E2 1151 aaKnown RBP20.18■□□□□ 0.82
HCG11-201ENST00000411553 LARSQ9P2J5 1176 aaKnown RBP20.18■□□□□ 0.82
HCG11-201ENST00000411553 FAM170AA1A519 330 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 TMEM232C9JQI7 657 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 TMEM191BP0C7N4 346 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 RAB3IPQ96QF0 476 aaPredicted RBP20.18■□□□□ 0.82
HCG11-201ENST00000411553 PLEKHG3A1L390 1219 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 POLGP54098 1239 aaPredicted RBP20.18■□□□□ 0.82
HCG11-201ENST00000411553 ADKP55263 362 aaKnown RBP20.18■□□□□ 0.82
HCG11-201ENST00000411553 SAR1BQ9Y6B6 198 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 ZMYM4Q5VZL5 1548 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 A0A0D9SFI3 127 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 SPDYE16A6NNV3 312 aaPredicted RBP20.18■□□□□ 0.82
HCG11-201ENST00000411553 PHBP35232 272 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 SPDYE2Q495Y8 402 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 GPKOWQ92917 476 aaPredicted RBP eCLIP20.18■□□□□ 0.82
HCG11-201ENST00000411553 CABS1Q96KC9 395 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 RPGRIP1Q96KN7 1286 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 RILPQ96NA2 401 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 CCPG1Q9ULG6 757 aa20.18■□□□□ 0.82
HCG11-201ENST00000411553 HSPD1P10809 573 aaKnown RBP20.17■□□□□ 0.82
HCG11-201ENST00000411553 ZNF445P59923 1031 aa20.17■□□□□ 0.82
HCG11-201ENST00000411553 ARMCX5Q6P1M9 558 aa20.17■□□□□ 0.82
HCG11-201ENST00000411553 KIAA1468Q9P260 1216 aa20.17■□□□□ 0.82
HCG11-201ENST00000411553 ABCB5Q2M3G0 1257 aa20.17■□□□□ 0.82
HCG11-201ENST00000411553 SSH3Q8TE77 659 aa20.17■□□□□ 0.82
HCG11-201ENST00000411553 DDX41Q9UJV9 622 aaKnown RBP20.17■□□□□ 0.82
HCG11-201ENST00000411553 ITKQ08881 620 aa20.17■□□□□ 0.82
HCG11-201ENST00000411553 POLA2Q14181 598 aa20.17■□□□□ 0.82
HCG11-201ENST00000411553 PLCB4Q15147 1175 aa20.17■□□□□ 0.82
HCG11-201ENST00000411553 EP400NLQ6ZTU2 488 aa20.17■□□□□ 0.82
HCG11-201ENST00000411553 PFKFB2O60825 505 aa20.17■□□□□ 0.82
HCG11-201ENST00000411553 INPP5BP32019 993 aa20.17■□□□□ 0.82
HCG11-201ENST00000411553 SESTD1Q86VW0 696 aa20.17■□□□□ 0.82
HCG11-201ENST00000411553 POTEDQ86YR6 584 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms