RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 DGKHQ86XP1 1220 aa16.36■□□□□ 0.21
MINDY4-202ENST00000409881 ZKSCAN4Q969J2 545 aaPredicted RBP16.36■□□□□ 0.21
MINDY4-202ENST00000409881 KLRG1Q96E93 195 aa16.36■□□□□ 0.21
MINDY4-202ENST00000409881 ERO1AQ96HE7 468 aa16.36■□□□□ 0.21
MINDY4-202ENST00000409881 MYL10Q9BUA6 226 aa16.36■□□□□ 0.21
MINDY4-202ENST00000409881 ZNF446Q9NWS9 450 aa16.36■□□□□ 0.21
MINDY4-202ENST00000409881 SLC12A7Q9Y666 1083 aa16.36■□□□□ 0.21
MINDY4-202ENST00000409881 GOLGA8BA8MQT2 603 aa16.36■□□□□ 0.21
MINDY4-202ENST00000409881 FILIP1Q7Z7B0 1213 aa16.36■□□□□ 0.21
MINDY4-202ENST00000409881 SGMS1Q86VZ5 419 aa16.36■□□□□ 0.21
MINDY4-202ENST00000409881 TMTC2Q8N394 836 aa16.36■□□□□ 0.21
MINDY4-202ENST00000409881 PGBD1Q96JS3 809 aa16.36■□□□□ 0.21
MINDY4-202ENST00000409881 SCAND2PQ9GZW5 306 aaPredicted RBP16.36■□□□□ 0.21
MINDY4-202ENST00000409881 KAT14Q9H8E8 782 aa16.36■□□□□ 0.21
MINDY4-202ENST00000409881 KANSL2Q9H9L4 492 aa16.36■□□□□ 0.21
MINDY4-202ENST00000409881 ZNF112Q9UJU3 913 aa16.36■□□□□ 0.21
MINDY4-202ENST00000409881 GOLGA6L19H0YKK7 550 aa16.35■□□□□ 0.21
MINDY4-202ENST00000409881 TTLL1O95922 423 aa16.35■□□□□ 0.21
MINDY4-202ENST00000409881 ASNSP08243 561 aa16.35■□□□□ 0.21
MINDY4-202ENST00000409881 CDC25BP30305 580 aa16.35■□□□□ 0.21
MINDY4-202ENST00000409881 MOB2Q70IA6 237 aa16.35■□□□□ 0.21
MINDY4-202ENST00000409881 CCDC84Q86UT8 332 aaPredicted RBP16.35■□□□□ 0.21
MINDY4-202ENST00000409881 MICU3Q86XE3 530 aa16.35■□□□□ 0.21
MINDY4-202ENST00000409881 TMEM47Q9BQJ4 181 aa16.35■□□□□ 0.21
MINDY4-202ENST00000409881 MTMR7Q9Y216 660 aa16.35■□□□□ 0.21
MINDY4-202ENST00000409881 GREB1LQ9C091 1923 aaPredicted RBP16.35■□□□□ 0.21
MINDY4-202ENST00000409881 KIF3CO14782 793 aa16.35■□□□□ 0.21
MINDY4-202ENST00000409881 EEF2P13639 858 aaKnown RBP16.35■□□□□ 0.21
MINDY4-202ENST00000409881 RXRAP19793 462 aa16.35■□□□□ 0.21
MINDY4-202ENST00000409881 IREB2P48200 963 aaKnown RBP16.35■□□□□ 0.21
MINDY4-202ENST00000409881 APOA5Q6Q788 366 aa16.35■□□□□ 0.21
MINDY4-202ENST00000409881 SYNE3Q6ZMZ3 975 aa16.35■□□□□ 0.21
MINDY4-202ENST00000409881 LRRC47Q8N1G4 583 aaKnown RBP16.35■□□□□ 0.21
MINDY4-202ENST00000409881 CHMP4CQ96CF2 233 aa16.35■□□□□ 0.21
MINDY4-202ENST00000409881 TRERF1Q96PN7 1200 aa16.35■□□□□ 0.21
MINDY4-202ENST00000409881 SLU7O95391 586 aaKnown RBP16.34■□□□□ 0.21
MINDY4-202ENST00000409881 C11orf57Q6ZUT1 292 aaPredicted RBP16.34■□□□□ 0.21
MINDY4-202ENST00000409881 CATIPQ7Z7H3 387 aa16.34■□□□□ 0.21
MINDY4-202ENST00000409881 SCYL3Q8IZE3 742 aa16.34■□□□□ 0.21
MINDY4-202ENST00000409881 ZNF654Q8IZM8 581 aa16.34■□□□□ 0.21
MINDY4-202ENST00000409881 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.34■□□□□ 0.21
MINDY4-202ENST00000409881 NUP133Q8WUM0 1156 aa16.34■□□□□ 0.21
MINDY4-202ENST00000409881 ANKS1AQ92625 1134 aa16.34■□□□□ 0.21
MINDY4-202ENST00000409881 PICK1Q9NRD5 415 aa16.34■□□□□ 0.21
MINDY4-202ENST00000409881 ZBTB43O43298 467 aa16.34■□□□□ 0.21
MINDY4-202ENST00000409881 TOP1P11387 765 aaKnown RBP16.34■□□□□ 0.21
MINDY4-202ENST00000409881 PDIA3P30101 505 aaKnown RBP16.34■□□□□ 0.21
MINDY4-202ENST00000409881 IQCB1Q15051 598 aa16.34■□□□□ 0.21
MINDY4-202ENST00000409881 PNMA1Q8ND90 353 aa16.34■□□□□ 0.21
MINDY4-202ENST00000409881 CALCOCO1Q9P1Z2 691 aa16.34■□□□□ 0.21
MINDY4-202ENST00000409881 A0A087WWV3 80 aa16.33■□□□□ 0.2
MINDY4-202ENST00000409881 PDCP20941 246 aa16.33■□□□□ 0.2
MINDY4-202ENST00000409881 EVCP57679 992 aa16.33■□□□□ 0.2
MINDY4-202ENST00000409881 CCT2P78371 535 aaKnown RBP16.33■□□□□ 0.2
MINDY4-202ENST00000409881 MAP3K9P80192 1104 aa16.33■□□□□ 0.2
MINDY4-202ENST00000409881 CCZ1BP86790 482 aa16.33■□□□□ 0.2
MINDY4-202ENST00000409881 CCZ1P86791 482 aaPredicted RBP16.33■□□□□ 0.2
MINDY4-202ENST00000409881 GTF3C6Q969F1 213 aa16.33■□□□□ 0.2
MINDY4-202ENST00000409881 ZNF274Q96GC6 653 aaPredicted RBP16.33■□□□□ 0.2
MINDY4-202ENST00000409881 CELF2O95319 508 aaKnown RBP16.33■□□□□ 0.2
MINDY4-202ENST00000409881 NOVP48745 357 aa16.33■□□□□ 0.2
MINDY4-202ENST00000409881 ARMC9Q7Z3E5 817 aa16.33■□□□□ 0.2
MINDY4-202ENST00000409881 NYAP2Q9P242 653 aa16.33■□□□□ 0.2
MINDY4-202ENST00000409881 ATAD5Q96QE3 1844 aa16.33■□□□□ 0.2
MINDY4-202ENST00000409881 RAD21O60216 631 aa16.32■□□□□ 0.2
MINDY4-202ENST00000409881 ITGBL1O95965 494 aaPredicted RBP16.32■□□□□ 0.2
MINDY4-202ENST00000409881 CAPN2P17655 700 aa16.32■□□□□ 0.2
MINDY4-202ENST00000409881 VGLL4Q14135 290 aa16.32■□□□□ 0.2
MINDY4-202ENST00000409881 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.32■□□□□ 0.2
MINDY4-202ENST00000409881 SIAH1Q8IUQ4 282 aa16.32■□□□□ 0.2
MINDY4-202ENST00000409881 CCAR2Q8N163 923 aaKnown RBP16.32■□□□□ 0.2
MINDY4-202ENST00000409881 NCOA5Q9HCD5 579 aaKnown RBP16.32■□□□□ 0.2
MINDY4-202ENST00000409881 HPS5Q9UPZ3 1129 aa16.32■□□□□ 0.2
MINDY4-202ENST00000409881 CSADQ9Y600 493 aa16.32■□□□□ 0.2
MINDY4-202ENST00000409881 DOCK1Q14185 1865 aa16.32■□□□□ 0.2
MINDY4-202ENST00000409881 GOLGA8AA7E2F4 631 aa16.31■□□□□ 0.2
MINDY4-202ENST00000409881 NEMFO60524 1076 aa16.31■□□□□ 0.2
MINDY4-202ENST00000409881 METAP2P50579 478 aaKnown RBP eCLIP16.31■□□□□ 0.2
MINDY4-202ENST00000409881 ERCC6LQ2NKX8 1250 aa16.31■□□□□ 0.2
MINDY4-202ENST00000409881 ACER1Q8TDN7 264 aa16.31■□□□□ 0.2
MINDY4-202ENST00000409881 MRFAP1L1Q96HT8 127 aa16.31■□□□□ 0.2
MINDY4-202ENST00000409881 ARHGEF10LQ9HCE6 1279 aa16.31■□□□□ 0.2
MINDY4-202ENST00000409881 GINM1Q9NU53 330 aa16.31■□□□□ 0.2
MINDY4-202ENST00000409881 UBE2Q2LH0YL09 131 aa16.31■□□□□ 0.2
MINDY4-202ENST00000409881 PFKFB2O60825 505 aa16.31■□□□□ 0.2
MINDY4-202ENST00000409881 NOL9Q5SY16 702 aaKnown RBP16.31■□□□□ 0.2
MINDY4-202ENST00000409881 SARM1Q6SZW1 724 aa16.31■□□□□ 0.2
MINDY4-202ENST00000409881 PLCD3Q8N3E9 789 aa16.31■□□□□ 0.2
MINDY4-202ENST00000409881 LRRN4CLQ8ND94 238 aa16.31■□□□□ 0.2
MINDY4-202ENST00000409881 USP17L5A8MUK1 530 aa16.3■□□□□ 0.2
MINDY4-202ENST00000409881 DDAH1O94760 285 aa16.3■□□□□ 0.2
MINDY4-202ENST00000409881 ECE1P42892 770 aa16.3■□□□□ 0.2
MINDY4-202ENST00000409881 SCRN1Q12765 414 aa16.3■□□□□ 0.2
MINDY4-202ENST00000409881 RASGRP2Q7LDG7 609 aa16.3■□□□□ 0.2
MINDY4-202ENST00000409881 ZNF784Q8NCA9 323 aaPredicted RBP16.3■□□□□ 0.2
MINDY4-202ENST00000409881 IPO4Q8TEX9 1081 aaKnown RBP16.3■□□□□ 0.2
MINDY4-202ENST00000409881 SNCAIPQ9Y6H5 919 aa16.3■□□□□ 0.2
MINDY4-202ENST00000409881 A0A1W2PRG0 241 aa16.3■□□□□ 0.2
MINDY4-202ENST00000409881 PTPRAP18433 802 aa16.3■□□□□ 0.2
MINDY4-202ENST00000409881 CEBPZQ03701 1054 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms