RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 ZNF157P51786 506 aaPredicted RBP14.57□□□□□ -0.08
PMS1-204ENST00000409823 HEATR3Q7Z4Q2 680 aa14.57□□□□□ -0.08
PMS1-204ENST00000409823 LPAR1Q92633 364 aa14.57□□□□□ -0.08
PMS1-204ENST00000409823 RNF26Q9BY78 433 aaPredicted RBP14.57□□□□□ -0.08
PMS1-204ENST00000409823 FERMT3Q86UX7 667 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 RBM46Q8TBY0 533 aaKnown RBP14.56□□□□□ -0.08
PMS1-204ENST00000409823 PRR12Q9ULL5 1215 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 SYNPO2Q9UMS6 1093 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 KCNJ14Q9UNX9 436 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 PAPPA2Q9BXP8 1791 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 C19orf81C9J6K1 198 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 PRPF3O43395 683 aaKnown RBP14.56□□□□□ -0.08
PMS1-204ENST00000409823 DEXIO95424 95 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 PPIL2Q13356 520 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 SHISA4Q96DD7 197 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 RRP36Q96EU6 259 aaKnown RBP14.56□□□□□ -0.08
PMS1-204ENST00000409823 WNK4Q96J92 1243 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 LZTS2Q9BRK4 669 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 SPZ1Q9BXG8 430 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 RIOX1Q9H6W3 641 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 H3BQV1 296 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 WDR46O15213 610 aaKnown RBP14.56□□□□□ -0.08
PMS1-204ENST00000409823 STX6O43752 255 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 IFFO2Q5TF58 517 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 SYDE2Q5VT97 1194 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 PAXIP1Q6ZW49 1069 aaPredicted RBP14.56□□□□□ -0.08
PMS1-204ENST00000409823 C8orf76Q96K31 380 aa14.56□□□□□ -0.08
PMS1-204ENST00000409823 SEC63Q9UGP8 760 aaKnown RBP14.56□□□□□ -0.08
PMS1-204ENST00000409823 PHIPQ8WWQ0 1821 aa14.55□□□□□ -0.08
PMS1-204ENST00000409823 PEX10O60683 326 aa14.55□□□□□ -0.08
PMS1-204ENST00000409823 CCDC174Q6PII3 467 aa14.55□□□□□ -0.08
PMS1-204ENST00000409823 COA7Q96BR5 231 aa14.55□□□□□ -0.08
PMS1-204ENST00000409823 CHAMP1Q96JM3 812 aa14.55□□□□□ -0.08
PMS1-204ENST00000409823 A0A0G2JLL6 359 aaPredicted RBP14.55□□□□□ -0.08
PMS1-204ENST00000409823 PPP1R11O60927 126 aaPredicted RBP14.55□□□□□ -0.08
PMS1-204ENST00000409823 SCG2P13521 617 aa14.55□□□□□ -0.08
PMS1-204ENST00000409823 CDC37Q16543 378 aaPredicted RBP14.55□□□□□ -0.08
PMS1-204ENST00000409823 USH1GQ495M9 461 aa14.55□□□□□ -0.08
PMS1-204ENST00000409823 MCTP1Q6DN14 999 aa14.55□□□□□ -0.08
PMS1-204ENST00000409823 TYW1BQ6NUM6 668 aa14.55□□□□□ -0.08
PMS1-204ENST00000409823 PRRT2Q7Z6L0 340 aaPredicted RBP14.55□□□□□ -0.08
PMS1-204ENST00000409823 ZDHHC9Q9Y397 364 aa14.55□□□□□ -0.08
PMS1-204ENST00000409823 PFKFB3Q16875 520 aaPredicted RBP14.54□□□□□ -0.08
PMS1-204ENST00000409823 WWC2Q6AWC2 1192 aa14.54□□□□□ -0.08
PMS1-204ENST00000409823 TMEM88BA6NKF7 163 aa14.54□□□□□ -0.08
PMS1-204ENST00000409823 QRICH1Q2TAL8 776 aa14.54□□□□□ -0.08
PMS1-204ENST00000409823 SLF1Q9BQI6 1058 aa14.54□□□□□ -0.08
PMS1-204ENST00000409823 FEM1BQ9UK73 627 aa14.54□□□□□ -0.08
PMS1-204ENST00000409823 KCNH4Q9UQ05 1017 aa14.54□□□□□ -0.08
PMS1-204ENST00000409823 STK36Q9NRP7 1315 aa14.54□□□□□ -0.08
PMS1-204ENST00000409823 CXCL11O14625 94 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 ADAMTS3O15072 1205 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 HTRA3P83110 453 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 SNAPC2Q13487 334 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 SPRYD7Q5W111 196 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 CPXCR1Q8N123 301 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 CHURC1Q8WUH1 139 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 MTMR6Q9Y217 621 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 KIF3AQ9Y496 699 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 ZBTB5O15062 677 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 PDCP20941 246 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 SH3D19Q5HYK7 790 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 KRT40Q6A162 431 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 FBXO18Q8NFZ0 1043 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 ATG4CQ96DT6 458 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 C12orf42Q96LP6 360 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 CHMP5Q9NZZ3 219 aa14.53□□□□□ -0.08
PMS1-204ENST00000409823 MOGSQ13724 837 aa14.52□□□□□ -0.08
PMS1-204ENST00000409823 TRIM29Q14134 588 aa14.52□□□□□ -0.08
PMS1-204ENST00000409823 RGMBQ6NW40 437 aa14.52□□□□□ -0.08
PMS1-204ENST00000409823 BTNL9Q6UXG8 535 aa14.52□□□□□ -0.08
PMS1-204ENST00000409823 PRPF38AQ8NAV1 312 aaKnown RBP14.52□□□□□ -0.08
PMS1-204ENST00000409823 MS4A4AQ96JQ5 239 aa14.52□□□□□ -0.08
PMS1-204ENST00000409823 CCL15-CCL14A0A0B4J2E2 113 aa14.52□□□□□ -0.09
PMS1-204ENST00000409823 PNMA6FA0A0J9YX94 578 aa14.52□□□□□ -0.09
PMS1-204ENST00000409823 CCL15Q16663 113 aa14.52□□□□□ -0.09
PMS1-204ENST00000409823 FAM173BQ6P4H8 233 aa14.52□□□□□ -0.09
PMS1-204ENST00000409823 CATSPERGQ6ZRH7 1159 aa14.52□□□□□ -0.09
PMS1-204ENST00000409823 WASF1Q92558 559 aa14.52□□□□□ -0.09
PMS1-204ENST00000409823 TLL2Q9Y6L7 1015 aa14.52□□□□□ -0.09
PMS1-204ENST00000409823 NAPAP54920 295 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 RASAL3Q86YV0 1011 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 PPP1R9AQ9ULJ8 1098 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 TRPM7Q96QT4 1865 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 USP17L15C9J2P7 530 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 USP17L13C9JLJ4 530 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 USP17L11C9JVI0 530 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 USP17L18D6R9N7 530 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 USP17L22D6RA61 530 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 USP17L17D6RBQ6 530 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 USP17L19D6RCP7 530 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 USP17L20D6RJB6 530 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 SMARCA1P28370 1054 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 USP17L24Q0WX57 530 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 FSTL1Q12841 308 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 CYP4F22Q6NT55 531 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 OXER1Q8TDS5 423 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 BRI3BPQ8WY22 251 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 AGBL1Q96MI9 1066 aa14.51□□□□□ -0.09
PMS1-204ENST00000409823 RAVER2Q9HCJ3 691 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms