RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 ANKRD20A12PQ8NF67 263 aa17.1■□□□□ 0.33
LYSMD4-204ENST00000409796 GPKOWQ92917 476 aaPredicted RBP eCLIP17.1■□□□□ 0.33
LYSMD4-204ENST00000409796 PNKPQ96T60 521 aa17.1■□□□□ 0.33
LYSMD4-204ENST00000409796 SLF1Q9BQI6 1058 aa17.1■□□□□ 0.33
LYSMD4-204ENST00000409796 RMND1Q9NWS8 449 aa17.1■□□□□ 0.33
LYSMD4-204ENST00000409796 LONP1P36776 959 aaKnown RBP17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 TUBB2AQ13885 445 aa17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 SLC4A8Q2Y0W8 1093 aa17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 ARL6IP4Q66PJ3 421 aaKnown RBP17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 BLIDQ8IZY5 108 aa17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 MARCH10Q8NA82 808 aaPredicted RBP17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 RASGRP4Q8TDF6 673 aa17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 NAPGQ99747 312 aaPredicted RBP17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 TUBB2BQ9BVA1 445 aa17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 FEZ2Q9UHY8 353 aaPredicted RBP17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 PRDX5P30044 214 aa17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 STAT6P42226 847 aa17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 TRIM14Q14142 442 aa17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 IRF2BP1Q8IU81 584 aa17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 MSANTD4Q8NCY6 345 aa17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 ATP8A2Q9NTI2 1148 aa17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 TFCP2L1Q9NZI6 479 aa17.09■□□□□ 0.33
LYSMD4-204ENST00000409796 TRIM49BA6NDI0 452 aa17.08■□□□□ 0.33
LYSMD4-204ENST00000409796 MAP2K7O14733 419 aa17.08■□□□□ 0.33
LYSMD4-204ENST00000409796 UBXN1Q04323 297 aa17.08■□□□□ 0.33
LYSMD4-204ENST00000409796 CHP1Q99653 195 aa17.08■□□□□ 0.33
LYSMD4-204ENST00000409796 RAB21Q9UL25 225 aa17.08■□□□□ 0.33
LYSMD4-204ENST00000409796 ADAMTS2O95450 1211 aa17.08■□□□□ 0.32
LYSMD4-204ENST00000409796 PARP1P09874 1014 aaKnown RBP17.08■□□□□ 0.32
LYSMD4-204ENST00000409796 CALML3P27482 149 aa17.08■□□□□ 0.32
LYSMD4-204ENST00000409796 BICDL1Q6ZP65 573 aa17.08■□□□□ 0.32
LYSMD4-204ENST00000409796 NEK11Q8NG66 645 aa17.08■□□□□ 0.32
LYSMD4-204ENST00000409796 ARPP21Q9UBL0 812 aaPredicted RBP17.08■□□□□ 0.32
LYSMD4-204ENST00000409796 CCDC88AQ3V6T2 1871 aa17.08■□□□□ 0.32
LYSMD4-204ENST00000409796 H3BQF6 201 aa17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 KIF5BP33176 963 aa17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 RAD51AP2Q09MP3 1159 aa17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 SBK1Q52WX2 424 aa17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 BEND6Q5SZJ8 279 aaPredicted RBP17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 WWC2Q6AWC2 1192 aa17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 CLEC4GQ6UXB4 293 aa17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 ADSSL1Q8N142 457 aa17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 DISC1Q9NRI5 854 aa17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 PP2D1A8MPX8 630 aa17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 POTEB2H3BUK9 544 aa17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 H7C1D1 291 aa17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 NAALADL2Q58DX5 795 aa17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 POTEAQ6S8J7 498 aa17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 STAG2Q8N3U4 1231 aa17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 HNRNPLLQ8WVV9 542 aaKnown RBP17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 PCDHA4Q9UN74 947 aa17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 REXO2Q9Y3B8 237 aaKnown RBP17.07■□□□□ 0.32
LYSMD4-204ENST00000409796 USP17L8P0C7I0 530 aa17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 USP5P45974 858 aa17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 PMS1P54277 932 aaKnown RBP17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 TYW1BQ6NUM6 668 aa17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 KAT14Q9H8E8 782 aa17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 JAG2Q9Y219 1238 aa17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 RHOXF2BP0C7M4 288 aa17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 HIBADHP31937 336 aaKnown RBP17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 GYS2P54840 703 aa17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 WHAMMP3Q1A5X7 153 aa17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 RHOXF2Q9BQY4 288 aa17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 CDCA7Q9BWT1 371 aaPredicted RBP17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 TMEM60Q9H2L4 133 aa17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 MCM9Q9NXL9 1143 aa17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 MYO1AQ9UBC5 1043 aa17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 TRIM10Q9UDY6 481 aa17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 COL5A3P25940 1745 aaPredicted RBP17.06■□□□□ 0.32
LYSMD4-204ENST00000409796 TTC26A0AVF1 554 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 TFAP4Q01664 338 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 MB21D1Q8N884 522 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 TSPYL1Q9H0U9 437 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 IL17RBQ9NRM6 502 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 EPN1Q9Y6I3 576 aaPredicted RBP17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 SPATA31A1Q5TZJ5 1347 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 MAST2Q6P0Q8 1798 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 CTAGE15A4D2H0 777 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 NDUFA10O95299 355 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 CTAGE8P0CG41 777 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 SMIM5Q71RC9 77 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 CTAGE6Q86UF2 777 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 CTAGE4Q8IX94 777 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 PNMA1Q8ND90 353 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 PLIN2Q99541 437 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 ABCB6Q9NP58 842 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 SH3GLB2Q9NR46 395 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 MYH1P12882 1939 aa17.05■□□□□ 0.32
LYSMD4-204ENST00000409796 LGALS16A8MUM7 142 aa17.04■□□□□ 0.32
LYSMD4-204ENST00000409796 M0R2N6 131 aa17.04■□□□□ 0.32
LYSMD4-204ENST00000409796 KLRC4O43908 158 aa17.04■□□□□ 0.32
LYSMD4-204ENST00000409796 AMPD2Q01433 879 aa17.04■□□□□ 0.32
LYSMD4-204ENST00000409796 MCM6Q14566 821 aa17.04■□□□□ 0.32
LYSMD4-204ENST00000409796 DTHD1Q6ZMT9 781 aa17.04■□□□□ 0.32
LYSMD4-204ENST00000409796 RASSF8Q8NHQ8 419 aa17.04■□□□□ 0.32
LYSMD4-204ENST00000409796 PDS5AQ29RF7 1337 aaKnown RBP17.04■□□□□ 0.32
LYSMD4-204ENST00000409796 CCDC194A0A1B0GVG4 234 aa17.04■□□□□ 0.32
LYSMD4-204ENST00000409796 KCNQ2O43526 872 aa17.04■□□□□ 0.32
LYSMD4-204ENST00000409796 RPS8P62241 208 aaKnown RBP17.04■□□□□ 0.32
LYSMD4-204ENST00000409796 VSNL1P62760 191 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms