RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 PCDHA7Q9UN72 937 aa16.15■□□□□ 0.18
GPNMB-203ENST00000409458 TMX2Q9Y320 296 aa16.15■□□□□ 0.18
GPNMB-203ENST00000409458 SSC5DA1L4H1 1573 aa16.15■□□□□ 0.18
GPNMB-203ENST00000409458 USP17L10C9JJH3 530 aa16.14■□□□□ 0.18
GPNMB-203ENST00000409458 NAPAP54920 295 aa16.14■□□□□ 0.18
GPNMB-203ENST00000409458 SLC39A14Q15043 492 aa16.14■□□□□ 0.18
GPNMB-203ENST00000409458 GPR162Q16538 588 aa16.14■□□□□ 0.18
GPNMB-203ENST00000409458 KIAA1755Q5JYT7 1200 aa16.14■□□□□ 0.18
GPNMB-203ENST00000409458 PRAMEF18Q5VWM3 479 aa16.14■□□□□ 0.18
GPNMB-203ENST00000409458 FAM177A1Q8N128 213 aaPredicted RBP16.14■□□□□ 0.18
GPNMB-203ENST00000409458 MTMR8Q96EF0 704 aa16.14■□□□□ 0.18
GPNMB-203ENST00000409458 GLIS2Q9BZE0 524 aaPredicted RBP16.14■□□□□ 0.18
GPNMB-203ENST00000409458 ADARB2Q9NS39 739 aaKnown RBP16.14■□□□□ 0.18
GPNMB-203ENST00000409458 POLR2AP24928 1970 aaKnown RBP16.14■□□□□ 0.17
GPNMB-203ENST00000409458 hCG_1984214I3L0E3 225 aa16.14■□□□□ 0.17
GPNMB-203ENST00000409458 M0R2N6 131 aa16.14■□□□□ 0.17
GPNMB-203ENST00000409458 PPP1R11O60927 126 aaPredicted RBP16.14■□□□□ 0.17
GPNMB-203ENST00000409458 ASNSP08243 561 aa16.14■□□□□ 0.17
GPNMB-203ENST00000409458 ZNF445P59923 1031 aa16.14■□□□□ 0.17
GPNMB-203ENST00000409458 CCDC183Q5T5S1 534 aa16.14■□□□□ 0.17
GPNMB-203ENST00000409458 SPICE1Q8N0Z3 855 aa16.14■□□□□ 0.17
GPNMB-203ENST00000409458 ZNF713Q8N859 430 aaPredicted RBP16.14■□□□□ 0.17
GPNMB-203ENST00000409458 RASGRP4Q8TDF6 673 aa16.14■□□□□ 0.17
GPNMB-203ENST00000409458 GOLPH3LQ9H4A5 285 aa16.14■□□□□ 0.17
GPNMB-203ENST00000409458 PCDHB6Q9Y5E3 794 aa16.14■□□□□ 0.17
GPNMB-203ENST00000409458 PNMA6FA0A0J9YX94 578 aa16.13■□□□□ 0.17
GPNMB-203ENST00000409458 SYCE3A1L190 88 aa16.13■□□□□ 0.17
GPNMB-203ENST00000409458 WNT7AO00755 349 aa16.13■□□□□ 0.17
GPNMB-203ENST00000409458 BMP3P12645 472 aa16.13■□□□□ 0.17
GPNMB-203ENST00000409458 MARCKSP29966 332 aaPredicted RBP16.13■□□□□ 0.17
GPNMB-203ENST00000409458 GALNT17Q6IS24 598 aa16.13■□□□□ 0.17
GPNMB-203ENST00000409458 PIK3AP1Q6ZUJ8 805 aa16.13■□□□□ 0.17
GPNMB-203ENST00000409458 CCAR1Q8IX12 1150 aaKnown RBP16.13■□□□□ 0.17
GPNMB-203ENST00000409458 CCDC12Q8WUD4 166 aaPredicted RBP16.13■□□□□ 0.17
GPNMB-203ENST00000409458 ZMYND12Q9H0C1 365 aa16.13■□□□□ 0.17
GPNMB-203ENST00000409458 GOPCQ9HD26 462 aa16.13■□□□□ 0.17
GPNMB-203ENST00000409458 PPP2R3BQ9Y5P8 575 aa16.13■□□□□ 0.17
GPNMB-203ENST00000409458 ZBTB5O15062 677 aa16.12■□□□□ 0.17
GPNMB-203ENST00000409458 ATP2B1P20020 1258 aa16.12■□□□□ 0.17
GPNMB-203ENST00000409458 DCAF15Q66K64 600 aa16.12■□□□□ 0.17
GPNMB-203ENST00000409458 COA7Q96BR5 231 aa16.12■□□□□ 0.17
GPNMB-203ENST00000409458 ZNF341Q9BYN7 854 aa16.12■□□□□ 0.17
GPNMB-203ENST00000409458 PCDHA6Q9UN73 950 aa16.12■□□□□ 0.17
GPNMB-203ENST00000409458 PCDHA8Q9Y5H6 950 aa16.12■□□□□ 0.17
GPNMB-203ENST00000409458 PITPNM2Q9BZ72 1349 aa16.12■□□□□ 0.17
GPNMB-203ENST00000409458 SMCO2A6NFE2 343 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 TMEM232C9JQI7 657 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 PPP6R2O75170 966 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 NR1I2O75469 434 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 INPP5BP32019 993 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 ZYXQ15942 572 aaKnown RBP16.11■□□□□ 0.17
GPNMB-203ENST00000409458 CDC37Q16543 378 aaPredicted RBP16.11■□□□□ 0.17
GPNMB-203ENST00000409458 AXDND1Q5T1B0 1012 aaPredicted RBP16.11■□□□□ 0.17
GPNMB-203ENST00000409458 ADALQ6DHV7 355 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 GAS2L3Q86XJ1 694 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 L3MBTL3Q96JM7 780 aaPredicted RBP16.11■□□□□ 0.17
GPNMB-203ENST00000409458 VCPKMTQ9H867 229 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 NOL7Q9UMY1 257 aaKnown RBP16.11■□□□□ 0.17
GPNMB-203ENST00000409458 FZD1Q9UP38 647 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 A0A1W2PQ27 194 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 A0A1W2PQ64 194 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 A0A1W2PQD8 194 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 ESYT2A0FGR8 921 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 CTNND1O60716 968 aaKnown RBP16.11■□□□□ 0.17
GPNMB-203ENST00000409458 QRICH1Q2TAL8 776 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 FAM83BQ5T0W9 1011 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 SYDE2Q5VT97 1194 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 PPP1R18Q6NYC8 613 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 FSIP1Q8NA03 581 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 SH2D4AQ9H788 454 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 C6orf50Q9HD87 102 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.11■□□□□ 0.17
GPNMB-203ENST00000409458 DACT1Q9NYF0 836 aa16.11■□□□□ 0.17
GPNMB-203ENST00000409458 FSD2A1L4K1 749 aa16.1■□□□□ 0.17
GPNMB-203ENST00000409458 TRIM75PA6NK02 468 aa16.1■□□□□ 0.17
GPNMB-203ENST00000409458 IKQ13123 557 aaPredicted RBP16.1■□□□□ 0.17
GPNMB-203ENST00000409458 TTC38Q5R3I4 469 aa16.1■□□□□ 0.17
GPNMB-203ENST00000409458 BTNL9Q6UXG8 535 aa16.1■□□□□ 0.17
GPNMB-203ENST00000409458 JMYQ8N9B5 988 aa16.1■□□□□ 0.17
GPNMB-203ENST00000409458 MRPS27Q92552 414 aaKnown RBP16.1■□□□□ 0.17
GPNMB-203ENST00000409458 HOOK2Q96ED9 719 aa16.1■□□□□ 0.17
GPNMB-203ENST00000409458 GINM1Q9NU53 330 aa16.1■□□□□ 0.17
GPNMB-203ENST00000409458 ZNF112Q9UJU3 913 aa16.1■□□□□ 0.17
GPNMB-203ENST00000409458 GNA11P29992 359 aa16.09■□□□□ 0.17
GPNMB-203ENST00000409458 DEKP35659 375 aaKnown RBP16.09■□□□□ 0.17
GPNMB-203ENST00000409458 TRAPPC10P48553 1259 aa16.09■□□□□ 0.17
GPNMB-203ENST00000409458 SNAP25P60880 206 aa16.09■□□□□ 0.17
GPNMB-203ENST00000409458 DPY19L2Q6NUT2 758 aa16.09■□□□□ 0.17
GPNMB-203ENST00000409458 CCDC73Q6ZRK6 1079 aa16.09■□□□□ 0.17
GPNMB-203ENST00000409458 WRNIP1Q96S55 665 aa16.09■□□□□ 0.17
GPNMB-203ENST00000409458 FEZ1Q99689 392 aa16.09■□□□□ 0.17
GPNMB-203ENST00000409458 DDX19AQ9NUU7 478 aaKnown RBP16.09■□□□□ 0.17
GPNMB-203ENST00000409458 CEP131Q9UPN4 1083 aa16.09■□□□□ 0.17
GPNMB-203ENST00000409458 PAPPA2Q9BXP8 1791 aa16.09■□□□□ 0.17
GPNMB-203ENST00000409458 PHIPQ8WWQ0 1821 aa16.09■□□□□ 0.17
GPNMB-203ENST00000409458 ZC3H4Q9UPT8 1303 aaKnown RBP16.09■□□□□ 0.17
GPNMB-203ENST00000409458 CCDC194A0A1B0GVG4 234 aa16.08■□□□□ 0.17
GPNMB-203ENST00000409458 A0A1B0GVL5 298 aa16.08■□□□□ 0.17
GPNMB-203ENST00000409458 ADM5C9JUS6 153 aa16.08■□□□□ 0.17
GPNMB-203ENST00000409458 GRIN3BO60391 1043 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms