RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 LMNTD2Q8IXW0 634 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 ANKRD13CQ8N6S4 541 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 NLGN2Q8NFZ4 835 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 NSRP1Q9H0G5 558 aaKnown RBP8.14□□□□□ -1.11
SCN9A-202ENST00000409435 SUPT20HL2P0C7V6 817 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 POLGP54098 1239 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-202ENST00000409435 POLA2Q14181 598 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 INF2Q27J81 1249 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 NBPF20Q3BBV1 942 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 CDCA5Q96FF9 252 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 HERC5Q9UII4 1024 aaKnown RBP8.14□□□□□ -1.11
SCN9A-202ENST00000409435 GPAA1O43292 621 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 TRIM27P14373 513 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 CASQ1P31415 396 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 KRT2P35908 639 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 PSMD2Q13200 908 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 G2E3Q7L622 706 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 MB21D1Q8N884 522 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 INO80BQ9C086 356 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-202ENST00000409435 UBE2OQ9C0C9 1292 aaKnown RBP8.14□□□□□ -1.11
SCN9A-202ENST00000409435 SLC25A27O95847 323 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 ZNF853P0CG23 659 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 FDX1P10109 184 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 P4HA1P13674 534 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 STAT3P40763 770 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 BIRC3Q13489 604 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 TESK2Q96S53 571 aa8.14□□□□□ -1.11
SCN9A-202ENST00000409435 CPDO75976 1380 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 KRT19P08727 400 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 PPARAQ07869 468 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 PKN2Q16513 984 aaKnown RBP8.13□□□□□ -1.11
SCN9A-202ENST00000409435 FKBP15Q5T1M5 1219 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 EDC3Q96F86 508 aaKnown RBP8.13□□□□□ -1.11
SCN9A-202ENST00000409435 CAMKK2Q96RR4 588 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 CCDC94Q9BW85 323 aaPredicted RBP8.13□□□□□ -1.11
SCN9A-202ENST00000409435 DIXDC1Q155Q3 683 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 GBP7Q8N8V2 638 aaPredicted RBP8.13□□□□□ -1.11
SCN9A-202ENST00000409435 RPAP3Q9H6T3 665 aaPredicted RBP8.13□□□□□ -1.11
SCN9A-202ENST00000409435 SLC8A2Q9UPR5 921 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 ADCY3O60266 1144 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 GUCY1B3Q02153 619 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 MTMR2Q13614 643 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 GPATCH4Q5T3I0 446 aaKnown RBP8.13□□□□□ -1.11
SCN9A-202ENST00000409435 SYDE2Q5VT97 1194 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 TMEM199Q8N511 208 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 TSPYL6Q8N831 410 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 SOCS4Q8WXH5 440 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 RIOK1Q9BRS2 568 aaKnown RBP8.13□□□□□ -1.11
SCN9A-202ENST00000409435 AMNQ9BXJ7 453 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 VGLL3A8MV65 326 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 TBC1D8O95759 1140 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 GNASQ5JWF2 1037 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 KLHL10Q6JEL2 608 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 ZC3H15Q8WU90 426 aaKnown RBP8.13□□□□□ -1.11
SCN9A-202ENST00000409435 TEKT3Q9BXF9 490 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 EXOC1Q9NV70 894 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 NBPF26B4DH59 902 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 ADM5C9JUS6 153 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 CTNNA2P26232 953 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 MAP2K2P36507 400 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 LBX1P52954 281 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 LETM2Q2VYF4 491 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 FRMPD1Q5SYB0 1578 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 CCDC121Q6ZUS5 278 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 MAEAQ7L5Y9 396 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 CEP112Q8N8E3 955 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 ZFP91Q96JP5 570 aaPredicted RBP8.13□□□□□ -1.11
SCN9A-202ENST00000409435 NACC1Q96RE7 527 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 YME1L1Q96TA2 773 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 TNMDQ9H2S6 317 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 ACAD9Q9H845 621 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 FAM114A2Q9NRY5 505 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 POLR3EQ9NVU0 708 aa8.13□□□□□ -1.11
SCN9A-202ENST00000409435 MSCO60682 206 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 STMN1P16949 149 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 CPT1AP50416 773 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 SOX10P56693 466 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 CXCL9Q07325 125 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 CC2D1AQ6P1N0 951 aaPredicted RBP8.12□□□□□ -1.11
SCN9A-202ENST00000409435 EBAG9O00559 213 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 DYNC1LI2O43237 492 aaPredicted RBP8.12□□□□□ -1.11
SCN9A-202ENST00000409435 VAMP4O75379 141 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 SEC24BO95487 1268 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 CTDSPL2Q05D32 466 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 COG2Q14746 738 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 RBBP5Q15291 538 aaKnown RBP8.12□□□□□ -1.11
SCN9A-202ENST00000409435 WDR44Q5JSH3 913 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 CTU1Q7Z7A3 348 aaKnown RBP8.12□□□□□ -1.11
SCN9A-202ENST00000409435 PSTPIP2Q9H939 334 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 INPP5FQ9Y2H2 1132 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 CDC42BPAQ5VT25 1732 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 PNPLA7Q6ZV29 1317 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 ADAMTS13Q76LX8 1427 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 PDHXO00330 501 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 KIF5CO60282 957 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 PPFIA3O75145 1194 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 CIAO1O76071 339 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 STAG3L1P0CL83 205 aa8.12□□□□□ -1.11
SCN9A-202ENST00000409435 CCT6AP40227 531 aaKnown RBP8.12□□□□□ -1.11
SCN9A-202ENST00000409435 MAP3K7CLP57077 242 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms