RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 CABP7Q86V35 215 aa13.39□□□□□ -0.27
PCNX4-204ENST00000406949 TOGARAM1Q9Y4F4 1720 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 SEC31AO94979 1220 aaKnown RBP13.38□□□□□ -0.27
PCNX4-204ENST00000406949 NONOQ15233 471 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCNX4-204ENST00000406949 GRIK5Q16478 980 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 DYMQ7RTS9 669 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 CSGALNACT2Q8N6G5 542 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 DEF6Q9H4E7 631 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 NWD2Q9ULI1 1742 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 KRT18P05783 430 aaKnown RBP13.38□□□□□ -0.27
PCNX4-204ENST00000406949 RHOXF2BP0C7M4 288 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 GNA11P29992 359 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 TRAPPC10P48553 1259 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 SCNN1DP51172 638 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 COPB1P53618 953 aaKnown RBP13.38□□□□□ -0.27
PCNX4-204ENST00000406949 DPYDQ12882 1025 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 ENOX2Q16206 610 aaKnown RBP13.38□□□□□ -0.27
PCNX4-204ENST00000406949 SLF2Q8IX21 1173 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 RHOXF2Q9BQY4 288 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 LUC7L2Q9Y383 392 aaKnown RBP13.38□□□□□ -0.27
PCNX4-204ENST00000406949 LRP6O75581 1613 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 LONP1P36776 959 aaKnown RBP13.38□□□□□ -0.27
PCNX4-204ENST00000406949 SYCP1Q15431 976 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 SKIDA1Q1XH10 827 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 BARGINQ6ZT62 677 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 DGKHQ86XP1 1220 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 PIGSQ96S52 555 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 LEMD3Q9Y2U8 911 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 FAM205AQ6ZU69 1335 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 NUP98P52948 1817 aa13.38□□□□□ -0.27
PCNX4-204ENST00000406949 AKAP11Q9UKA4 1901 aa13.37□□□□□ -0.27
PCNX4-204ENST00000406949 PHLPP2Q6ZVD8 1323 aa13.37□□□□□ -0.27
PCNX4-204ENST00000406949 FAM237AA0A1B0GTK4 181 aa13.37□□□□□ -0.27
PCNX4-204ENST00000406949 CTAGE9A4FU28 777 aa13.37□□□□□ -0.27
PCNX4-204ENST00000406949 CDK8P49336 464 aa13.37□□□□□ -0.27
PCNX4-204ENST00000406949 TMEM266Q2M3C6 531 aa13.37□□□□□ -0.27
PCNX4-204ENST00000406949 CLEC10AQ8IUN9 316 aa13.37□□□□□ -0.27
PCNX4-204ENST00000406949 SHISA4Q96DD7 197 aa13.37□□□□□ -0.27
PCNX4-204ENST00000406949 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.37□□□□□ -0.27
PCNX4-204ENST00000406949 UBR2Q8IWV8 1755 aa13.37□□□□□ -0.27
PCNX4-204ENST00000406949 PRCPP42785 496 aa13.37□□□□□ -0.27
PCNX4-204ENST00000406949 CLCN6P51797 869 aa13.37□□□□□ -0.27
PCNX4-204ENST00000406949 REXO1Q8N1G1 1221 aaKnown RBP13.37□□□□□ -0.27
PCNX4-204ENST00000406949 ZC3H12CQ9C0D7 883 aaKnown RBP13.37□□□□□ -0.27
PCNX4-204ENST00000406949 TMEM60Q9H2L4 133 aa13.37□□□□□ -0.27
PCNX4-204ENST00000406949 GPSM2P81274 684 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 FUT2Q10981 343 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 REXO1L1PQ8IX06 675 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 GOLGA1Q92805 767 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 COA7Q96BR5 231 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 DISC1Q9NRI5 854 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 ADAMTS3O15072 1205 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 PLCG2P16885 1265 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 SARSP49591 514 aaKnown RBP13.36□□□□□ -0.27
PCNX4-204ENST00000406949 TBC1D8BQ0IIM8 1120 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 NR1I3Q14994 352 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 DOK7Q18PE1 504 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 RBM17Q96I25 401 aaKnown RBP13.36□□□□□ -0.27
PCNX4-204ENST00000406949 DRC1Q96MC2 740 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 A0A1B0GTH6 734 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 SERPINB2P05120 415 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 MCM6Q14566 821 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 FKBP15Q5T1M5 1219 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 DPP8Q6V1X1 898 aaPredicted RBP13.36□□□□□ -0.27
PCNX4-204ENST00000406949 FCHSD1Q86WN1 690 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 CAPZA3Q96KX2 299 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 MRPL44Q9H9J2 332 aaKnown RBP13.36□□□□□ -0.27
PCNX4-204ENST00000406949 CD209Q9NNX6 404 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 ARFGAP3Q9NP61 516 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 MYH7P12883 1935 aa13.36□□□□□ -0.27
PCNX4-204ENST00000406949 MFAP3LO75121 409 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 OR52Z1P0C646 297 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 ZNF18P17022 549 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 PLCG1P19174 1290 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 FXR1P51114 621 aaKnown RBP eCLIP13.35□□□□□ -0.27
PCNX4-204ENST00000406949 DNA2P51530 1060 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 AMPD3Q01432 767 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 TCP10Q12799 353 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 ZNF658Q5TYW1 1059 aaPredicted RBP13.35□□□□□ -0.27
PCNX4-204ENST00000406949 TRERF1Q96PN7 1200 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 ST7Q9NRC1 585 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 IL17RBQ9NRM6 502 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 DDX41Q9UJV9 622 aaKnown RBP13.35□□□□□ -0.27
PCNX4-204ENST00000406949 COL1A1P02452 1464 aaPredicted RBP13.35□□□□□ -0.27
PCNX4-204ENST00000406949 CNTNAP4Q9C0A0 1308 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 RAD51AP2Q09MP3 1159 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 SLC10A5Q5PT55 438 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 KRT25Q7Z3Z0 450 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 TBCKQ8TEA7 893 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 ZNF622Q969S3 477 aaKnown RBP eCLIP13.35□□□□□ -0.27
PCNX4-204ENST00000406949 CEP95Q96GE4 821 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 SLC39A2Q9NP94 309 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 MYH2Q9UKX2 1941 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 B4DLN1 442 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 PPP1R3GB7ZBB8 358 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 CHMP4BP1P59074 171 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 RCSD1Q6JBY9 416 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 CYP26C1Q6V0L0 522 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 RAD9BQ6WBX8 426 aa13.35□□□□□ -0.27
PCNX4-204ENST00000406949 RGS22Q8NE09 1264 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms