RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 DDIT3P35638 169 aa25.48■■□□□ 1.67
EPCAM-202ENST00000405271 ZYXQ15942 572 aaKnown RBP25.48■■□□□ 1.67
EPCAM-202ENST00000405271 TNS4Q8IZW8 715 aa25.48■■□□□ 1.67
EPCAM-202ENST00000405271 DDX11Q96FC9 970 aa25.48■■□□□ 1.67
EPCAM-202ENST00000405271 SLC26A6Q9BXS9 759 aa25.48■■□□□ 1.67
EPCAM-202ENST00000405271 ORC3Q9UBD5 711 aaPredicted RBP25.48■■□□□ 1.67
EPCAM-202ENST00000405271 RBBP6Q7Z6E9 1792 aaKnown RBP25.48■■□□□ 1.67
EPCAM-202ENST00000405271 GJA5P36382 358 aa25.47■■□□□ 1.67
EPCAM-202ENST00000405271 PPIL2Q13356 520 aa25.47■■□□□ 1.67
EPCAM-202ENST00000405271 CMTR1Q8N1G2 835 aaKnown RBP25.47■■□□□ 1.67
EPCAM-202ENST00000405271 PHKBQ93100 1093 aa25.47■■□□□ 1.67
EPCAM-202ENST00000405271 CIZ1Q9ULV3 898 aaPredicted RBP25.47■■□□□ 1.67
EPCAM-202ENST00000405271 TRIM75PA6NK02 468 aa25.47■■□□□ 1.67
EPCAM-202ENST00000405271 PRPF3O43395 683 aaKnown RBP25.47■■□□□ 1.67
EPCAM-202ENST00000405271 DEXIO95424 95 aa25.47■■□□□ 1.67
EPCAM-202ENST00000405271 PDCP20941 246 aa25.47■■□□□ 1.67
EPCAM-202ENST00000405271 AKAP17AQ02040 695 aaKnown RBP25.47■■□□□ 1.67
EPCAM-202ENST00000405271 SREBF2Q12772 1141 aa25.47■■□□□ 1.67
EPCAM-202ENST00000405271 KCTD1Q719H9 257 aa25.47■■□□□ 1.67
EPCAM-202ENST00000405271 SPICE1Q8N0Z3 855 aa25.47■■□□□ 1.67
EPCAM-202ENST00000405271 WASF1Q92558 559 aa25.47■■□□□ 1.67
EPCAM-202ENST00000405271 GPCPD1Q9NPB8 672 aa25.47■■□□□ 1.67
EPCAM-202ENST00000405271 A0A0G2JMZ2 1700 aa25.46■■□□□ 1.67
EPCAM-202ENST00000405271 PDIA4P13667 645 aaKnown RBP25.46■■□□□ 1.67
EPCAM-202ENST00000405271 FDPSP14324 419 aaKnown RBP25.46■■□□□ 1.67
EPCAM-202ENST00000405271 SH3D19Q5HYK7 790 aa25.46■■□□□ 1.67
EPCAM-202ENST00000405271 KIAA1755Q5JYT7 1200 aa25.46■■□□□ 1.67
EPCAM-202ENST00000405271 OTUD5Q96G74 571 aa25.46■■□□□ 1.67
EPCAM-202ENST00000405271 ISY1Q9ULR0 285 aaKnown RBP25.46■■□□□ 1.67
EPCAM-202ENST00000405271 MANSC4A6NHS7 340 aaPredicted RBP25.45■■□□□ 1.66
EPCAM-202ENST00000405271 INHBEP58166 350 aa25.45■■□□□ 1.66
EPCAM-202ENST00000405271 FAM83BQ5T0W9 1011 aa25.45■■□□□ 1.66
EPCAM-202ENST00000405271 BTNL9Q6UXG8 535 aa25.45■■□□□ 1.66
EPCAM-202ENST00000405271 CCDC82Q8N4S0 544 aa25.45■■□□□ 1.66
EPCAM-202ENST00000405271 CNKSR2Q8WXI2 1034 aa25.45■■□□□ 1.66
EPCAM-202ENST00000405271 OPTNQ96CV9 577 aa25.45■■□□□ 1.66
EPCAM-202ENST00000405271 NUP88Q99567 741 aaPredicted RBP25.45■■□□□ 1.66
EPCAM-202ENST00000405271 RIOX1Q9H6W3 641 aa25.45■■□□□ 1.66
EPCAM-202ENST00000405271 CXCL11O14625 94 aa25.44■■□□□ 1.66
EPCAM-202ENST00000405271 PLA2G6O60733 806 aa25.44■■□□□ 1.66
EPCAM-202ENST00000405271 IFFO2Q5TF58 517 aa25.44■■□□□ 1.66
EPCAM-202ENST00000405271 EMILIN3Q9NT22 766 aa25.44■■□□□ 1.66
EPCAM-202ENST00000405271 TMOD4Q9NZQ9 345 aa25.44■■□□□ 1.66
EPCAM-202ENST00000405271 KCNH4Q9UQ05 1017 aa25.44■■□□□ 1.66
EPCAM-202ENST00000405271 CYTH3O43739 400 aa25.43■■□□□ 1.66
EPCAM-202ENST00000405271 DTNBO60941 627 aa25.43■■□□□ 1.66
EPCAM-202ENST00000405271 VCAM1P19320 739 aa25.43■■□□□ 1.66
EPCAM-202ENST00000405271 STAT2P52630 851 aa25.43■■□□□ 1.66
EPCAM-202ENST00000405271 HMGCS2P54868 508 aa25.43■■□□□ 1.66
EPCAM-202ENST00000405271 FAM160B2Q86V87 743 aa25.43■■□□□ 1.66
EPCAM-202ENST00000405271 RGS22Q8NE09 1264 aa25.43■■□□□ 1.66
EPCAM-202ENST00000405271 PPFIA3O75145 1194 aa25.42■■□□□ 1.66
EPCAM-202ENST00000405271 SLC35G1Q2M3R5 365 aa25.42■■□□□ 1.66
EPCAM-202ENST00000405271 TTBK2Q6IQ55 1244 aa25.42■■□□□ 1.66
EPCAM-202ENST00000405271 RRP36Q96EU6 259 aaKnown RBP25.42■■□□□ 1.66
EPCAM-202ENST00000405271 FEM1BQ9UK73 627 aa25.42■■□□□ 1.66
EPCAM-202ENST00000405271 TCHHQ07283 1943 aa25.42■■□□□ 1.66
EPCAM-202ENST00000405271 TMEM232C9JQI7 657 aa25.42■■□□□ 1.66
EPCAM-202ENST00000405271 IRF6O14896 467 aa25.42■■□□□ 1.66
EPCAM-202ENST00000405271 LARP1BQ659C4 914 aaKnown RBP25.42■■□□□ 1.66
EPCAM-202ENST00000405271 CHURC1Q8WUH1 139 aa25.42■■□□□ 1.66
EPCAM-202ENST00000405271 UBA5Q9GZZ9 404 aa25.42■■□□□ 1.66
EPCAM-202ENST00000405271 CPVLQ9H3G5 476 aa25.42■■□□□ 1.66
EPCAM-202ENST00000405271 CHMP5Q9NZZ3 219 aa25.42■■□□□ 1.66
EPCAM-202ENST00000405271 V9GY48 417 aaPredicted RBP25.42■■□□□ 1.66
EPCAM-202ENST00000405271 SMCHD1A6NHR9 2005 aa25.41■■□□□ 1.66
EPCAM-202ENST00000405271 A0A0G2JLL6 359 aaPredicted RBP25.41■■□□□ 1.66
EPCAM-202ENST00000405271 IKQ13123 557 aaPredicted RBP25.41■■□□□ 1.66
EPCAM-202ENST00000405271 SYDE2Q5VT97 1194 aa25.41■■□□□ 1.66
EPCAM-202ENST00000405271 PRRT2Q7Z6L0 340 aaPredicted RBP25.41■■□□□ 1.66
EPCAM-202ENST00000405271 ADGRF4Q8IZF3 695 aa25.41■■□□□ 1.66
EPCAM-202ENST00000405271 PROCA1Q8NCQ7 364 aaPredicted RBP25.41■■□□□ 1.66
EPCAM-202ENST00000405271 ALG1Q9BT22 464 aa25.41■■□□□ 1.66
EPCAM-202ENST00000405271 SEC63Q9UGP8 760 aaKnown RBP25.41■■□□□ 1.66
EPCAM-202ENST00000405271 TBC1D8O95759 1140 aa25.4■■□□□ 1.66
EPCAM-202ENST00000405271 SCG2P13521 617 aa25.4■■□□□ 1.66
EPCAM-202ENST00000405271 SYT1P21579 422 aa25.4■■□□□ 1.66
EPCAM-202ENST00000405271 NUCB2P80303 420 aa25.4■■□□□ 1.66
EPCAM-202ENST00000405271 PKN1Q16512 942 aa25.4■■□□□ 1.66
EPCAM-202ENST00000405271 PFKFB3Q16875 520 aaPredicted RBP25.4■■□□□ 1.66
EPCAM-202ENST00000405271 IFNL1Q8IU54 200 aa25.4■■□□□ 1.66
EPCAM-202ENST00000405271 MTMR8Q96EF0 704 aa25.4■■□□□ 1.66
EPCAM-202ENST00000405271 MS4A4AQ96JQ5 239 aa25.4■■□□□ 1.66
EPCAM-202ENST00000405271 SLC16A2P36021 539 aa25.39■■□□□ 1.66
EPCAM-202ENST00000405271 DGKZQ13574 1117 aa25.39■■□□□ 1.66
EPCAM-202ENST00000405271 C8orf76Q96K31 380 aa25.39■■□□□ 1.66
EPCAM-202ENST00000405271 RPAP3Q9H6T3 665 aaPredicted RBP25.39■■□□□ 1.66
EPCAM-202ENST00000405271 JMJD4Q9H9V9 463 aa25.39■■□□□ 1.66
EPCAM-202ENST00000405271 TESPA1A2RU30 521 aaPredicted RBP25.38■■□□□ 1.65
EPCAM-202ENST00000405271 hCG_1984214I3L0E3 225 aa25.38■■□□□ 1.65
EPCAM-202ENST00000405271 IGF2BP3O00425 579 aaKnown RBP eCLIP25.38■■□□□ 1.65
EPCAM-202ENST00000405271 STX6O43752 255 aa25.38■■□□□ 1.65
EPCAM-202ENST00000405271 XBP1P17861 261 aa25.38■■□□□ 1.65
EPCAM-202ENST00000405271 ZNF713Q8N859 430 aaPredicted RBP25.38■■□□□ 1.65
EPCAM-202ENST00000405271 PTPN18Q99952 460 aa25.38■■□□□ 1.65
EPCAM-202ENST00000405271 TANGO6Q9C0B7 1094 aa25.38■■□□□ 1.65
EPCAM-202ENST00000405271 ALDH1A1P00352 501 aa25.37■■□□□ 1.65
EPCAM-202ENST00000405271 TRIM29Q14134 588 aa25.37■■□□□ 1.65
EPCAM-202ENST00000405271 FAM177A1Q8N128 213 aaPredicted RBP25.37■■□□□ 1.65
EPCAM-202ENST00000405271 PIGSQ96S52 555 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms