RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 NBPF3Q9H094 633 aa15.76■□□□□ 0.11
SDF4-203ENST00000403997 HIP1O00291 1037 aa15.75■□□□□ 0.11
SDF4-203ENST00000403997 DLL1O00548 723 aa15.75■□□□□ 0.11
SDF4-203ENST00000403997 MCCP23508 829 aa15.75■□□□□ 0.11
SDF4-203ENST00000403997 KCTD2Q14681 263 aa15.75■□□□□ 0.11
SDF4-203ENST00000403997 TEX13BQ9BXU2 312 aa15.75■□□□□ 0.11
SDF4-203ENST00000403997 IL17RBQ9NRM6 502 aa15.75■□□□□ 0.11
SDF4-203ENST00000403997 MYH4Q9Y623 1939 aa15.74■□□□□ 0.11
SDF4-203ENST00000403997 A0A0G2JMZ2 1700 aa15.74■□□□□ 0.11
SDF4-203ENST00000403997 TMEM232C9JQI7 657 aa15.74■□□□□ 0.11
SDF4-203ENST00000403997 PGK2P07205 417 aa15.74■□□□□ 0.11
SDF4-203ENST00000403997 FGRP09769 529 aa15.74■□□□□ 0.11
SDF4-203ENST00000403997 SLC1A4P43007 532 aa15.74■□□□□ 0.11
SDF4-203ENST00000403997 MNX1P50219 401 aaPredicted RBP15.74■□□□□ 0.11
SDF4-203ENST00000403997 IKQ13123 557 aaPredicted RBP15.74■□□□□ 0.11
SDF4-203ENST00000403997 SNRNP48Q6IEG0 339 aaKnown RBP15.74■□□□□ 0.11
SDF4-203ENST00000403997 TRPV1Q8NER1 839 aa15.74■□□□□ 0.11
SDF4-203ENST00000403997 CHURC1Q8WUH1 139 aa15.74■□□□□ 0.11
SDF4-203ENST00000403997 GMCL1Q96IK5 515 aa15.74■□□□□ 0.11
SDF4-203ENST00000403997 MAML3Q96JK9 1138 aa15.74■□□□□ 0.11
SDF4-203ENST00000403997 C11orf49Q9H6J7 331 aa15.74■□□□□ 0.11
SDF4-203ENST00000403997 RAVER2Q9HCJ3 691 aaKnown RBP15.74■□□□□ 0.11
SDF4-203ENST00000403997 DDX20Q9UHI6 824 aaKnown RBP15.74■□□□□ 0.11
SDF4-203ENST00000403997 MTMR7Q9Y216 660 aa15.74■□□□□ 0.11
SDF4-203ENST00000403997 PARP14Q460N5 1801 aa15.73■□□□□ 0.11
SDF4-203ENST00000403997 CEP290O15078 2479 aa15.73■□□□□ 0.11
SDF4-203ENST00000403997 MSCO60682 206 aa15.73■□□□□ 0.11
SDF4-203ENST00000403997 IGHA2P01877 340 aa15.73■□□□□ 0.11
SDF4-203ENST00000403997 PDE4AP27815 886 aa15.73■□□□□ 0.11
SDF4-203ENST00000403997 STAT2P52630 851 aa15.73■□□□□ 0.11
SDF4-203ENST00000403997 PRAMEF19Q5SWL8 479 aa15.73■□□□□ 0.11
SDF4-203ENST00000403997 MFSD6Q6ZSS7 791 aa15.73■□□□□ 0.11
SDF4-203ENST00000403997 FAM160B2Q86V87 743 aa15.73■□□□□ 0.11
SDF4-203ENST00000403997 DDX11Q96FC9 970 aa15.73■□□□□ 0.11
SDF4-203ENST00000403997 SLC38A10Q9HBR0 1119 aa15.73■□□□□ 0.11
SDF4-203ENST00000403997 COLQQ9Y215 455 aaPredicted RBP15.73■□□□□ 0.11
SDF4-203ENST00000403997 RIPK3Q9Y572 518 aa15.73■□□□□ 0.11
SDF4-203ENST00000403997 COL11A1P12107 1806 aaPredicted RBP15.73■□□□□ 0.11
SDF4-203ENST00000403997 ZMYM6O95789 1325 aa15.72■□□□□ 0.11
SDF4-203ENST00000403997 ZNF213O14771 459 aa15.72■□□□□ 0.11
SDF4-203ENST00000403997 ATP2A1O14983 1001 aa15.72■□□□□ 0.11
SDF4-203ENST00000403997 CYBAP13498 195 aa15.72■□□□□ 0.11
SDF4-203ENST00000403997 AKNAD1Q5T1N1 836 aa15.72■□□□□ 0.11
SDF4-203ENST00000403997 RCSD1Q6JBY9 416 aa15.72■□□□□ 0.11
SDF4-203ENST00000403997 KCTD1Q719H9 257 aa15.72■□□□□ 0.11
SDF4-203ENST00000403997 STAG1Q8WVM7 1258 aa15.72■□□□□ 0.11
SDF4-203ENST00000403997 DIS3Q9Y2L1 958 aaKnown RBP15.72■□□□□ 0.11
SDF4-203ENST00000403997 ZNFX1Q9P2E3 1918 aaKnown RBP15.71■□□□□ 0.11
SDF4-203ENST00000403997 FDX1P10109 184 aa15.71■□□□□ 0.11
SDF4-203ENST00000403997 PCP11498 1178 aaKnown RBP15.71■□□□□ 0.11
SDF4-203ENST00000403997 NOVP48745 357 aa15.71■□□□□ 0.11
SDF4-203ENST00000403997 ZNF792Q3KQV3 632 aa15.71■□□□□ 0.11
SDF4-203ENST00000403997 RNF41Q9H4P4 317 aaPredicted RBP15.71■□□□□ 0.11
SDF4-203ENST00000403997 SEPT4O43236 478 aa15.7■□□□□ 0.1
SDF4-203ENST00000403997 PLA2G6O60733 806 aa15.7■□□□□ 0.1
SDF4-203ENST00000403997 TOP1P11387 765 aaKnown RBP15.7■□□□□ 0.1
SDF4-203ENST00000403997 OAZ1P54368 228 aa15.7■□□□□ 0.1
SDF4-203ENST00000403997 CCDC96Q2M329 555 aa15.7■□□□□ 0.1
SDF4-203ENST00000403997 TTC22Q5TAA0 569 aa15.7■□□□□ 0.1
SDF4-203ENST00000403997 ANO1Q5XXA6 986 aa15.7■□□□□ 0.1
SDF4-203ENST00000403997 CHRDL2Q6WN34 429 aa15.7■□□□□ 0.1
SDF4-203ENST00000403997 TBC1D10CQ8IV04 446 aa15.7■□□□□ 0.1
SDF4-203ENST00000403997 C7orf61Q8IZ16 206 aa15.7■□□□□ 0.1
SDF4-203ENST00000403997 TINF2Q9BSI4 451 aa15.7■□□□□ 0.1
SDF4-203ENST00000403997 TCP11L1Q9NUJ3 509 aa15.7■□□□□ 0.1
SDF4-203ENST00000403997 ZNF236Q9UL36 1845 aa15.7■□□□□ 0.1
SDF4-203ENST00000403997 PFASO15067 1338 aa15.69■□□□□ 0.1
SDF4-203ENST00000403997 MYCNP04198 464 aaPredicted RBP15.69■□□□□ 0.1
SDF4-203ENST00000403997 GSPT1P15170 499 aaKnown RBP15.69■□□□□ 0.1
SDF4-203ENST00000403997 SNAP25P60880 206 aa15.69■□□□□ 0.1
SDF4-203ENST00000403997 RASGRP2Q7LDG7 609 aa15.69■□□□□ 0.1
SDF4-203ENST00000403997 ANKRD35Q8N283 1001 aa15.69■□□□□ 0.1
SDF4-203ENST00000403997 CHST13Q8NET6 341 aa15.69■□□□□ 0.1
SDF4-203ENST00000403997 DCAF4Q8WV16 495 aa15.69■□□□□ 0.1
SDF4-203ENST00000403997 ESR2Q92731 530 aa15.69■□□□□ 0.1
SDF4-203ENST00000403997 TMEM47Q9BQJ4 181 aa15.69■□□□□ 0.1
SDF4-203ENST00000403997 DSCC1Q9BVC3 393 aa15.69■□□□□ 0.1
SDF4-203ENST00000403997 SENP6Q9GZR1 1112 aaPredicted RBP15.69■□□□□ 0.1
SDF4-203ENST00000403997 HOMER2Q9NSB8 354 aa15.69■□□□□ 0.1
SDF4-203ENST00000403997 FBXO40Q9UH90 709 aa15.69■□□□□ 0.1
SDF4-203ENST00000403997 CTNNA3Q9UI47 895 aa15.69■□□□□ 0.1
SDF4-203ENST00000403997 COL6A1P12109 1028 aa15.68■□□□□ 0.1
SDF4-203ENST00000403997 CCDC174Q6PII3 467 aa15.68■□□□□ 0.1
SDF4-203ENST00000403997 ARRDC4Q8NCT1 418 aa15.68■□□□□ 0.1
SDF4-203ENST00000403997 AGBL1Q96MI9 1066 aa15.68■□□□□ 0.1
SDF4-203ENST00000403997 TTC14Q96N46 770 aa15.68■□□□□ 0.1
SDF4-203ENST00000403997 PRR12Q9ULL5 1215 aa15.68■□□□□ 0.1
SDF4-203ENST00000403997 DNAJC25-GNG10A0A024R161 153 aa15.67■□□□□ 0.1
SDF4-203ENST00000403997 IMMTQ16891 758 aaKnown RBP15.67■□□□□ 0.1
SDF4-203ENST00000403997 GJC2Q5T442 439 aaPredicted RBP15.67■□□□□ 0.1
SDF4-203ENST00000403997 TTBK2Q6IQ55 1244 aa15.67■□□□□ 0.1
SDF4-203ENST00000403997 ZKSCAN3Q9BRR0 538 aa15.67■□□□□ 0.1
SDF4-203ENST00000403997 GPCPD1Q9NPB8 672 aa15.67■□□□□ 0.1
SDF4-203ENST00000403997 NRBP1Q9UHY1 535 aa15.67■□□□□ 0.1
SDF4-203ENST00000403997 ZMYND8Q9ULU4 1186 aaPredicted RBP15.67■□□□□ 0.1
SDF4-203ENST00000403997 CNPY2Q9Y2B0 182 aa15.67■□□□□ 0.1
SDF4-203ENST00000403997 NEDD4P46934 1319 aa15.67■□□□□ 0.1
SDF4-203ENST00000403997 FRMPD2Q68DX3 1309 aaPredicted RBP15.67■□□□□ 0.1
SDF4-203ENST00000403997 DNM1LO00429 736 aa15.66■□□□□ 0.1
SDF4-203ENST00000403997 ALAS1P13196 640 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms