RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 MSANTD4Q8NCY6 345 aa10.27□□□□□ -0.76
HPS4-203ENST00000402105 BCAS4Q8TDM0 211 aa10.27□□□□□ -0.76
HPS4-203ENST00000402105 RRP36Q96EU6 259 aaKnown RBP10.27□□□□□ -0.76
HPS4-203ENST00000402105 ACSBG1Q96GR2 724 aa10.27□□□□□ -0.76
HPS4-203ENST00000402105 NOC4LQ9BVI4 516 aaKnown RBP10.27□□□□□ -0.76
HPS4-203ENST00000402105 SELENOOQ9BVL4 669 aa10.27□□□□□ -0.76
HPS4-203ENST00000402105 MLXIPQ9HAP2 919 aa10.27□□□□□ -0.76
HPS4-203ENST00000402105 STX8Q9UNK0 236 aa10.27□□□□□ -0.76
HPS4-203ENST00000402105 STK36Q9NRP7 1315 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 PSMA7O14818 248 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 SSBP05455 408 aaKnown RBP eCLIP10.27□□□□□ -0.77
HPS4-203ENST00000402105 TDRD12Q587J7 1177 aaKnown RBP10.27□□□□□ -0.77
HPS4-203ENST00000402105 SMIM5Q71RC9 77 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 MB21D1Q8N884 522 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 STAG1Q8WVM7 1258 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 MTRQ99707 1265 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 RNF26Q9BY78 433 aaPredicted RBP10.27□□□□□ -0.77
HPS4-203ENST00000402105 RAB21Q9UL25 225 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 REXO2Q9Y3B8 237 aaKnown RBP10.27□□□□□ -0.77
HPS4-203ENST00000402105 MRC1P22897 1456 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 RCCD1A6NED2 376 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 MOCS3O95396 460 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 CYLC1P35663 651 aaPredicted RBP10.27□□□□□ -0.77
HPS4-203ENST00000402105 USP14P54578 494 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 GNGT1P63211 74 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 PDE4DQ08499 809 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 DTHD1Q6ZMT9 781 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 DYMQ7RTS9 669 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 SRBD1Q8N5C6 995 aaKnown RBP10.27□□□□□ -0.77
HPS4-203ENST00000402105 HNRNPLLQ8WVV9 542 aaKnown RBP10.27□□□□□ -0.77
HPS4-203ENST00000402105 CCDC51Q96ER9 411 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 NHEJ1Q9H9Q4 299 aaPredicted RBP10.27□□□□□ -0.77
HPS4-203ENST00000402105 TFCP2L1Q9NZI6 479 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 LAMA4Q16363 1823 aa10.27□□□□□ -0.77
HPS4-203ENST00000402105 ESYT3A0FGR9 886 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 RAD21O60216 631 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 GUCY2FP51841 1108 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 MNAT1P51948 309 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 KRT83P78385 493 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 LETM2Q2VYF4 491 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 SUSD4Q5VX71 490 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 PROCA1Q8NCQ7 364 aaPredicted RBP10.26□□□□□ -0.77
HPS4-203ENST00000402105 TUBGCP2Q9BSJ2 902 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 HAUS4Q9H6D7 363 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 KAT14Q9H8E8 782 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 RWDD2AQ9UIY3 292 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 PDE2AO00408 941 aaPredicted RBP10.26□□□□□ -0.77
HPS4-203ENST00000402105 GTPBP6O43824 516 aaPredicted RBP10.26□□□□□ -0.77
HPS4-203ENST00000402105 RNF187Q5TA31 235 aaPredicted RBP10.26□□□□□ -0.77
HPS4-203ENST00000402105 ZNF658Q5TYW1 1059 aaPredicted RBP10.26□□□□□ -0.77
HPS4-203ENST00000402105 SECISBP2LQ93073 1101 aaKnown RBP10.26□□□□□ -0.77
HPS4-203ENST00000402105 LRRC1Q9BTT6 524 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 PHF20Q9BVI0 1012 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 SLC39A2Q9NP94 309 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 NIP7Q9Y221 180 aaKnown RBP eCLIP10.26□□□□□ -0.77
HPS4-203ENST00000402105 ATP2C2O75185 946 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 HERVK_113P62684 666 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 IL17AQ16552 155 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 ANKRD18AQ8IVF6 992 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 SH2D3CQ8N5H7 860 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 RMND1Q9NWS8 449 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 BCCIPQ9P287 314 aaKnown RBP eCLIP10.26□□□□□ -0.77
HPS4-203ENST00000402105 HPCAL4Q9UM19 191 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 JRKLQ9Y4A0 524 aa10.26□□□□□ -0.77
HPS4-203ENST00000402105 EBAG9O00559 213 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 SYF2O95926 243 aaKnown RBP10.25□□□□□ -0.77
HPS4-203ENST00000402105 GNAT2P19087 354 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 KCNQ4P56696 695 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 CHRNDQ07001 517 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 NFRKBQ6P4R8 1299 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 TMC4Q7Z404 712 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.25□□□□□ -0.77
HPS4-203ENST00000402105 ZHX3Q9H4I2 956 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 KANSL2Q9H9L4 492 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 MED4Q9NPJ6 270 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 NLRC4Q9NPP4 1024 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 FBXO3Q9UK99 471 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 OVOS2A0A0G2JMS6 1433 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 RTL9Q8NET4 1388 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 KDM4FA0A1W2PPD8 638 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 MARCH6O60337 910 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 PBX1P40424 430 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 USP5P45974 858 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 COG1Q8WTW3 980 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 MCM9Q9NXL9 1143 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 LIMA1Q9UHB6 759 aaKnown RBP10.25□□□□□ -0.77
HPS4-203ENST00000402105 SHTN1A0MZ66 631 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 FCER1AP12319 257 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 SCG2P13521 617 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 ARID4AP29374 1257 aaPredicted RBP10.25□□□□□ -0.77
HPS4-203ENST00000402105 IRX3P78415 501 aaPredicted RBP10.25□□□□□ -0.77
HPS4-203ENST00000402105 CKAP4Q07065 602 aaKnown RBP10.25□□□□□ -0.77
HPS4-203ENST00000402105 CACNA2D4Q7Z3S7 1137 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 VGLL2Q8N8G2 317 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 EXOC1Q9NV70 894 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 PSD3Q9NYI0 1048 aa10.25□□□□□ -0.77
HPS4-203ENST00000402105 MKRN1Q9UHC7 482 aaKnown RBP10.25□□□□□ -0.77
HPS4-203ENST00000402105 DMGDHQ9UI17 866 aaKnown RBP10.25□□□□□ -0.77
HPS4-203ENST00000402105 AFDNP55196 1824 aaKnown RBP10.25□□□□□ -0.77
HPS4-203ENST00000402105 MROH5Q6ZUA9 1318 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms