RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 PPP4R3BQ5MIZ7 849 aa18.77■□□□□ 0.6
ATG4B-203ENST00000400772 TTC22Q5TAA0 569 aa18.77■□□□□ 0.6
ATG4B-203ENST00000400772 NECAB2Q7Z6G3 386 aa18.77■□□□□ 0.6
ATG4B-203ENST00000400772 TBC1D10CQ8IV04 446 aa18.77■□□□□ 0.6
ATG4B-203ENST00000400772 CHMP4CQ96CF2 233 aa18.77■□□□□ 0.6
ATG4B-203ENST00000400772 GMCL1Q96IK5 515 aa18.77■□□□□ 0.6
ATG4B-203ENST00000400772 TEX13BQ9BXU2 312 aa18.77■□□□□ 0.6
ATG4B-203ENST00000400772 IL25Q9H293 177 aa18.77■□□□□ 0.6
ATG4B-203ENST00000400772 SLC38A10Q9HBR0 1119 aa18.77■□□□□ 0.6
ATG4B-203ENST00000400772 DIAPH3Q9NSV4 1193 aa18.77■□□□□ 0.6
ATG4B-203ENST00000400772 TMEM232C9JQI7 657 aa18.76■□□□□ 0.59
ATG4B-203ENST00000400772 HIP1O00291 1037 aa18.76■□□□□ 0.59
ATG4B-203ENST00000400772 ZBED4O75132 1171 aa18.76■□□□□ 0.59
ATG4B-203ENST00000400772 CYBAP13498 195 aa18.76■□□□□ 0.59
ATG4B-203ENST00000400772 SLC1A4P43007 532 aa18.76■□□□□ 0.59
ATG4B-203ENST00000400772 MFAP1P55081 439 aaKnown RBP18.76■□□□□ 0.59
ATG4B-203ENST00000400772 ZNF792Q3KQV3 632 aa18.76■□□□□ 0.59
ATG4B-203ENST00000400772 RRP12Q5JTH9 1297 aaKnown RBP18.76■□□□□ 0.59
ATG4B-203ENST00000400772 AKNAD1Q5T1N1 836 aa18.76■□□□□ 0.59
ATG4B-203ENST00000400772 SNRNP48Q6IEG0 339 aaKnown RBP18.76■□□□□ 0.59
ATG4B-203ENST00000400772 RASGRP2Q7LDG7 609 aa18.76■□□□□ 0.59
ATG4B-203ENST00000400772 STAG1Q8WVM7 1258 aa18.76■□□□□ 0.59
ATG4B-203ENST00000400772 MAML3Q96JK9 1138 aa18.76■□□□□ 0.59
ATG4B-203ENST00000400772 RAVER2Q9HCJ3 691 aaKnown RBP18.76■□□□□ 0.59
ATG4B-203ENST00000400772 TOMM22Q9NS69 142 aa18.76■□□□□ 0.59
ATG4B-203ENST00000400772 TCP11L1Q9NUJ3 509 aa18.76■□□□□ 0.59
ATG4B-203ENST00000400772 SLC5A4Q9NY91 659 aa18.76■□□□□ 0.59
ATG4B-203ENST00000400772 COPB2P35606 906 aa18.75■□□□□ 0.59
ATG4B-203ENST00000400772 PRAMEF19Q5SWL8 479 aa18.75■□□□□ 0.59
ATG4B-203ENST00000400772 CPXCR1Q8N123 301 aa18.75■□□□□ 0.59
ATG4B-203ENST00000400772 C11orf49Q9H6J7 331 aa18.75■□□□□ 0.59
ATG4B-203ENST00000400772 DDX20Q9UHI6 824 aaKnown RBP18.75■□□□□ 0.59
ATG4B-203ENST00000400772 PLA2G6O60733 806 aa18.74■□□□□ 0.59
ATG4B-203ENST00000400772 CNGA1P29973 690 aa18.74■□□□□ 0.59
ATG4B-203ENST00000400772 KCTD2Q14681 263 aa18.74■□□□□ 0.59
ATG4B-203ENST00000400772 RCSD1Q6JBY9 416 aa18.74■□□□□ 0.59
ATG4B-203ENST00000400772 MFSD6Q6ZSS7 791 aa18.74■□□□□ 0.59
ATG4B-203ENST00000400772 KCTD1Q719H9 257 aa18.74■□□□□ 0.59
ATG4B-203ENST00000400772 TMEM47Q9BQJ4 181 aa18.74■□□□□ 0.59
ATG4B-203ENST00000400772 DIS3Q9Y2L1 958 aaKnown RBP18.74■□□□□ 0.59
ATG4B-203ENST00000400772 PFASO15067 1338 aa18.74■□□□□ 0.59
ATG4B-203ENST00000400772 ZNF213O14771 459 aa18.73■□□□□ 0.59
ATG4B-203ENST00000400772 PCP11498 1178 aaKnown RBP18.73■□□□□ 0.59
ATG4B-203ENST00000400772 COL6A1P12109 1028 aa18.73■□□□□ 0.59
ATG4B-203ENST00000400772 STAT2P52630 851 aa18.73■□□□□ 0.59
ATG4B-203ENST00000400772 OAZ1P54368 228 aa18.73■□□□□ 0.59
ATG4B-203ENST00000400772 FAM160B2Q86V87 743 aa18.73■□□□□ 0.59
ATG4B-203ENST00000400772 CHURC1Q8WUH1 139 aa18.73■□□□□ 0.59
ATG4B-203ENST00000400772 DSCC1Q9BVC3 393 aa18.73■□□□□ 0.59
ATG4B-203ENST00000400772 ZNF536O15090 1300 aa18.73■□□□□ 0.59
ATG4B-203ENST00000400772 NEDD4P46934 1319 aa18.73■□□□□ 0.59
ATG4B-203ENST00000400772 DNAJC25-GNG10A0A024R161 153 aa18.72■□□□□ 0.59
ATG4B-203ENST00000400772 EVI5O60447 810 aa18.72■□□□□ 0.59
ATG4B-203ENST00000400772 SLC4A3P48751 1232 aa18.72■□□□□ 0.59
ATG4B-203ENST00000400772 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.72■□□□□ 0.59
ATG4B-203ENST00000400772 COLQQ9Y215 455 aaPredicted RBP18.72■□□□□ 0.59
ATG4B-203ENST00000400772 CTDP1Q9Y5B0 961 aaPredicted RBP18.72■□□□□ 0.59
ATG4B-203ENST00000400772 ALPK3Q96L96 1907 aa18.72■□□□□ 0.59
ATG4B-203ENST00000400772 MSCO60682 206 aa18.71■□□□□ 0.59
ATG4B-203ENST00000400772 FDX1P10109 184 aa18.71■□□□□ 0.59
ATG4B-203ENST00000400772 TOP1P11387 765 aaKnown RBP18.71■□□□□ 0.59
ATG4B-203ENST00000400772 HABP4Q5JVS0 413 aaKnown RBP18.71■□□□□ 0.59
ATG4B-203ENST00000400772 DCAF4Q8WV16 495 aa18.71■□□□□ 0.59
ATG4B-203ENST00000400772 AGBL1Q96MI9 1066 aa18.71■□□□□ 0.59
ATG4B-203ENST00000400772 TINF2Q9BSI4 451 aa18.71■□□□□ 0.59
ATG4B-203ENST00000400772 RNF41Q9H4P4 317 aaPredicted RBP18.71■□□□□ 0.59
ATG4B-203ENST00000400772 PRR12Q9ULL5 1215 aa18.71■□□□□ 0.59
ATG4B-203ENST00000400772 ISY1Q9ULR0 285 aaKnown RBP18.71■□□□□ 0.59
ATG4B-203ENST00000400772 MTMR7Q9Y216 660 aa18.71■□□□□ 0.59
ATG4B-203ENST00000400772 NR2E3Q9Y5X4 410 aa18.71■□□□□ 0.59
ATG4B-203ENST00000400772 SEPT4O43236 478 aa18.7■□□□□ 0.58
ATG4B-203ENST00000400772 TAL1P17542 331 aaPredicted RBP18.7■□□□□ 0.58
ATG4B-203ENST00000400772 SNAP25P60880 206 aa18.7■□□□□ 0.58
ATG4B-203ENST00000400772 ANO1Q5XXA6 986 aa18.7■□□□□ 0.58
ATG4B-203ENST00000400772 TTBK2Q6IQ55 1244 aa18.7■□□□□ 0.58
ATG4B-203ENST00000400772 CHST13Q8NET6 341 aa18.7■□□□□ 0.58
ATG4B-203ENST00000400772 TTC14Q96N46 770 aa18.7■□□□□ 0.58
ATG4B-203ENST00000400772 FRMPD3Q5JV73 1810 aa18.7■□□□□ 0.58
ATG4B-203ENST00000400772 CHMLP26374 656 aa18.69■□□□□ 0.58
ATG4B-203ENST00000400772 IKQ13123 557 aaPredicted RBP18.69■□□□□ 0.58
ATG4B-203ENST00000400772 BTNL9Q6UXG8 535 aa18.69■□□□□ 0.58
ATG4B-203ENST00000400772 ESR2Q92731 530 aa18.69■□□□□ 0.58
ATG4B-203ENST00000400772 DDX11Q96FC9 970 aa18.69■□□□□ 0.58
ATG4B-203ENST00000400772 FGD4Q96M96 766 aa18.69■□□□□ 0.58
ATG4B-203ENST00000400772 ZKSCAN3Q9BRR0 538 aa18.69■□□□□ 0.58
ATG4B-203ENST00000400772 FBXO40Q9UH90 709 aa18.69■□□□□ 0.58
ATG4B-203ENST00000400772 NRBP1Q9UHY1 535 aa18.69■□□□□ 0.58
ATG4B-203ENST00000400772 PLXNA1Q9UIW2 1896 aa18.69■□□□□ 0.58
ATG4B-203ENST00000400772 SLC34A2O95436 690 aa18.68■□□□□ 0.58
ATG4B-203ENST00000400772 SNAI1O95863 264 aaPredicted RBP18.68■□□□□ 0.58
ATG4B-203ENST00000400772 ZNF865P0CJ78 1059 aaPredicted RBP18.68■□□□□ 0.58
ATG4B-203ENST00000400772 PDHBP11177 359 aa18.68■□□□□ 0.58
ATG4B-203ENST00000400772 SLC16A2P36021 539 aa18.68■□□□□ 0.58
ATG4B-203ENST00000400772 CCDC96Q2M329 555 aa18.68■□□□□ 0.58
ATG4B-203ENST00000400772 MAMDC4Q6UXC1 1216 aa18.68■□□□□ 0.58
ATG4B-203ENST00000400772 CHRDL2Q6WN34 429 aa18.68■□□□□ 0.58
ATG4B-203ENST00000400772 HOMER2Q9NSB8 354 aa18.68■□□□□ 0.58
ATG4B-203ENST00000400772 KDM4AO75164 1064 aa18.67■□□□□ 0.58
ATG4B-203ENST00000400772 SNHG28P0DPA3 235 aa18.67■□□□□ 0.58
ATG4B-203ENST00000400772 IMMTQ16891 758 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms