RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 FAM170AA1A519 330 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 POLR2BP30876 1174 aaKnown RBP13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 NLRC4Q9NPP4 1024 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 ADPGKQ9BRR6 497 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 CCNL1Q9UK58 526 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 PPP1R9AQ9ULJ8 1098 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 SESN3P58005 492 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 SUDS3Q9H7L9 328 aaPredicted RBP13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 HYOU1Q9Y4L1 999 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 ABCC1P33527 1531 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 MAP3K1Q13233 1512 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 SNX14Q9Y5W7 946 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 CAPN7Q9Y6W3 813 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 K7ENM7 598 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 TRIM37O94972 964 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 LUC7L3O95232 432 aaKnown RBP13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 SRGAP2BP0DMP2 458 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 CAPN12Q6ZSI9 719 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 SPATS2Q86XZ4 545 aaKnown RBP13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 TGFBRAP1Q8WUH2 860 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 RUNDC3BQ96NL0 473 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 A6NJR5 290 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 H0YCG3 227 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 RAPH1Q70E73 1250 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 TSC1Q92574 1164 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 HESX1Q9UBX0 185 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 GNGT2O14610 69 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 NIM1KQ8IY84 436 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 PHKBQ93100 1093 aa13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 BZW2Q9Y6E2 419 aaKnown RBP13.49□□□□□ -0.25
CACNA1C-219ENST00000399649 KCNJ18B7U540 433 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 PIK3CAP42336 1068 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 PNOCQ13519 176 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 KCNJ12Q14500 433 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 SESTD1Q86VW0 696 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 LRRC8CQ8TDW0 803 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 PARD3BQ8TEW8 1205 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 FAM89AQ96GI7 184 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 PANK4Q9NVE7 773 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 SART1O43290 800 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 HSPA2P54652 639 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 SLFN12Q8IYM2 578 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 REXO1Q8N1G1 1221 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 METTL22Q9BUU2 404 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 KIF9Q9HAQ2 790 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 CCPG1Q9ULG6 757 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 ASPHQ12797 758 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 MYOCDQ8IZQ8 938 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 SPATA5Q8NB90 893 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 STAG1Q8WVM7 1258 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 LARSQ9P2J5 1176 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 AOX1Q06278 1338 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 YTHDC2Q9H6S0 1430 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 GSTA4O15217 222 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 PRDM1O75626 825 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 APOEP02649 317 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 BFSP1Q12934 665 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 MORC3Q14149 939 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 KAZNQ674X7 775 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 MCTP2Q6DN12 878 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 ZNF449Q6P9G9 518 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 MYL10Q9BUA6 226 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 TPX2Q9ULW0 747 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 KCNJ14Q9UNX9 436 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 MROH5Q6ZUA9 1318 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 TYW5A2RUC4 315 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 XPAP23025 273 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 TIMM10P62072 90 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 MICAL1Q8TDZ2 1067 aa13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 EIF2AQ9BY44 585 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-219ENST00000399649 SLC8A1P32418 973 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 STX1BP61266 288 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 BRD3Q15059 726 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 MAPKAPK5Q8IW41 473 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 CHURC1Q8WUH1 139 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 ATP8A2Q9NTI2 1148 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 EPS15L1Q9UBC2 864 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 CSADQ9Y600 493 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 PSDA5PKW4 1024 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 SMCO2A6NFE2 343 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 MAP2K2P36507 400 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 IQCB1Q15051 598 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 MAD1L1Q9Y6D9 718 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 SORBS3O60504 671 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 GCKP35557 465 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 TRMT44Q8IYL2 757 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 LPIN2Q92539 896 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 SEPT8Q92599 483 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 IRAK4Q9NWZ3 460 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 BTG4Q9NY30 223 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 ZFYVE9O95405 1425 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 SPDYE2BA6NHP3 402 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 SPDYE6P0CI01 402 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 EAPPQ56P03 285 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 KRT40Q6A162 431 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 SMYD2Q9NRG4 433 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 CCDC87Q9NVE4 849 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms