RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CAMTA2O94983 1202 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 KRT31Q15323 416 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 ENAHQ8N8S7 591 aaPredicted RBP17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 CEP120Q8N960 986 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 CTCFLQ8NI51 663 aaPredicted RBP17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 ESR2Q92731 530 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 GSDMAQ96QA5 445 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 VIPAS39Q9H9C1 493 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 MYH6P13533 1939 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 RNF225M0QZC1 329 aaPredicted RBP17.95■□□□□ 0.46
CHMP1A-201ENST00000397901 LIG3P49916 1009 aa17.95■□□□□ 0.46
CHMP1A-201ENST00000397901 ERVK-24P63145 666 aa17.95■□□□□ 0.46
CHMP1A-201ENST00000397901 RRAGBQ5VZM2 374 aa17.95■□□□□ 0.46
CHMP1A-201ENST00000397901 ABCF2Q9UG63 623 aa17.95■□□□□ 0.46
CHMP1A-201ENST00000397901 RTL9Q8NET4 1388 aa17.95■□□□□ 0.46
CHMP1A-201ENST00000397901 A0A0G2JS52 829 aa17.95■□□□□ 0.46
CHMP1A-201ENST00000397901 NUTM2BA6NNL0 878 aaPredicted RBP17.95■□□□□ 0.46
CHMP1A-201ENST00000397901 NUTM2EB1AL46 878 aaPredicted RBP17.95■□□□□ 0.46
CHMP1A-201ENST00000397901 AARSP49588 968 aaKnown RBP eCLIP17.95■□□□□ 0.467e-7■■■■■ 54
CHMP1A-201ENST00000397901 RCAN1P53805 252 aa17.95■□□□□ 0.46
CHMP1A-201ENST00000397901 VSNL1P62760 191 aa17.95■□□□□ 0.46
CHMP1A-201ENST00000397901 FERMT2Q96AC1 680 aa17.95■□□□□ 0.46
CHMP1A-201ENST00000397901 TAB2Q9NYJ8 693 aa17.95■□□□□ 0.46
CHMP1A-201ENST00000397901 XDHP47989 1333 aa17.94■□□□□ 0.46
CHMP1A-201ENST00000397901 DOCK2Q92608 1830 aa17.94■□□□□ 0.46
CHMP1A-201ENST00000397901 SETQ01105 290 aaPredicted RBP17.94■□□□□ 0.46
CHMP1A-201ENST00000397901 PTGDRQ13258 359 aa17.94■□□□□ 0.46
CHMP1A-201ENST00000397901 TTC38Q5R3I4 469 aa17.94■□□□□ 0.46
CHMP1A-201ENST00000397901 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
CHMP1A-201ENST00000397901 NUP88Q99567 741 aaPredicted RBP17.94■□□□□ 0.46
CHMP1A-201ENST00000397901 FUT2Q10981 343 aa17.94■□□□□ 0.46
CHMP1A-201ENST00000397901 IFIT1BQ5T764 474 aaKnown RBP17.94■□□□□ 0.46
CHMP1A-201ENST00000397901 KCNV1Q6PIU1 500 aa17.94■□□□□ 0.46
CHMP1A-201ENST00000397901 A1CFQ9NQ94 594 aaKnown RBP17.94■□□□□ 0.46
CHMP1A-201ENST00000397901 TTF2Q9UNY4 1162 aaKnown RBP17.94■□□□□ 0.46
CHMP1A-201ENST00000397901 LRRIQ3A6PVS8 624 aaPredicted RBP17.93■□□□□ 0.46
CHMP1A-201ENST00000397901 SEMA3EO15041 775 aa17.93■□□□□ 0.46
CHMP1A-201ENST00000397901 CATIPQ7Z7H3 387 aa17.93■□□□□ 0.46
CHMP1A-201ENST00000397901 ZSCAN10Q96SZ4 725 aaPredicted RBP17.93■□□□□ 0.46
CHMP1A-201ENST00000397901 NAPGQ99747 312 aaPredicted RBP17.93■□□□□ 0.46
CHMP1A-201ENST00000397901 SLF1Q9BQI6 1058 aa17.93■□□□□ 0.46
CHMP1A-201ENST00000397901 MTA3Q9BTC8 594 aa17.93■□□□□ 0.46
CHMP1A-201ENST00000397901 ABHD10Q9NUJ1 306 aa17.93■□□□□ 0.46
CHMP1A-201ENST00000397901 MAPK8IP1Q9UQF2 711 aa17.93■□□□□ 0.46
CHMP1A-201ENST00000397901 COL5A3P25940 1745 aaPredicted RBP17.93■□□□□ 0.46
CHMP1A-201ENST00000397901 PRPF3O43395 683 aaKnown RBP17.93■□□□□ 0.46
CHMP1A-201ENST00000397901 PRPF6O94906 941 aaKnown RBP17.93■□□□□ 0.46
CHMP1A-201ENST00000397901 CCDC51Q96ER9 411 aa17.93■□□□□ 0.46
CHMP1A-201ENST00000397901 FAM169AQ9Y6X4 670 aa17.93■□□□□ 0.46
CHMP1A-201ENST00000397901 MYH8P13535 1937 aa17.92■□□□□ 0.46
CHMP1A-201ENST00000397901 EBAG9O00559 213 aa17.92■□□□□ 0.46
CHMP1A-201ENST00000397901 SHOX2O60902 331 aaPredicted RBP17.92■□□□□ 0.46
CHMP1A-201ENST00000397901 TMTC1Q8IUR5 882 aa17.92■□□□□ 0.46
CHMP1A-201ENST00000397901 LAMB2P55268 1798 aa17.92■□□□□ 0.46
CHMP1A-201ENST00000397901 ITIH6Q6UXX5 1313 aa17.92■□□□□ 0.46
CHMP1A-201ENST00000397901 MAGEB6P1A0A0J9YX57 407 aa17.92■□□□□ 0.46
CHMP1A-201ENST00000397901 SYF2O95926 243 aaKnown RBP17.92■□□□□ 0.46
CHMP1A-201ENST00000397901 ARHGAP25P42331 645 aa17.92■□□□□ 0.46
CHMP1A-201ENST00000397901 COPB1P53618 953 aaKnown RBP17.92■□□□□ 0.46
CHMP1A-201ENST00000397901 PARP10Q53GL7 1025 aa17.92■□□□□ 0.46
CHMP1A-201ENST00000397901 CNPY4Q8N129 248 aa17.92■□□□□ 0.46
CHMP1A-201ENST00000397901 BAZ2BQ9UIF8 2168 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 CTAGE15A4D2H0 777 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 CTAGE8P0CG41 777 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 CTAGE6Q86UF2 777 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 CTAGE4Q8IX94 777 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 MTRQ99707 1265 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 LIMA1Q9UHB6 759 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 BCORQ6W2J9 1755 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 CCDC189A1A4V9 331 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 KCNQ2O43526 872 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 NTSR2O95665 410 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 BMP15O95972 392 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 MCM7P33993 719 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 KRT9P35527 623 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 DYNLL1P63167 89 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 PAK1Q13153 545 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 NPY5RQ15761 445 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 FBXW10Q5XX13 1052 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 NCAPH2Q6IBW4 605 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 WDR93Q6P2C0 686 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 CYP26C1Q6V0L0 522 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 PIK3AP1Q6ZUJ8 805 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 NOA1Q8NC60 698 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 NELFBQ8WX92 580 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 TNFRSF25Q93038 417 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 TRIM10Q9UDY6 481 aa17.91■□□□□ 0.46
CHMP1A-201ENST00000397901 KCNJ18B7U540 433 aa17.9■□□□□ 0.46
CHMP1A-201ENST00000397901 C21orf2O43822 256 aa17.9■□□□□ 0.46
CHMP1A-201ENST00000397901 FECHP22830 423 aa17.9■□□□□ 0.46
CHMP1A-201ENST00000397901 ATP2C1P98194 919 aaPredicted RBP17.9■□□□□ 0.46
CHMP1A-201ENST00000397901 KCNJ12Q14500 433 aa17.9■□□□□ 0.46
CHMP1A-201ENST00000397901 SMARCC1Q92922 1105 aaPredicted RBP17.9■□□□□ 0.46
CHMP1A-201ENST00000397901 ZNF831Q5JPB2 1677 aa17.9■□□□□ 0.46
CHMP1A-201ENST00000397901 MYH2Q9UKX2 1941 aa17.9■□□□□ 0.46
CHMP1A-201ENST00000397901 IGHMBP2P38935 993 aaKnown RBP17.9■□□□□ 0.46
CHMP1A-201ENST00000397901 CCT5P48643 541 aa17.9■□□□□ 0.46
CHMP1A-201ENST00000397901 PIP4K2BP78356 416 aa17.9■□□□□ 0.46
CHMP1A-201ENST00000397901 PPP2R5BQ15173 497 aa17.9■□□□□ 0.46
CHMP1A-201ENST00000397901 GBP6Q6ZN66 633 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms