RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PICK1Q9NRD5 415 aa22.45■■□□□ 1.18
PDLIM2-205ENST00000397761 LMBRD1Q9NUN5 540 aa22.45■■□□□ 1.18
PDLIM2-205ENST00000397761 PNMA6FA0A0J9YX94 578 aa22.44■■□□□ 1.18
PDLIM2-205ENST00000397761 BTBD18B2RXH4 712 aa22.44■■□□□ 1.18
PDLIM2-205ENST00000397761 NF2P35240 595 aa22.44■■□□□ 1.18
PDLIM2-205ENST00000397761 SLC16A2P36021 539 aa22.44■■□□□ 1.18
PDLIM2-205ENST00000397761 MAP3K9P80192 1104 aa22.44■■□□□ 1.18
PDLIM2-205ENST00000397761 GALNT17Q6IS24 598 aa22.44■■□□□ 1.18
PDLIM2-205ENST00000397761 SPICE1Q8N0Z3 855 aa22.44■■□□□ 1.18
PDLIM2-205ENST00000397761 DAGLBQ8NCG7 672 aa22.44■■□□□ 1.18
PDLIM2-205ENST00000397761 CCDC148Q8NFR7 591 aa22.44■■□□□ 1.18
PDLIM2-205ENST00000397761 GPKOWQ92917 476 aaPredicted RBP eCLIP22.44■■□□□ 1.18
PDLIM2-205ENST00000397761 AS3MTQ9HBK9 375 aa22.44■■□□□ 1.18
PDLIM2-205ENST00000397761 LOC285556D6RIA3 1793 aa22.44■■□□□ 1.18
PDLIM2-205ENST00000397761 TRPM7Q96QT4 1865 aa22.44■■□□□ 1.18
PDLIM2-205ENST00000397761 USP17L10C9JJH3 530 aa22.43■■□□□ 1.18
PDLIM2-205ENST00000397761 TMEM232C9JQI7 657 aa22.43■■□□□ 1.18
PDLIM2-205ENST00000397761 ZBTB5O15062 677 aa22.43■■□□□ 1.18
PDLIM2-205ENST00000397761 RAD21O60216 631 aa22.43■■□□□ 1.18
PDLIM2-205ENST00000397761 CALML3P27482 149 aa22.43■■□□□ 1.18
PDLIM2-205ENST00000397761 MYSM1Q5VVJ2 828 aa22.43■■□□□ 1.18
PDLIM2-205ENST00000397761 NOSTRINQ8IVI9 506 aa22.43■■□□□ 1.18
PDLIM2-205ENST00000397761 TNFRSF25Q93038 417 aa22.43■■□□□ 1.18
PDLIM2-205ENST00000397761 FEZ1Q99689 392 aa22.43■■□□□ 1.18
PDLIM2-205ENST00000397761 VAT1LQ9HCJ6 419 aa22.43■■□□□ 1.18
PDLIM2-205ENST00000397761 SNCAIPQ9Y6H5 919 aa22.43■■□□□ 1.18
PDLIM2-205ENST00000397761 ELP1O95163 1332 aa22.43■■□□□ 1.18
PDLIM2-205ENST00000397761 ESYT2A0FGR8 921 aa22.42■■□□□ 1.18
PDLIM2-205ENST00000397761 POTEIP0CG38 1075 aa22.42■■□□□ 1.18
PDLIM2-205ENST00000397761 POTEJP0CG39 1038 aa22.42■■□□□ 1.18
PDLIM2-205ENST00000397761 KRT2P35908 639 aa22.42■■□□□ 1.18
PDLIM2-205ENST00000397761 HOMER1Q86YM7 354 aa22.42■■□□□ 1.18
PDLIM2-205ENST00000397761 ZNF280CQ8ND82 737 aa22.42■■□□□ 1.18
PDLIM2-205ENST00000397761 OXER1Q8TDS5 423 aa22.42■■□□□ 1.18
PDLIM2-205ENST00000397761 CCDC12Q8WUD4 166 aaPredicted RBP22.42■■□□□ 1.18
PDLIM2-205ENST00000397761 ZNF396Q96N95 335 aaPredicted RBP22.42■■□□□ 1.18
PDLIM2-205ENST00000397761 SCAND2PQ9GZW5 306 aaPredicted RBP22.42■■□□□ 1.18
PDLIM2-205ENST00000397761 ZMYND12Q9H0C1 365 aa22.42■■□□□ 1.18
PDLIM2-205ENST00000397761 NMRK2Q9NPI5 230 aa22.42■■□□□ 1.18
PDLIM2-205ENST00000397761 CFAP45Q9UL16 551 aa22.42■■□□□ 1.18
PDLIM2-205ENST00000397761 WDR46O15213 610 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 IREB2P48200 963 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 STAT2P52630 851 aa22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 USP14P54578 494 aa22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 BACE1P56817 501 aa22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 VGLL4Q14135 290 aa22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 FAM83BQ5T0W9 1011 aa22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 SYDE2Q5VT97 1194 aa22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 PPP1R18Q6NYC8 613 aa22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 HEATR3Q7Z4Q2 680 aa22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 C12orf42Q96LP6 360 aa22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 RRAGCQ9HB90 399 aa22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 M0R2N6 131 aa22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 PPP1R11O60927 126 aaPredicted RBP22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 NLRP5P59047 1200 aa22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 SPP2Q13103 211 aa22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 BRMS1Q9HCU9 246 aa22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 PCDHA4Q9UN74 947 aa22.41■■□□□ 1.18
PDLIM2-205ENST00000397761 COL11A1P12107 1806 aaPredicted RBP22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 C19orf81C9J6K1 198 aa22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 NR5A1Q13285 461 aa22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 MTMR2Q13614 643 aa22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 ZYXQ15942 572 aaKnown RBP22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 CSPP1Q1MSJ5 1256 aa22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 FAM160B2Q86V87 743 aa22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 LDHDQ86WU2 507 aa22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 CHURC1Q8WUH1 139 aa22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 USP28Q96RU2 1077 aa22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 GDPD2Q9HCC8 539 aa22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 EMILIN3Q9NT22 766 aa22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 POLR3EQ9NVU0 708 aa22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 FEM1BQ9UK73 627 aa22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 PRR12Q9ULL5 1215 aa22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 AFG3L2Q9Y4W6 797 aa22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 ZHX2Q9Y6X8 837 aa22.4■■□□□ 1.18
PDLIM2-205ENST00000397761 FIBPO43427 364 aa22.39■■□□□ 1.17
PDLIM2-205ENST00000397761 PRPF40AO75400 957 aaKnown RBP22.39■■□□□ 1.17
PDLIM2-205ENST00000397761 NCLP19338 710 aaKnown RBP22.39■■□□□ 1.17
PDLIM2-205ENST00000397761 GNL2Q13823 731 aaKnown RBP22.39■■□□□ 1.17
PDLIM2-205ENST00000397761 PRKG1Q13976 671 aa22.39■■□□□ 1.17
PDLIM2-205ENST00000397761 NBR1Q14596 966 aa22.39■■□□□ 1.17
PDLIM2-205ENST00000397761 CDC37Q16543 378 aaPredicted RBP22.39■■□□□ 1.17
PDLIM2-205ENST00000397761 QRICH1Q2TAL8 776 aa22.39■■□□□ 1.17
PDLIM2-205ENST00000397761 BLIDQ8IZY5 108 aa22.39■■□□□ 1.17
PDLIM2-205ENST00000397761 LEO1Q8WVC0 666 aaPredicted RBP22.39■■□□□ 1.17
PDLIM2-205ENST00000397761 RTEL1Q9NZ71 1219 aa22.39■■□□□ 1.17
PDLIM2-205ENST00000397761 TFIP11Q9UBB9 837 aaKnown RBP22.39■■□□□ 1.17
PDLIM2-205ENST00000397761 RCOR1Q9UKL0 485 aa22.39■■□□□ 1.17
PDLIM2-205ENST00000397761 CLEC11AQ9Y240 323 aa22.39■■□□□ 1.17
PDLIM2-205ENST00000397761 NAPAP54920 295 aa22.38■■□□□ 1.17
PDLIM2-205ENST00000397761 MAP1SQ66K74 1059 aaPredicted RBP22.38■■□□□ 1.17
PDLIM2-205ENST00000397761 ANKRD13AQ8IZ07 590 aa22.38■■□□□ 1.17
PDLIM2-205ENST00000397761 ISY1Q9ULR0 285 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-205ENST00000397761 CSADQ9Y600 493 aa22.38■■□□□ 1.17
PDLIM2-205ENST00000397761 UNCXA6NJT0 531 aa22.37■■□□□ 1.17
PDLIM2-205ENST00000397761 VCAM1P19320 739 aa22.37■■□□□ 1.17
PDLIM2-205ENST00000397761 NASPP49321 788 aaPredicted RBP22.37■■□□□ 1.17
PDLIM2-205ENST00000397761 RILPL1Q5EBL4 403 aa22.37■■□□□ 1.17
PDLIM2-205ENST00000397761 SH3D19Q5HYK7 790 aa22.37■■□□□ 1.17
PDLIM2-205ENST00000397761 MYH7BA7E2Y1 1941 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms