RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TTBK2Q6IQ55 1244 aa24.82■■□□□ 1.56
TSPAN4-206ENST00000397408 KCNB2Q92953 911 aa24.82■■□□□ 1.56
TSPAN4-206ENST00000397408 NEK1Q96PY6 1258 aa24.82■■□□□ 1.56
TSPAN4-206ENST00000397408 SENP2Q9HC62 589 aa24.82■■□□□ 1.56
TSPAN4-206ENST00000397408 ZNF214Q9UL59 606 aaPredicted RBP24.82■■□□□ 1.56
TSPAN4-206ENST00000397408 CTDP1Q9Y5B0 961 aaPredicted RBP24.82■■□□□ 1.56
TSPAN4-206ENST00000397408 ZBED4O75132 1171 aa24.81■■□□□ 1.56
TSPAN4-206ENST00000397408 GPR142Q7Z601 462 aa24.81■■□□□ 1.56
TSPAN4-206ENST00000397408 IGDCC4Q8TDY8 1250 aa24.81■■□□□ 1.56
TSPAN4-206ENST00000397408 SLC38A10Q9HBR0 1119 aa24.81■■□□□ 1.56
TSPAN4-206ENST00000397408 HPS5Q9UPZ3 1129 aa24.81■■□□□ 1.56
TSPAN4-206ENST00000397408 SLC16A2P36021 539 aa24.8■■□□□ 1.56
TSPAN4-206ENST00000397408 FLT3LGP49771 235 aa24.8■■□□□ 1.56
TSPAN4-206ENST00000397408 PLEKHH3Q7Z736 793 aa24.8■■□□□ 1.56
TSPAN4-206ENST00000397408 RAET1EQ8TD07 263 aa24.8■■□□□ 1.56
TSPAN4-206ENST00000397408 ABHD8Q96I13 439 aa24.8■■□□□ 1.56
TSPAN4-206ENST00000397408 USP26Q9BXU7 913 aa24.8■■□□□ 1.56
TSPAN4-206ENST00000397408 GPHNQ9NQX3 736 aaPredicted RBP24.8■■□□□ 1.56
TSPAN4-206ENST00000397408 PRR12Q9ULL5 1215 aa24.8■■□□□ 1.56
TSPAN4-206ENST00000397408 SNX14Q9Y5W7 946 aa24.8■■□□□ 1.56
TSPAN4-206ENST00000397408 GOLGA8HP0CJ92 632 aa24.79■■□□□ 1.56
TSPAN4-206ENST00000397408 ERCC3P19447 782 aa24.79■■□□□ 1.56
TSPAN4-206ENST00000397408 STAT3P40763 770 aa24.79■■□□□ 1.56
TSPAN4-206ENST00000397408 GPATCH4Q5T3I0 446 aaKnown RBP24.79■■□□□ 1.56
TSPAN4-206ENST00000397408 SHCBP1Q8NEM2 672 aa24.79■■□□□ 1.56
TSPAN4-206ENST00000397408 TMEM87BQ96K49 555 aa24.79■■□□□ 1.56
TSPAN4-206ENST00000397408 MTA3Q9BTC8 594 aa24.79■■□□□ 1.56
TSPAN4-206ENST00000397408 TEX13BQ9BXU2 312 aa24.79■■□□□ 1.56
TSPAN4-206ENST00000397408 LY9Q9HBG7 655 aa24.79■■□□□ 1.56
TSPAN4-206ENST00000397408 SH2B2O14492 632 aaPredicted RBP24.78■■□□□ 1.56
TSPAN4-206ENST00000397408 SYDE2Q5VT97 1194 aa24.78■■□□□ 1.56
TSPAN4-206ENST00000397408 BTNL9Q6UXG8 535 aa24.78■■□□□ 1.56
TSPAN4-206ENST00000397408 NCAPG2Q86XI2 1143 aa24.78■■□□□ 1.56
TSPAN4-206ENST00000397408 CPXCR1Q8N123 301 aa24.78■■□□□ 1.56
TSPAN4-206ENST00000397408 LRRC2Q9BYS8 371 aa24.78■■□□□ 1.56
TSPAN4-206ENST00000397408 RAVER2Q9HCJ3 691 aaKnown RBP24.78■■□□□ 1.56
TSPAN4-206ENST00000397408 FDX1P10109 184 aa24.78■■□□□ 1.56
TSPAN4-206ENST00000397408 ASPRV1Q53RT3 343 aa24.78■■□□□ 1.56
TSPAN4-206ENST00000397408 SNRNP48Q6IEG0 339 aaKnown RBP24.78■■□□□ 1.56
TSPAN4-206ENST00000397408 RIOX2Q8IUF8 465 aa24.78■■□□□ 1.56
TSPAN4-206ENST00000397408 SOCS4Q8WXH5 440 aa24.78■■□□□ 1.56
TSPAN4-206ENST00000397408 JAKMIP1Q96N16 626 aaKnown RBP24.78■■□□□ 1.56
TSPAN4-206ENST00000397408 IVNS1ABPQ9Y6Y0 642 aa24.78■■□□□ 1.56
TSPAN4-206ENST00000397408 PLXNB2O15031 1838 aa24.77■■□□□ 1.56
TSPAN4-206ENST00000397408 SLC25A27O95847 323 aa24.77■■□□□ 1.56
TSPAN4-206ENST00000397408 PARP1P09874 1014 aaKnown RBP24.77■■□□□ 1.56
TSPAN4-206ENST00000397408 SNAP25P60880 206 aa24.77■■□□□ 1.56
TSPAN4-206ENST00000397408 DHX32Q7L7V1 743 aaKnown RBP24.77■■□□□ 1.56
TSPAN4-206ENST00000397408 TCEANC2Q96MN5 208 aa24.77■■□□□ 1.56
TSPAN4-206ENST00000397408 NUDT12Q9BQG2 462 aa24.77■■□□□ 1.56
TSPAN4-206ENST00000397408 MROH8Q9H579 483 aa24.77■■□□□ 1.56
TSPAN4-206ENST00000397408 GJD2Q9UKL4 321 aa24.77■■□□□ 1.56
TSPAN4-206ENST00000397408 ATP2A1O14983 1001 aa24.76■■□□□ 1.55
TSPAN4-206ENST00000397408 COPB2P35606 906 aa24.76■■□□□ 1.55
TSPAN4-206ENST00000397408 SLC4A3P48751 1232 aa24.76■■□□□ 1.55
TSPAN4-206ENST00000397408 OAZ1P54368 228 aa24.76■■□□□ 1.55
TSPAN4-206ENST00000397408 IRF5Q13568 498 aa24.76■■□□□ 1.55
TSPAN4-206ENST00000397408 SLC9C1Q4G0N8 1177 aa24.76■■□□□ 1.55
TSPAN4-206ENST00000397408 NFXL1Q6ZNB6 911 aa24.76■■□□□ 1.55
TSPAN4-206ENST00000397408 CATIPQ7Z7H3 387 aa24.76■■□□□ 1.55
TSPAN4-206ENST00000397408 CPVLQ9H3G5 476 aa24.76■■□□□ 1.55
TSPAN4-206ENST00000397408 WDR19Q8NEZ3 1342 aa24.75■■□□□ 1.55
TSPAN4-206ENST00000397408 HMGB1P09429 215 aaKnown RBP24.75■■□□□ 1.55
TSPAN4-206ENST00000397408 PTPREP23469 700 aa24.75■■□□□ 1.55
TSPAN4-206ENST00000397408 MORN1Q5T089 497 aa24.75■■□□□ 1.55
TSPAN4-206ENST00000397408 CCDC174Q6PII3 467 aa24.75■■□□□ 1.55
TSPAN4-206ENST00000397408 UBA5Q9GZZ9 404 aa24.75■■□□□ 1.55
TSPAN4-206ENST00000397408 CPA1P15085 419 aa24.74■■□□□ 1.55
TSPAN4-206ENST00000397408 EXOSC10Q01780 885 aaKnown RBP24.74■■□□□ 1.55
TSPAN4-206ENST00000397408 GRB14Q14449 540 aa24.74■■□□□ 1.55
TSPAN4-206ENST00000397408 ZNF654Q8IZM8 581 aa24.74■■□□□ 1.55
TSPAN4-206ENST00000397408 SH3TC2Q8TF17 1288 aa24.74■■□□□ 1.55
TSPAN4-206ENST00000397408 RANBP17Q9H2T7 1088 aaKnown RBP24.74■■□□□ 1.55
TSPAN4-206ENST00000397408 RIPK3Q9Y572 518 aa24.74■■□□□ 1.55
TSPAN4-206ENST00000397408 ZNF536O15090 1300 aa24.74■■□□□ 1.55
TSPAN4-206ENST00000397408 CCDC69A6NI79 296 aa24.73■■□□□ 1.55
TSPAN4-206ENST00000397408 SLC15A5A6NIM6 579 aa24.73■■□□□ 1.55
TSPAN4-206ENST00000397408 EIF5BO60841 1220 aaKnown RBP24.73■■□□□ 1.55
TSPAN4-206ENST00000397408 CYP2B6P20813 491 aa24.73■■□□□ 1.55
TSPAN4-206ENST00000397408 GRK4P32298 578 aa24.73■■□□□ 1.55
TSPAN4-206ENST00000397408 LIFRP42702 1097 aa24.73■■□□□ 1.55
TSPAN4-206ENST00000397408 TROAPQ12815 778 aa24.73■■□□□ 1.55
TSPAN4-206ENST00000397408 GRM4Q14833 912 aa24.73■■□□□ 1.55
TSPAN4-206ENST00000397408 BLOC1S2Q6QNY1 142 aa24.73■■□□□ 1.55
TSPAN4-206ENST00000397408 TMTC2Q8N394 836 aa24.73■■□□□ 1.55
TSPAN4-206ENST00000397408 STAG2Q8N3U4 1231 aa24.73■■□□□ 1.55
TSPAN4-206ENST00000397408 SLAIN1Q8ND83 568 aa24.73■■□□□ 1.55
TSPAN4-206ENST00000397408 MYL10Q9BUA6 226 aa24.73■■□□□ 1.55
TSPAN4-206ENST00000397408 CENPFP49454 3210 aa24.73■■□□□ 1.55
TSPAN4-206ENST00000397408 ZNF236Q9UL36 1845 aa24.72■■□□□ 1.55
TSPAN4-206ENST00000397408 ADCY3O60266 1144 aa24.72■■□□□ 1.55
TSPAN4-206ENST00000397408 DDAH1O94760 285 aa24.72■■□□□ 1.55
TSPAN4-206ENST00000397408 RGS2P41220 211 aa24.72■■□□□ 1.55
TSPAN4-206ENST00000397408 MAP2K5Q13163 448 aa24.72■■□□□ 1.55
TSPAN4-206ENST00000397408 C8orf34Q49A92 452 aa24.72■■□□□ 1.55
TSPAN4-206ENST00000397408 NUP133Q8WUM0 1156 aa24.72■■□□□ 1.55
TSPAN4-206ENST00000397408 USP6NLQ92738 828 aa24.72■■□□□ 1.55
TSPAN4-206ENST00000397408 AGBL1Q96MI9 1066 aa24.72■■□□□ 1.55
TSPAN4-206ENST00000397408 MAD2L2Q9UI95 211 aa24.72■■□□□ 1.55
TSPAN4-206ENST00000397408 STRNO43815 780 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms