RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 RASEFQ8IZ41 740 aa24.49■■□□□ 1.51
SEC13-207ENST00000397105 SOCS4Q8WXH5 440 aa24.49■■□□□ 1.51
SEC13-207ENST00000397105 NUDT12Q9BQG2 462 aa24.49■■□□□ 1.51
SEC13-207ENST00000397105 GPCPD1Q9NPB8 672 aa24.49■■□□□ 1.51
SEC13-207ENST00000397105 GJD2Q9UKL4 321 aa24.49■■□□□ 1.51
SEC13-207ENST00000397105 ZNF214Q9UL59 606 aaPredicted RBP24.49■■□□□ 1.51
SEC13-207ENST00000397105 IVNS1ABPQ9Y6Y0 642 aa24.49■■□□□ 1.51
SEC13-207ENST00000397105 FRMPD2Q68DX3 1309 aaPredicted RBP24.49■■□□□ 1.51
SEC13-207ENST00000397105 ERCC3P19447 782 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 COPB2P35606 906 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 OAZ1P54368 228 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 ANTXR2P58335 489 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 ZNF543Q08ER8 600 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 IRF5Q13568 498 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 SLC9C1Q4G0N8 1177 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 GPATCH4Q5T3I0 446 aaKnown RBP24.48■■□□□ 1.51
SEC13-207ENST00000397105 BTNL9Q6UXG8 535 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 NBPF11Q86T75 865 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 NCAPG2Q86XI2 1143 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 RIOX2Q8IUF8 465 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 IGDCC4Q8TDY8 1250 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 KCNB2Q92953 911 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 NEK1Q96PY6 1258 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 TEX13BQ9BXU2 312 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 PRR12Q9ULL5 1215 aa24.48■■□□□ 1.51
SEC13-207ENST00000397105 RLFQ13129 1914 aa24.47■■□□□ 1.51
SEC13-207ENST00000397105 ATP2A1O14983 1001 aa24.47■■□□□ 1.51
SEC13-207ENST00000397105 STRNO43815 780 aa24.47■■□□□ 1.51
SEC13-207ENST00000397105 EIF5BO60841 1220 aaKnown RBP24.47■■□□□ 1.51
SEC13-207ENST00000397105 TTBK2Q6IQ55 1244 aa24.47■■□□□ 1.51
SEC13-207ENST00000397105 CPXCR1Q8N123 301 aa24.47■■□□□ 1.51
SEC13-207ENST00000397105 SLC15A5A6NIM6 579 aa24.46■■□□□ 1.51
SEC13-207ENST00000397105 PTPREP23469 700 aa24.46■■□□□ 1.51
SEC13-207ENST00000397105 SLC16A2P36021 539 aa24.46■■□□□ 1.51
SEC13-207ENST00000397105 SYDE2Q5VT97 1194 aa24.46■■□□□ 1.51
SEC13-207ENST00000397105 TMTC2Q8N394 836 aa24.46■■□□□ 1.51
SEC13-207ENST00000397105 TMEM87BQ96K49 555 aa24.46■■□□□ 1.51
SEC13-207ENST00000397105 USP26Q9BXU7 913 aa24.46■■□□□ 1.51
SEC13-207ENST00000397105 HMGB1P09429 215 aaKnown RBP24.45■■□□□ 1.5
SEC13-207ENST00000397105 PARP1P09874 1014 aaKnown RBP24.45■■□□□ 1.5
SEC13-207ENST00000397105 GOLGA8HP0CJ92 632 aa24.45■■□□□ 1.5
SEC13-207ENST00000397105 GRK4P32298 578 aa24.45■■□□□ 1.5
SEC13-207ENST00000397105 ASPRV1Q53RT3 343 aa24.45■■□□□ 1.5
SEC13-207ENST00000397105 MORN1Q5T089 497 aa24.45■■□□□ 1.5
SEC13-207ENST00000397105 SNRNP48Q6IEG0 339 aaKnown RBP24.45■■□□□ 1.5
SEC13-207ENST00000397105 SLAIN1Q8ND83 568 aa24.45■■□□□ 1.5
SEC13-207ENST00000397105 PXYLP1Q8TE99 480 aa24.45■■□□□ 1.5
SEC13-207ENST00000397105 ARMC5Q96C12 935 aa24.45■■□□□ 1.5
SEC13-207ENST00000397105 RAVER2Q9HCJ3 691 aaKnown RBP24.45■■□□□ 1.5
SEC13-207ENST00000397105 ZSWIM8A7E2V4 1837 aa24.45■■□□□ 1.5
SEC13-207ENST00000397105 CCDC85CA6NKD9 419 aa24.44■■□□□ 1.5
SEC13-207ENST00000397105 ADCY3O60266 1144 aa24.44■■□□□ 1.5
SEC13-207ENST00000397105 XRCC5P13010 732 aaKnown RBP24.44■■□□□ 1.5
SEC13-207ENST00000397105 RGS2P41220 211 aa24.44■■□□□ 1.5
SEC13-207ENST00000397105 DHX32Q7L7V1 743 aaKnown RBP24.44■■□□□ 1.5
SEC13-207ENST00000397105 CATIPQ7Z7H3 387 aa24.44■■□□□ 1.5
SEC13-207ENST00000397105 SENP2Q9HC62 589 aa24.44■■□□□ 1.5
SEC13-207ENST00000397105 CENPFP49454 3210 aa24.43■■□□□ 1.5
SEC13-207ENST00000397105 WDR19Q8NEZ3 1342 aa24.43■■□□□ 1.5
SEC13-207ENST00000397105 SH2B2O14492 632 aaPredicted RBP24.43■■□□□ 1.5
SEC13-207ENST00000397105 FCER1AP12319 257 aa24.43■■□□□ 1.5
SEC13-207ENST00000397105 CYP2B6P20813 491 aa24.43■■□□□ 1.5
SEC13-207ENST00000397105 SLC4A3P48751 1232 aa24.43■■□□□ 1.5
SEC13-207ENST00000397105 GRB14Q14449 540 aa24.43■■□□□ 1.5
SEC13-207ENST00000397105 ADCK5Q3MIX3 580 aa24.43■■□□□ 1.5
SEC13-207ENST00000397105 ABRAQ8N0Z2 381 aa24.43■■□□□ 1.5
SEC13-207ENST00000397105 SH3TC2Q8TF17 1288 aa24.43■■□□□ 1.5
SEC13-207ENST00000397105 USP6NLQ92738 828 aa24.43■■□□□ 1.5
SEC13-207ENST00000397105 LY9Q9HBG7 655 aa24.43■■□□□ 1.5
SEC13-207ENST00000397105 SNX14Q9Y5W7 946 aa24.43■■□□□ 1.5
SEC13-207ENST00000397105 A0A0G2JMZ2 1700 aa24.42■■□□□ 1.5
SEC13-207ENST00000397105 LIFRP42702 1097 aa24.42■■□□□ 1.5
SEC13-207ENST00000397105 MAP2K5Q13163 448 aa24.42■■□□□ 1.5
SEC13-207ENST00000397105 CCDC174Q6PII3 467 aa24.42■■□□□ 1.5
SEC13-207ENST00000397105 NFXL1Q6ZNB6 911 aa24.42■■□□□ 1.5
SEC13-207ENST00000397105 RANBP17Q9H2T7 1088 aaKnown RBP24.42■■□□□ 1.5
SEC13-207ENST00000397105 BIN2Q9UBW5 565 aaPredicted RBP24.42■■□□□ 1.5
SEC13-207ENST00000397105 SNAP25P60880 206 aa24.41■■□□□ 1.5
SEC13-207ENST00000397105 EXOSC10Q01780 885 aaKnown RBP24.41■■□□□ 1.5
SEC13-207ENST00000397105 COL9A3Q14050 684 aaPredicted RBP24.41■■□□□ 1.5
SEC13-207ENST00000397105 KCTD2Q14681 263 aa24.41■■□□□ 1.5
SEC13-207ENST00000397105 TRMT44Q8IYL2 757 aaKnown RBP24.41■■□□□ 1.5
SEC13-207ENST00000397105 JAKMIP1Q96N16 626 aaKnown RBP24.41■■□□□ 1.5
SEC13-207ENST00000397105 MMP19Q99542 508 aa24.41■■□□□ 1.5
SEC13-207ENST00000397105 UBA5Q9GZZ9 404 aa24.41■■□□□ 1.5
SEC13-207ENST00000397105 GPHNQ9NQX3 736 aaPredicted RBP24.41■■□□□ 1.5
SEC13-207ENST00000397105 PNMA2Q9UL42 364 aa24.41■■□□□ 1.5
SEC13-207ENST00000397105 RIPK3Q9Y572 518 aa24.41■■□□□ 1.5
SEC13-207ENST00000397105 MGAMO43451 1857 aa24.41■■□□□ 1.5
SEC13-207ENST00000397105 ZNF536O15090 1300 aa24.4■■□□□ 1.5
SEC13-207ENST00000397105 CCDC69A6NI79 296 aa24.4■■□□□ 1.5
SEC13-207ENST00000397105 ELNP15502 786 aa24.4■■□□□ 1.5
SEC13-207ENST00000397105 PSMA5P28066 241 aa24.4■■□□□ 1.5
SEC13-207ENST00000397105 ADORA2AP29274 412 aa24.4■■□□□ 1.5
SEC13-207ENST00000397105 TROAPQ12815 778 aa24.4■■□□□ 1.5
SEC13-207ENST00000397105 DPP9Q86TI2 863 aa24.4■■□□□ 1.5
SEC13-207ENST00000397105 CHST13Q8NET6 341 aa24.4■■□□□ 1.5
SEC13-207ENST00000397105 ZNF333Q96JL9 665 aa24.4■■□□□ 1.5
SEC13-207ENST00000397105 AGBL1Q96MI9 1066 aa24.4■■□□□ 1.5
SEC13-207ENST00000397105 APBA2Q99767 749 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms