RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 TMEM232C9JQI7 657 aa15.66■□□□□ 0.1
MCF2L-209ENST00000397036 FOSBP53539 338 aa15.66■□□□□ 0.1
MCF2L-209ENST00000397036 KIAA1755Q5JYT7 1200 aa15.66■□□□□ 0.1
MCF2L-209ENST00000397036 SYDE2Q5VT97 1194 aa15.66■□□□□ 0.1
MCF2L-209ENST00000397036 MYSM1Q5VVJ2 828 aa15.66■□□□□ 0.1
MCF2L-209ENST00000397036 WWC2Q6AWC2 1192 aa15.66■□□□□ 0.1
MCF2L-209ENST00000397036 NOSTRINQ8IVI9 506 aa15.66■□□□□ 0.1
MCF2L-209ENST00000397036 ANKRD13AQ8IZ07 590 aa15.66■□□□□ 0.1
MCF2L-209ENST00000397036 GLIS2Q9BZE0 524 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-209ENST00000397036 RRAGCQ9HB90 399 aa15.66■□□□□ 0.1
MCF2L-209ENST00000397036 VAT1LQ9HCJ6 419 aa15.66■□□□□ 0.1
MCF2L-209ENST00000397036 LMBRD1Q9NUN5 540 aa15.66■□□□□ 0.1
MCF2L-209ENST00000397036 KCNJ14Q9UNX9 436 aa15.66■□□□□ 0.1
MCF2L-209ENST00000397036 ELP1O95163 1332 aa15.66■□□□□ 0.1
MCF2L-209ENST00000397036 BTBD18B2RXH4 712 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 KIF28PB7ZC32 967 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 GNA11P29992 359 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 KRT2P35908 639 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 STAT2P52630 851 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 NLRP5P59047 1200 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 SPP2Q13103 211 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 SKOR2Q2VWA4 1001 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-209ENST00000397036 SH3D19Q5HYK7 790 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 ARMC9Q7Z3E5 817 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 TNFRSF25Q93038 417 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 FEZ1Q99689 392 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 GLT8D2Q9H1C3 349 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 CPVLQ9H3G5 476 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 RCOR1Q9UKL0 485 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 AFG3L2Q9Y4W6 797 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 CSADQ9Y600 493 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 SNCAIPQ9Y6H5 919 aa15.65■□□□□ 0.1
MCF2L-209ENST00000397036 M0R2N6 131 aa15.64■□□□□ 0.09
MCF2L-209ENST00000397036 FDX1P10109 184 aa15.64■□□□□ 0.09
MCF2L-209ENST00000397036 SLC16A2P36021 539 aa15.64■□□□□ 0.09
MCF2L-209ENST00000397036 FKBP1BP68106 108 aa15.64■□□□□ 0.09
MCF2L-209ENST00000397036 VGLL4Q14135 290 aa15.64■□□□□ 0.09
MCF2L-209ENST00000397036 LDLRAD1Q5T700 205 aa15.64■□□□□ 0.09
MCF2L-209ENST00000397036 HEATR3Q7Z4Q2 680 aa15.64■□□□□ 0.09
MCF2L-209ENST00000397036 EMILIN3Q9NT22 766 aa15.64■□□□□ 0.09
MCF2L-209ENST00000397036 RTEL1Q9NZ71 1219 aa15.64■□□□□ 0.09
MCF2L-209ENST00000397036 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-209ENST00000397036 PCDHA4Q9UN74 947 aa15.64■□□□□ 0.09
MCF2L-209ENST00000397036 CLEC11AQ9Y240 323 aa15.64■□□□□ 0.09
MCF2L-209ENST00000397036 ZHX2Q9Y6X8 837 aa15.64■□□□□ 0.09
MCF2L-209ENST00000397036 MORC2Q9Y6X9 1032 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-209ENST00000397036 RAD21O60216 631 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 PPATQ06203 517 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 GNL2Q13823 731 aaKnown RBP15.63■□□□□ 0.09
MCF2L-209ENST00000397036 RILPL1Q5EBL4 403 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 FAM83BQ5T0W9 1011 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 TYW1BQ6NUM6 668 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 FAM173BQ6P4H8 233 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 CCDC84Q86UT8 332 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-209ENST00000397036 HOMER1Q86YM7 354 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 BLIDQ8IZY5 108 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 SPICE1Q8N0Z3 855 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 BICD2Q8TD16 824 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 NUP88Q99567 741 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-209ENST00000397036 C6orf50Q9HD87 102 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 POLR3EQ9NVU0 708 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 PRR12Q9ULL5 1215 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 CXCL11O14625 94 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 YEATS4O95619 227 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 TRAPPC10P48553 1259 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 NASPP49321 788 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-209ENST00000397036 NAPAP54920 295 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 QRICH1Q2TAL8 776 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 DLK2Q6UY11 383 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 ERO1BQ86YB8 467 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 PRPF38AQ8NAV1 312 aaKnown RBP15.63■□□□□ 0.09
MCF2L-209ENST00000397036 PIBF1Q8WXW3 757 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 GPKOWQ92917 476 aaPredicted RBP eCLIP15.63■□□□□ 0.09
MCF2L-209ENST00000397036 PNMA2Q9UL42 364 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 CNPY2Q9Y2B0 182 aa15.63■□□□□ 0.09
MCF2L-209ENST00000397036 MYH6P13533 1939 aa15.62■□□□□ 0.09
MCF2L-209ENST00000397036 PRPF40AO75400 957 aaKnown RBP15.62■□□□□ 0.09
MCF2L-209ENST00000397036 POTEIP0CG38 1075 aa15.62■□□□□ 0.09
MCF2L-209ENST00000397036 POTEJP0CG39 1038 aa15.62■□□□□ 0.09
MCF2L-209ENST00000397036 MTMR2Q13614 643 aa15.62■□□□□ 0.09
MCF2L-209ENST00000397036 CDC37Q16543 378 aaPredicted RBP15.62■□□□□ 0.09
MCF2L-209ENST00000397036 OXER1Q8TDS5 423 aa15.62■□□□□ 0.09
MCF2L-209ENST00000397036 CHAMP1Q96JM3 812 aa15.62■□□□□ 0.09
MCF2L-209ENST00000397036 USP28Q96RU2 1077 aa15.62■□□□□ 0.09
MCF2L-209ENST00000397036 AMNQ9BXJ7 453 aa15.62■□□□□ 0.09
MCF2L-209ENST00000397036 RANBP17Q9H2T7 1088 aaKnown RBP15.62■□□□□ 0.09
MCF2L-209ENST00000397036 TFIP11Q9UBB9 837 aaKnown RBP15.62■□□□□ 0.09
MCF2L-209ENST00000397036 FZD1Q9UP38 647 aa15.62■□□□□ 0.09
MCF2L-209ENST00000397036 DOCK1Q14185 1865 aa15.62■□□□□ 0.09
MCF2L-209ENST00000397036 SMCO2A6NFE2 343 aa15.61■□□□□ 0.09
MCF2L-209ENST00000397036 SPDYE5A6NIY4 337 aa15.61■□□□□ 0.09
MCF2L-209ENST00000397036 PPP1R11O60927 126 aaPredicted RBP15.61■□□□□ 0.09
MCF2L-209ENST00000397036 VCAM1P19320 739 aa15.61■□□□□ 0.09
MCF2L-209ENST00000397036 NCLP19338 710 aaKnown RBP15.61■□□□□ 0.09
MCF2L-209ENST00000397036 IKQ13123 557 aaPredicted RBP15.61■□□□□ 0.09
MCF2L-209ENST00000397036 NR5A1Q13285 461 aa15.61■□□□□ 0.09
MCF2L-209ENST00000397036 FOXD4L6Q3SYB3 417 aaPredicted RBP15.61■□□□□ 0.09
MCF2L-209ENST00000397036 MAP1SQ66K74 1059 aaPredicted RBP15.61■□□□□ 0.09
MCF2L-209ENST00000397036 MCTP2Q6DN12 878 aa15.61■□□□□ 0.09
MCF2L-209ENST00000397036 FOXD4L3Q6VB84 417 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms