RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 NAA15Q9BXJ9 866 aaKnown RBP10.44□□□□□ -0.74
CDRT1-203ENST00000395667 VPS16Q9H269 839 aa10.44□□□□□ -0.74
CDRT1-203ENST00000395667 ZNF287Q9HBT7 754 aa10.44□□□□□ -0.74
CDRT1-203ENST00000395667 LZTFL1Q9NQ48 299 aa10.44□□□□□ -0.74
CDRT1-203ENST00000395667 ARGLU1Q9NWB6 273 aaPredicted RBP10.44□□□□□ -0.74
CDRT1-203ENST00000395667 IRS2Q9Y4H2 1338 aa10.44□□□□□ -0.74
CDRT1-203ENST00000395667 MFAP3LO75121 409 aa10.44□□□□□ -0.74
CDRT1-203ENST00000395667 DMTNQ08495 405 aa10.44□□□□□ -0.74
CDRT1-203ENST00000395667 C4orf32Q8N8J7 132 aa10.44□□□□□ -0.74
CDRT1-203ENST00000395667 CCDC12Q8WUD4 166 aaPredicted RBP10.44□□□□□ -0.74
CDRT1-203ENST00000395667 TMEM47Q9BQJ4 181 aa10.44□□□□□ -0.74
CDRT1-203ENST00000395667 DISC1Q9NRI5 854 aa10.44□□□□□ -0.74
CDRT1-203ENST00000395667 TAB2Q9NYJ8 693 aa10.44□□□□□ -0.74
CDRT1-203ENST00000395667 H2AFXP16104 143 aaPredicted RBP10.43□□□□□ -0.74
CDRT1-203ENST00000395667 PBX1P40424 430 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 PLIN2Q99541 437 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 MRPL44Q9H9J2 332 aaKnown RBP10.43□□□□□ -0.74
CDRT1-203ENST00000395667 PCDHA6Q9UN73 950 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 GDAQ9Y2T3 454 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 PCDHA8Q9Y5H6 950 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 COL24A1Q17RW2 1714 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 PP2D1A8MPX8 630 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 EFCAB8A8MWE9 144 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 KCNJ18B7U540 433 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 KLRF2D3W0D1 207 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 CYTH3O43739 400 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 TADA3O75528 432 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 UFL1O94874 794 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 BTDP43251 543 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 PPP4CP60510 307 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 KCNJ12Q14500 433 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 GALNT17Q6IS24 598 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 RAD9BQ6WBX8 426 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 NUP88Q99567 741 aaPredicted RBP10.43□□□□□ -0.74
CDRT1-203ENST00000395667 GTPBP4Q9BZE4 634 aaKnown RBP10.43□□□□□ -0.74
CDRT1-203ENST00000395667 TMEM60Q9H2L4 133 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 BARHL2Q9NY43 387 aa10.43□□□□□ -0.74
CDRT1-203ENST00000395667 BTAF1O14981 1849 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 ROBO3Q96MS0 1386 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 PES1O00541 588 aaKnown RBP10.42□□□□□ -0.74
CDRT1-203ENST00000395667 GYPCP04921 128 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 RASA1P20936 1047 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 PRCPP42785 496 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 CLCN6P51797 869 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 COPB1P53618 953 aaKnown RBP10.42□□□□□ -0.74
CDRT1-203ENST00000395667 NAPAP54920 295 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 PPP2R3AQ06190 1150 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 FAM196AQ6ZSG2 479 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 TEX11Q8IYF3 940 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 EYA3Q99504 573 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 CPVLQ9H3G5 476 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 TCP11L1Q9NUJ3 509 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 LIMA1Q9UHB6 759 aaKnown RBP10.42□□□□□ -0.74
CDRT1-203ENST00000395667 ADGRG1Q9Y653 693 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 STXBP3O00186 592 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 KIF5CO60282 957 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 IGSF3O75054 1194 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 FXR1P51114 621 aaKnown RBP eCLIP10.42□□□□□ -0.74
CDRT1-203ENST00000395667 MAP3K9P80192 1104 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 BMS1Q14692 1282 aaKnown RBP10.42□□□□□ -0.74
CDRT1-203ENST00000395667 SLC35G1Q2M3R5 365 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 TCP11X2Q5H9J9 407 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 CCDC51Q96ER9 411 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 LZTS2Q9BRK4 669 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 IRX2Q9BZI1 471 aaPredicted RBP10.42□□□□□ -0.74
CDRT1-203ENST00000395667 ZNF446Q9NWS9 450 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 ITIH6Q6UXX5 1313 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 PALM3A6NDB9 673 aaPredicted RBP10.42□□□□□ -0.74
CDRT1-203ENST00000395667 PARP1P09874 1014 aaKnown RBP10.42□□□□□ -0.74
CDRT1-203ENST00000395667 CDK8P49336 464 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 GPSM2P81274 684 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 STIM1Q13586 685 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 TEX35Q5T0J7 233 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 TMCO3Q6UWJ1 677 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 DAGLBQ8NCG7 672 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 RTFDC1Q9BY42 306 aaPredicted RBP10.42□□□□□ -0.74
CDRT1-203ENST00000395667 VAT1LQ9HCJ6 419 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 USP21Q9UK80 565 aa10.42□□□□□ -0.74
CDRT1-203ENST00000395667 TNRC6CQ9HCJ0 1690 aaKnown RBP10.41□□□□□ -0.74
CDRT1-203ENST00000395667 M0R2N6 131 aa10.41□□□□□ -0.74
CDRT1-203ENST00000395667 UBXN1Q04323 297 aa10.41□□□□□ -0.74
CDRT1-203ENST00000395667 LETM2Q2VYF4 491 aa10.41□□□□□ -0.74
CDRT1-203ENST00000395667 UTP14CQ5TAP6 766 aaKnown RBP10.41□□□□□ -0.74
CDRT1-203ENST00000395667 RASGRP2Q7LDG7 609 aa10.41□□□□□ -0.74
CDRT1-203ENST00000395667 KIFC2Q96AC6 838 aa10.41□□□□□ -0.74
CDRT1-203ENST00000395667 CD209Q9NNX6 404 aa10.41□□□□□ -0.74
CDRT1-203ENST00000395667 SEC63Q9UGP8 760 aaKnown RBP10.41□□□□□ -0.74
CDRT1-203ENST00000395667 MRFAP1Q9Y605 127 aa10.41□□□□□ -0.74
CDRT1-203ENST00000395667 LTBP4Q8N2S1 1624 aa10.41□□□□□ -0.74
CDRT1-203ENST00000395667 MYH8P13535 1937 aa10.41□□□□□ -0.74
CDRT1-203ENST00000395667 TRIM49BA6NDI0 452 aa10.41□□□□□ -0.74
CDRT1-203ENST00000395667 LRRC10BA6NIK2 292 aa10.41□□□□□ -0.74
CDRT1-203ENST00000395667 H7C1D1 291 aa10.41□□□□□ -0.74
CDRT1-203ENST00000395667 SOGA3Q5TF21 947 aa10.41□□□□□ -0.74
CDRT1-203ENST00000395667 CERS3Q8IU89 383 aa10.41□□□□□ -0.74
CDRT1-203ENST00000395667 GGA1Q9UJY5 639 aa10.41□□□□□ -0.74
CDRT1-203ENST00000395667 LAD1O00515 517 aa10.4□□□□□ -0.74
CDRT1-203ENST00000395667 ZBTB22O15209 634 aa10.4□□□□□ -0.74
CDRT1-203ENST00000395667 CCNT1O60563 726 aaKnown RBP10.4□□□□□ -0.74
CDRT1-203ENST00000395667 NAALADL2Q58DX5 795 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms