RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SH2B2O14492 632 aaPredicted RBP23.32■■□□□ 1.32
SNCA-203ENST00000394986 CCNA1P78396 465 aa23.32■■□□□ 1.32
SNCA-203ENST00000394986 C8orf34Q49A92 452 aa23.32■■□□□ 1.32
SNCA-203ENST00000394986 CCAR1Q8IX12 1150 aaKnown RBP23.32■■□□□ 1.32
SNCA-203ENST00000394986 CHURC1Q8WUH1 139 aa23.32■■□□□ 1.32
SNCA-203ENST00000394986 CPVLQ9H3G5 476 aa23.32■■□□□ 1.32
SNCA-203ENST00000394986 SLC38A10Q9HBR0 1119 aa23.32■■□□□ 1.32
SNCA-203ENST00000394986 ZNF214Q9UL59 606 aaPredicted RBP23.32■■□□□ 1.32
SNCA-203ENST00000394986 PRR12Q9ULL5 1215 aa23.32■■□□□ 1.32
SNCA-203ENST00000394986 EPB41L2O43491 1005 aaKnown RBP23.31■■□□□ 1.32
SNCA-203ENST00000394986 GNRH1P01148 92 aa23.31■■□□□ 1.32
SNCA-203ENST00000394986 MAPK4P31152 587 aa23.31■■□□□ 1.32
SNCA-203ENST00000394986 FBXO46Q6PJ61 603 aaPredicted RBP23.31■■□□□ 1.32
SNCA-203ENST00000394986 GPR142Q7Z601 462 aa23.31■■□□□ 1.32
SNCA-203ENST00000394986 COA7Q96BR5 231 aa23.31■■□□□ 1.32
SNCA-203ENST00000394986 RAVER2Q9HCJ3 691 aaKnown RBP23.31■■□□□ 1.32
SNCA-203ENST00000394986 PLA2G6O60733 806 aa23.3■■□□□ 1.32
SNCA-203ENST00000394986 ZBED4O75132 1171 aa23.3■■□□□ 1.32
SNCA-203ENST00000394986 ERCC3P19447 782 aa23.3■■□□□ 1.32
SNCA-203ENST00000394986 PKN2Q16513 984 aaKnown RBP23.3■■□□□ 1.32
SNCA-203ENST00000394986 SYDE2Q5VT97 1194 aa23.3■■□□□ 1.32
SNCA-203ENST00000394986 CPXCR1Q8N123 301 aa23.3■■□□□ 1.32
SNCA-203ENST00000394986 TMEM87BQ96K49 555 aa23.3■■□□□ 1.32
SNCA-203ENST00000394986 CWC22Q9HCG8 908 aaKnown RBP23.3■■□□□ 1.32
SNCA-203ENST00000394986 HOXD10P28358 340 aa23.29■■□□□ 1.32
SNCA-203ENST00000394986 STAT3P40763 770 aa23.29■■□□□ 1.32
SNCA-203ENST00000394986 SLC4A3P48751 1232 aa23.29■■□□□ 1.32
SNCA-203ENST00000394986 FLT3LGP49771 235 aa23.29■■□□□ 1.32
SNCA-203ENST00000394986 EXOSC10Q01780 885 aaKnown RBP23.29■■□□□ 1.32
SNCA-203ENST00000394986 BTNL9Q6UXG8 535 aa23.29■■□□□ 1.32
SNCA-203ENST00000394986 DHX32Q7L7V1 743 aaKnown RBP23.29■■□□□ 1.32
SNCA-203ENST00000394986 PLEKHH3Q7Z736 793 aa23.29■■□□□ 1.32
SNCA-203ENST00000394986 NCAPG2Q86XI2 1143 aa23.29■■□□□ 1.32
SNCA-203ENST00000394986 STAG2Q8N3U4 1231 aa23.29■■□□□ 1.32
SNCA-203ENST00000394986 MYL10Q9BUA6 226 aa23.29■■□□□ 1.32
SNCA-203ENST00000394986 UBA5Q9GZZ9 404 aa23.29■■□□□ 1.32
SNCA-203ENST00000394986 CTDP1Q9Y5B0 961 aaPredicted RBP23.29■■□□□ 1.32
SNCA-203ENST00000394986 HTTP42858 3142 aa23.28■■□□□ 1.32
SNCA-203ENST00000394986 PARP1P09874 1014 aaKnown RBP23.28■■□□□ 1.32
SNCA-203ENST00000394986 TAL1P17542 331 aaPredicted RBP23.28■■□□□ 1.32
SNCA-203ENST00000394986 GPATCH4Q5T3I0 446 aaKnown RBP23.28■■□□□ 1.32
SNCA-203ENST00000394986 SNRNP48Q6IEG0 339 aaKnown RBP23.28■■□□□ 1.32
SNCA-203ENST00000394986 CCDC174Q6PII3 467 aa23.28■■□□□ 1.32
SNCA-203ENST00000394986 MTA3Q9BTC8 594 aa23.28■■□□□ 1.32
SNCA-203ENST00000394986 HPS5Q9UPZ3 1129 aa23.28■■□□□ 1.32
SNCA-203ENST00000394986 MGAMO43451 1857 aa23.28■■□□□ 1.32
SNCA-203ENST00000394986 ZNF536O15090 1300 aa23.27■■□□□ 1.32
SNCA-203ENST00000394986 COL11A1P12107 1806 aaPredicted RBP23.27■■□□□ 1.32
SNCA-203ENST00000394986 ASPRV1Q53RT3 343 aa23.27■■□□□ 1.32
SNCA-203ENST00000394986 NFXL1Q6ZNB6 911 aa23.27■■□□□ 1.32
SNCA-203ENST00000394986 CATIPQ7Z7H3 387 aa23.27■■□□□ 1.32
SNCA-203ENST00000394986 RAB11FIP4Q86YS3 637 aa23.27■■□□□ 1.32
SNCA-203ENST00000394986 TEX13BQ9BXU2 312 aa23.27■■□□□ 1.32
SNCA-203ENST00000394986 GJD2Q9UKL4 321 aa23.27■■□□□ 1.32
SNCA-203ENST00000394986 RIPK3Q9Y572 518 aa23.27■■□□□ 1.32
SNCA-203ENST00000394986 CASTP20810 708 aaKnown RBP23.26■■□□□ 1.31
SNCA-203ENST00000394986 TROAPQ12815 778 aa23.26■■□□□ 1.31
SNCA-203ENST00000394986 RIOX2Q8IUF8 465 aa23.26■■□□□ 1.31
SNCA-203ENST00000394986 ZNF654Q8IZM8 581 aa23.26■■□□□ 1.31
SNCA-203ENST00000394986 SHCBP1Q8NEM2 672 aa23.26■■□□□ 1.31
SNCA-203ENST00000394986 RAET1EQ8TD07 263 aa23.26■■□□□ 1.31
SNCA-203ENST00000394986 NUP133Q8WUM0 1156 aa23.26■■□□□ 1.31
SNCA-203ENST00000394986 ABHD8Q96I13 439 aa23.26■■□□□ 1.31
SNCA-203ENST00000394986 AGBL1Q96MI9 1066 aa23.26■■□□□ 1.31
SNCA-203ENST00000394986 MAD2L2Q9UI95 211 aa23.26■■□□□ 1.31
SNCA-203ENST00000394986 WDR19Q8NEZ3 1342 aa23.25■■□□□ 1.31
SNCA-203ENST00000394986 CCDC69A6NI79 296 aa23.25■■□□□ 1.31
SNCA-203ENST00000394986 LIFRP42702 1097 aa23.25■■□□□ 1.31
SNCA-203ENST00000394986 PRMT2P55345 433 aa23.25■■□□□ 1.31
SNCA-203ENST00000394986 GRM4Q14833 912 aa23.25■■□□□ 1.31
SNCA-203ENST00000394986 BLOC1S2Q6QNY1 142 aa23.25■■□□□ 1.31
SNCA-203ENST00000394986 RANBP17Q9H2T7 1088 aaKnown RBP23.25■■□□□ 1.31
SNCA-203ENST00000394986 ATP2A1O14983 1001 aa23.25■■□□□ 1.31
SNCA-203ENST00000394986 SLC25A27O95847 323 aa23.25■■□□□ 1.31
SNCA-203ENST00000394986 HMGB1P09429 215 aaKnown RBP23.25■■□□□ 1.31
SNCA-203ENST00000394986 RXRAP19793 462 aa23.25■■□□□ 1.31
SNCA-203ENST00000394986 CYP2B6P20813 491 aa23.25■■□□□ 1.31
SNCA-203ENST00000394986 PTPREP23469 700 aa23.25■■□□□ 1.31
SNCA-203ENST00000394986 MORN1Q5T089 497 aa23.25■■□□□ 1.31
SNCA-203ENST00000394986 SH3TC2Q8TF17 1288 aa23.25■■□□□ 1.31
SNCA-203ENST00000394986 MROH8Q9H579 483 aa23.25■■□□□ 1.31
SNCA-203ENST00000394986 IVNS1ABPQ9Y6Y0 642 aa23.25■■□□□ 1.31
SNCA-203ENST00000394986 PALM3A6NDB9 673 aaPredicted RBP23.24■■□□□ 1.31
SNCA-203ENST00000394986 FDX1P10109 184 aa23.24■■□□□ 1.31
SNCA-203ENST00000394986 ELNP15502 786 aa23.24■■□□□ 1.31
SNCA-203ENST00000394986 RPS6KB1P23443 525 aa23.24■■□□□ 1.31
SNCA-203ENST00000394986 NUDT12Q9BQG2 462 aa23.24■■□□□ 1.31
SNCA-203ENST00000394986 HOMER2Q9NSB8 354 aa23.24■■□□□ 1.31
SNCA-203ENST00000394986 DDAH1O94760 285 aa23.23■■□□□ 1.31
SNCA-203ENST00000394986 PSMA5P28066 241 aa23.23■■□□□ 1.31
SNCA-203ENST00000394986 OAZ1P54368 228 aa23.23■■□□□ 1.31
SNCA-203ENST00000394986 GRB14Q14449 540 aa23.23■■□□□ 1.31
SNCA-203ENST00000394986 SLC35G1Q2M3R5 365 aa23.23■■□□□ 1.31
SNCA-203ENST00000394986 CCDC144CPQ8IYA2 1237 aa23.23■■□□□ 1.31
SNCA-203ENST00000394986 ADGRF4Q8IZF3 695 aa23.23■■□□□ 1.31
SNCA-203ENST00000394986 SOCS4Q8WXH5 440 aa23.23■■□□□ 1.31
SNCA-203ENST00000394986 USP6NLQ92738 828 aa23.23■■□□□ 1.31
SNCA-203ENST00000394986 UPF3BQ9BZI7 483 aaKnown RBP23.23■■□□□ 1.31
SNCA-203ENST00000394986 PLXNB2O15031 1838 aa23.22■■□□□ 1.31
SNCA-203ENST00000394986 SLC15A5A6NIM6 579 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms